Sequence filename : 				 /auto/dufayard/res/2.4.5/proteic_M1503_23x479_2003.phy
Data type :             			 aa
Sequence format : 				 interleaved
Number of data sets : 				 1
Nb of bootstrapped data sets : 			 0
Model name : 					 WAG
Proportion of invariable sites :		 0.000000
Number of subst. rate categs : 			 4
Gamma distribution parameter : 			 estimated
Starting tree : 				 BIONJ
Optimise tree topology : 			 yes
Optimise branch lengths and rate parameters : 	 yes

. Compressing sequences...

. Computing pairwise distances...

. Building BIONJ tree...

. Nbytes = 20696416

. Log(lk) :               * ->   -10085.980928 
. Log(lk) :   -10085.980928 ->    -9984.340851   2 swaps done 
. Log(lk) :    -9984.340851 ->    -9976.654288   1 swap  done
. Log(lk) :    -9976.654288 ->    -9975.298743   0 swap  done

. Optimisation of the gamma shape parameter...

. Log(lk) :    -9853.226205 ->    -9851.678247   1 swap  done
. Log(lk) :    -9851.678247 ->    -9851.324205   0 swap  done
. Log(lk) :    -9851.324205 ->    -9851.269918   0 swap  done
. Log(lk) :    -9851.269918 ->    -9851.256511   0 swap  done

. Optimisation of the gamma shape parameter...

. Log(lk) :    -9851.099257 ->    -9851.064872   0 swap  done
. Log(lk) :    -9851.064872 ->    -9851.052079   0 swap  done
. Log(lk) :    -9851.052079 ->    -9851.046641   0 swap  done

. Last optimization step...

. Log(lk) :               * ->    -9851.043181 

. Optimisation of the gamma shape parameter...

. Log(lk) :    -9851.043181 ->    -9851.033555 

. Optimisation of the gamma shape parameter...

. Log(lk) :    -9851.033555 ->    -9851.031292 

. Optimisation of the gamma shape parameter...

. Log(lk) :    -9851.031292 ->    -9851.030635 

. Optimisation of the gamma shape parameter...

. Log(lk) :    -9851.030635 ->    -9851.030447 

. Optimisation of the gamma shape parameter...

. Log(lk) :    -9851.030447 ->    -9851.030395 

. Optimisation of the gamma shape parameter...

. Log(lk) :    -9851.030395 ->    -9851.030381 

. Optimisation of the gamma shape parameter...

. Log(lk) :    -9851.030381 ->    -9851.030377 

. Optimisation of the gamma shape parameter...

. Log(lk) :    -9851.030377 ->    -9851.030376 

. Optimisation of the gamma shape parameter...

. Log(lk) :    -9851.030376 ->    -9851.030375 

. Optimisation of the gamma shape parameter...

. Final Log(lk) : -9851.030375 

. Time used 0h1m44s

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103.99user 0.00system 1:44.39elapsed 99%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+0minor)pagefaults 0swaps