Sequence filename : 				 /auto/dufayard/res/2.4.5/proteic_M1499_22x513_2003.phy
Data type :             			 aa
Sequence format : 				 interleaved
Number of data sets : 				 1
Nb of bootstrapped data sets : 			 0
Model name : 					 WAG
Proportion of invariable sites :		 0.000000
Number of subst. rate categs : 			 4
Gamma distribution parameter : 			 estimated
Starting tree : 				 BIONJ
Optimise tree topology : 			 yes
Optimise branch lengths and rate parameters : 	 yes

. Compressing sequences...

. Computing pairwise distances...

. Building BIONJ tree...

. Nbytes = 24390080

. Log(lk) :               * ->   -12617.083689 
. Log(lk) :   -12617.083689 ->   -12525.937663   1 swap  done
. Log(lk) :   -12525.937663 ->   -12515.516736   1 swap  done
. Log(lk) :   -12515.516736 ->   -12513.779388   0 swap  done

. Optimisation of the gamma shape parameter...

. Log(lk) :   -12472.657257 ->   -12472.057044   0 swap  done
. Log(lk) :   -12472.057044 ->   -12471.860049   0 swap  done
. Log(lk) :   -12471.860049 ->   -12471.761135   0 swap  done
. Log(lk) :   -12471.761135 ->   -12471.707426   0 swap  done

. Optimisation of the gamma shape parameter...

. Log(lk) :   -12471.707403 ->   -12471.677412   0 swap  done

. Last optimization step...

. Log(lk) :               * ->   -12471.651500 

. Optimisation of the gamma shape parameter...

. Log(lk) :   -12471.651500 ->   -12471.642028 

. Optimisation of the gamma shape parameter...

. Log(lk) :   -12471.642028 ->   -12471.639270 

. Optimisation of the gamma shape parameter...

. Log(lk) :   -12471.639270 ->   -12471.638538 

. Optimisation of the gamma shape parameter...

. Log(lk) :   -12471.638538 ->   -12471.638315 

. Optimisation of the gamma shape parameter...

. Log(lk) :   -12471.638315 ->   -12471.638255 

. Optimisation of the gamma shape parameter...

. Log(lk) :   -12471.638255 ->   -12471.638236 

. Optimisation of the gamma shape parameter...

. Log(lk) :   -12471.638236 ->   -12471.638232 

. Optimisation of the gamma shape parameter...

. Log(lk) :   -12471.638232 ->   -12471.638230 

. Optimisation of the gamma shape parameter...

. Log(lk) :   -12471.638230 ->   -12471.638230 

. Optimisation of the gamma shape parameter...

. Final Log(lk) : -12471.638230 

. Time used 0h1m46s

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102.39user 0.00system 1:45.37elapsed 97%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+0minor)pagefaults 0swaps