Sequence filename : 				 /auto/dufayard/res/2.4.5/proteic_M1768_31x228_2004.phy
Data type :             			 aa
Sequence format : 				 interleaved
Number of data sets : 				 1
Nb of bootstrapped data sets : 			 0
Model name : 					 WAG
Proportion of invariable sites :		 0.000000
Number of subst. rate categs : 			 4
Gamma distribution parameter : 			 estimated
Starting tree : 				 BIONJ
Optimise tree topology : 			 yes
Optimise branch lengths and rate parameters : 	 yes

. Compressing sequences...

. Computing pairwise distances...

. Building BIONJ tree...

. Nbytes = 4786080

. Log(lk) :               * ->    -1054.718377 
. Log(lk) :    -1054.718377 ->    -1053.658027   5 swaps done 
. Log(lk) :    -1053.658027 ->    -1053.462767   5 swaps done 
. Log(lk) :    -1053.462767 ->    -1053.394779   3 swaps done 

. Optimisation of the gamma shape parameter...

. Log(lk) :    -1052.633631 ->    -1052.584767   1 swap  done
. Log(lk) :    -1052.584767 ->    -1052.566522   1 swap  done
. Log(lk) :    -1052.566522 ->    -1052.558457   0 swap  done
. Log(lk) :    -1052.558457 ->    -1052.552853   2 swaps done 

. Optimisation of the gamma shape parameter...

. Log(lk) :    -1052.552765 ->    -1052.547388   0 swap  done
. Log(lk) :    -1052.547388 ->    -1052.543137   0 swap  done
. Log(lk) :    -1052.543137 ->    -1052.541673   0 swap  done
. Log(lk) :    -1052.541673 ->    -1052.541281   0 swap  done

. Last optimization step...

. Log(lk) :               * ->    -1052.541135 

. Optimisation of the gamma shape parameter...

. Log(lk) :    -1052.541135 ->    -1052.541120 

. Optimisation of the gamma shape parameter...

. Log(lk) :    -1052.541120 ->    -1052.541120 

. Optimisation of the gamma shape parameter...

. Final Log(lk) : -1052.541120 

. Time used 0h0m27s

%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

27.64user 0.00system 0:27.80elapsed 99%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+0minor)pagefaults 0swaps