Sequence filename : 				 /auto/dufayard/res/2.4.5/proteic_M1373_23x392_2003.phy
Data type :             			 aa
Sequence format : 				 interleaved
Number of data sets : 				 1
Nb of bootstrapped data sets : 			 0
Model name : 					 WAG
Proportion of invariable sites :		 0.000000
Number of subst. rate categs : 			 4
Gamma distribution parameter : 			 estimated
Starting tree : 				 BIONJ
Optimise tree topology : 			 yes
Optimise branch lengths and rate parameters : 	 yes

. Compressing sequences...

. Computing pairwise distances...

. Building BIONJ tree...

. Nbytes = 11976016

. Log(lk) :               * ->    -3609.560927 
. Log(lk) :    -3609.560927 ->    -3581.508075   3 swaps done 
. Log(lk) :    -3581.508075 ->    -3577.725529   1 swap  done
. Log(lk) :    -3577.725529 ->    -3577.348086   0 swap  done

. Optimisation of the gamma shape parameter...

. Log(lk) :    -3540.669302 ->    -3539.840078   1 swap  done
. Log(lk) :    -3539.840078 ->    -3539.634791   0 swap  done
. Log(lk) :    -3539.634791 ->    -3539.556185   0 swap  done
. Log(lk) :    -3539.556185 ->    -3539.523859   0 swap  done

. Optimisation of the gamma shape parameter...

. Log(lk) :    -3539.523853 ->    -3539.510142   0 swap  done
. Log(lk) :    -3539.510142 ->    -3539.504228   0 swap  done
. Log(lk) :    -3539.504228 ->    -3539.501656   0 swap  done

. Last optimization step...

. Log(lk) :               * ->    -3539.500053 

. Optimisation of the gamma shape parameter...

. Log(lk) :    -3539.500053 ->    -3539.499664 

. Optimisation of the gamma shape parameter...

. Log(lk) :    -3539.499664 ->    -3539.499599 

. Optimisation of the gamma shape parameter...

. Log(lk) :    -3539.499599 ->    -3539.499589 

. Optimisation of the gamma shape parameter...

. Log(lk) :    -3539.499589 ->    -3539.499588 

. Optimisation of the gamma shape parameter...

. Log(lk) :    -3539.499588 ->    -3539.499587 

. Optimisation of the gamma shape parameter...

. Final Log(lk) : -3539.499587 

. Time used 0h1m2s

%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

60.73user 0.00system 1:01.70elapsed 98%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+0minor)pagefaults 0swaps