Sequence filename : 				 /auto/dufayard/res/2.4.5/proteic_M2476_30x719_2005.phy
Data type :             			 aa
Sequence format : 				 interleaved
Number of data sets : 				 1
Nb of bootstrapped data sets : 			 0
Model name : 					 WAG
Proportion of invariable sites :		 0.000000
Number of subst. rate categs : 			 4
Gamma distribution parameter : 			 estimated
Starting tree : 				 BIONJ
Optimise tree topology : 			 yes
Optimise branch lengths and rate parameters : 	 yes

. Compressing sequences...

. Computing pairwise distances...

. Building BIONJ tree...

. Nbytes = 47779680

. Log(lk) :               * ->   -25073.628786 
. Log(lk) :   -25073.628786 ->   -24811.866723   1 swap  done
. Log(lk) :   -24811.866723 ->   -24788.132981   0 swap  done
. Log(lk) :   -24788.132981 ->   -24783.180152   0 swap  done

. Optimisation of the gamma shape parameter...

. Log(lk) :   -24561.204909 ->   -24552.683443   0 swap  done
. Log(lk) :   -24552.683443 ->   -24550.880445   0 swap  done
. Log(lk) :   -24550.880445 ->   -24549.974077   0 swap  done
. Log(lk) :   -24549.974077 ->   -24549.445227   0 swap  done

. Last optimization step...

. Log(lk) :               * ->   -24548.936717 

. Optimisation of the gamma shape parameter...

. Log(lk) :   -24548.936717 ->   -24548.713773 

. Optimisation of the gamma shape parameter...

. Log(lk) :   -24548.713773 ->   -24548.633134 

. Optimisation of the gamma shape parameter...

. Log(lk) :   -24548.633134 ->   -24548.605092 

. Optimisation of the gamma shape parameter...

. Log(lk) :   -24548.605092 ->   -24548.592689 

. Optimisation of the gamma shape parameter...

. Log(lk) :   -24548.592689 ->   -24548.588143 

. Optimisation of the gamma shape parameter...

. Log(lk) :   -24548.588143 ->   -24548.586092 

. Optimisation of the gamma shape parameter...

. Log(lk) :   -24548.586092 ->   -24548.585336 

. Optimisation of the gamma shape parameter...

. Log(lk) :   -24548.585336 ->   -24548.584994 

. Optimisation of the gamma shape parameter...

. Log(lk) :   -24548.584994 ->   -24548.584868 

. Optimisation of the gamma shape parameter...

. Log(lk) :   -24548.584868 ->   -24548.584811 

. Optimisation of the gamma shape parameter...

. Log(lk) :   -24548.584811 ->   -24548.584790 

. Optimisation of the gamma shape parameter...

. Log(lk) :   -24548.584790 ->   -24548.584781 

. Optimisation of the gamma shape parameter...

. Log(lk) :   -24548.584781 ->   -24548.584777 

. Optimisation of the gamma shape parameter...

. Log(lk) :   -24548.584777 ->   -24548.584776 

. Optimisation of the gamma shape parameter...

. Log(lk) :   -24548.584776 ->   -24548.584775 

. Optimisation of the gamma shape parameter...

. Final Log(lk) : -24548.584775 

. Time used 0h3m54s

%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

232.89user 0.00system 3:53.73elapsed 99%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+0minor)pagefaults 0swaps