Sequence filename : 				 /auto/dufayard/res/2.4.5/proteic_M1382_9x1560_2003.phy
Data type :             			 aa
Sequence format : 				 interleaved
Number of data sets : 				 1
Nb of bootstrapped data sets : 			 0
Model name : 					 WAG
Proportion of invariable sites :		 0.000000
Number of subst. rate categs : 			 4
Gamma distribution parameter : 			 estimated
Starting tree : 				 BIONJ
Optimise tree topology : 			 yes
Optimise branch lengths and rate parameters : 	 yes

. Compressing sequences...

. Computing pairwise distances...

. Building BIONJ tree...

. Nbytes = 14581320

. Log(lk) :               * ->   -12501.324562 
. Log(lk) :   -12501.324562 ->   -12454.081037   1 swap  done
. Log(lk) :   -12454.081037 ->   -12451.367878   1 swap  done
. Log(lk) :   -12451.367878 ->   -12437.286760   1 swap  done

. Optimisation of the gamma shape parameter...

. Log(lk) :   -12345.578591 ->   -12336.425259   0 swap  done
. Log(lk) :   -12336.425259 ->   -12335.489569   0 swap  done
. Log(lk) :   -12335.489569 ->   -12335.271090   0 swap  done
. Log(lk) :   -12335.271090 ->   -12335.210757   0 swap  done

. Optimisation of the gamma shape parameter...

. Log(lk) :   -12335.209012 ->   -12335.191451   0 swap  done
. Log(lk) :   -12335.191451 ->   -12335.186250   0 swap  done

. Last optimization step...

. Log(lk) :               * ->   -12335.184245 

. Optimisation of the gamma shape parameter...

. Log(lk) :   -12335.184245 ->   -12335.183979 

. Optimisation of the gamma shape parameter...

. Log(lk) :   -12335.183979 ->   -12335.183959 

. Optimisation of the gamma shape parameter...

. Log(lk) :   -12335.183959 ->   -12335.183957 

. Optimisation of the gamma shape parameter...

. Log(lk) :   -12335.183957 ->   -12335.183956 

. Optimisation of the gamma shape parameter...

. Final Log(lk) : -12335.183956 

. Time used 0h0m48s

%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

47.47user 0.00system 0:47.72elapsed 99%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+0minor)pagefaults 0swaps