Sequence filename : 				 /auto/dufayard/res/2.4.5/proteic_M1378_18x1561_2003.phy
Data type :             			 aa
Sequence format : 				 interleaved
Number of data sets : 				 1
Nb of bootstrapped data sets : 			 0
Model name : 					 WAG
Proportion of invariable sites :		 0.000000
Number of subst. rate categs : 			 4
Gamma distribution parameter : 			 estimated
Starting tree : 				 BIONJ
Optimise tree topology : 			 yes
Optimise branch lengths and rate parameters : 	 yes

. Compressing sequences...

. Computing pairwise distances...

. Building BIONJ tree...

. Nbytes = 38146680

. Log(lk) :               * ->   -16517.318019 
. Log(lk) :   -16517.318019 ->   -16346.170438   2 swaps done 
. Log(lk) :   -16346.170438 ->   -16313.008721   3 swaps done 
. Log(lk) :   -16313.008721 ->   -16299.468585   3 swaps done 

. Optimisation of the gamma shape parameter...

. Log(lk) :   -16074.867371 ->   -16060.738923   3 swaps done 
. Log(lk) :   -16060.738923 ->   -16052.430689   1 swap  done
. Log(lk) :   -16052.430689 ->   -16050.346410   2 swaps done 
. Log(lk) :   -16050.346410 ->   -16049.634226   0 swap  done

. Optimisation of the gamma shape parameter...

. Log(lk) :   -16049.627064 ->   -16049.539256   0 swap  done
. Log(lk) :   -16049.539256 ->   -16049.513792   0 swap  done
. Log(lk) :   -16049.513792 ->   -16049.504881   0 swap  done
. Log(lk) :   -16049.504881 ->   -16049.501507   0 swap  done

. Optimisation of the gamma shape parameter...

. Log(lk) :   -16049.500518 ->   -16049.498931   0 swap  done

. Last optimization step...

. Log(lk) :               * ->   -16049.498019 

. Optimisation of the gamma shape parameter...

. Log(lk) :   -16049.498019 ->   -16049.497786 

. Optimisation of the gamma shape parameter...

. Log(lk) :   -16049.497786 ->   -16049.497750 

. Optimisation of the gamma shape parameter...

. Log(lk) :   -16049.497750 ->   -16049.497744 

. Optimisation of the gamma shape parameter...

. Log(lk) :   -16049.497744 ->   -16049.497743 

. Optimisation of the gamma shape parameter...

. Log(lk) :   -16049.497743 ->   -16049.497743 

. Optimisation of the gamma shape parameter...

. Final Log(lk) : -16049.497743 

. Time used 0h2m56s

%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

175.28user 0.00system 2:56.03elapsed 99%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+0minor)pagefaults 0swaps