Sequence filename : /auto/dufayard/res/2.4.5/proteic_M2640_18x243_2006.phy Data type : aa Sequence format : interleaved Number of data sets : 1 Nb of bootstrapped data sets : 0 Model name : WAG Proportion of invariable sites : 0.000000 Number of subst. rate categs : 4 Gamma distribution parameter : estimated Starting tree : BIONJ Optimise tree topology : yes Optimise branch lengths and rate parameters : yes . Compressing sequences... . Computing pairwise distances... . Building BIONJ tree... . Nbytes = 7138560 . Log(lk) : * -> -2520.889131 . Log(lk) : -2520.889131 -> -2514.342020 0 swap done . Log(lk) : -2514.342020 -> -2513.714469 0 swap done . Log(lk) : -2513.714469 -> -2513.622758 0 swap done . Optimisation of the gamma shape parameter... . Log(lk) : -2510.817956 -> -2510.779781 0 swap done . Log(lk) : -2510.779781 -> -2510.775081 0 swap done . Log(lk) : -2510.775081 -> -2510.774092 0 swap done . Last optimization step... . Log(lk) : * -> -2510.773789 . Optimisation of the gamma shape parameter... . Log(lk) : -2510.773789 -> -2510.772607 . Optimisation of the gamma shape parameter... . Log(lk) : -2510.772607 -> -2510.772540 . Optimisation of the gamma shape parameter... . Log(lk) : -2510.772540 -> -2510.772534 . Optimisation of the gamma shape parameter... . Log(lk) : -2510.772534 -> -2510.772534 . Optimisation of the gamma shape parameter... . Final Log(lk) : -2510.772534 . Time used 0h0m24s %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% 23.94user 0.00system 0:24.16elapsed 99%CPU (0avgtext+0avgdata 0maxresident)k 0inputs+0outputs (0major+0minor)pagefaults 0swaps