Sequence filename : 				 /auto/dufayard/res/2.4.5/proteic_M2478_30x276_2005.phy
Data type :             			 aa
Sequence format : 				 interleaved
Number of data sets : 				 1
Nb of bootstrapped data sets : 			 0
Model name : 					 WAG
Proportion of invariable sites :		 0.000000
Number of subst. rate categs : 			 4
Gamma distribution parameter : 			 estimated
Starting tree : 				 BIONJ
Optimise tree topology : 			 yes
Optimise branch lengths and rate parameters : 	 yes

. Compressing sequences...

. Computing pairwise distances...

. Building BIONJ tree...

. Nbytes = 19188936

. Log(lk) :               * ->    -8872.121119 
. Log(lk) :    -8872.121119 ->    -8789.743562   5 swaps done 
. Log(lk) :    -8789.743562 ->    -8763.041241   3 swaps done 
. Log(lk) :    -8763.041241 ->    -8760.479436   0 swap  done

. Optimisation of the gamma shape parameter...

. Log(lk) :    -8732.532114 ->    -8731.464615   0 swap  done
. Log(lk) :    -8731.464615 ->    -8731.192801   1 swap  done
. Log(lk) :    -8731.192801 ->    -8730.218773   1 swap  done
. Log(lk) :    -8730.218773 ->    -8727.736175   1 swap  done

. Optimisation of the gamma shape parameter...

. Log(lk) :    -8727.727813 ->    -8725.886601   1 swap  done
. Log(lk) :    -8725.886601 ->    -8725.498700   0 swap  done
. Log(lk) :    -8725.498700 ->    -8725.416467   0 swap  done
. Log(lk) :    -8725.416467 ->    -8725.394748   0 swap  done

. Optimisation of the gamma shape parameter...

. Log(lk) :    -8725.391956 ->    -8725.383499   0 swap  done
. Log(lk) :    -8725.383499 ->    -8725.379900   0 swap  done
. Log(lk) :    -8725.379900 ->    -8725.378156   0 swap  done

. Last optimization step...

. Log(lk) :               * ->    -8725.376791 

. Optimisation of the gamma shape parameter...

. Log(lk) :    -8725.376791 ->    -8725.375579 

. Optimisation of the gamma shape parameter...

. Log(lk) :    -8725.375579 ->    -8725.375274 

. Optimisation of the gamma shape parameter...

. Log(lk) :    -8725.375274 ->    -8725.375190 

. Optimisation of the gamma shape parameter...

. Log(lk) :    -8725.375190 ->    -8725.375167 

. Optimisation of the gamma shape parameter...

. Log(lk) :    -8725.375167 ->    -8725.375162 

. Optimisation of the gamma shape parameter...

. Log(lk) :    -8725.375162 ->    -8725.375160 

. Optimisation of the gamma shape parameter...

. Log(lk) :    -8725.375160 ->    -8725.375160 

. Optimisation of the gamma shape parameter...

. Final Log(lk) : -8725.375160 

. Time used 0h2m4s

%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

123.67user 0.00system 2:04.09elapsed 99%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+0minor)pagefaults 0swaps