Sequence filename : 				 /auto/dufayard/res/2.4.5/proteic_M2641_18x326_2006.phy
Data type :             			 aa
Sequence format : 				 interleaved
Number of data sets : 				 1
Nb of bootstrapped data sets : 			 0
Model name : 					 WAG
Proportion of invariable sites :		 0.000000
Number of subst. rate categs : 			 4
Gamma distribution parameter : 			 estimated
Starting tree : 				 BIONJ
Optimise tree topology : 			 yes
Optimise branch lengths and rate parameters : 	 yes

. Compressing sequences...

. Computing pairwise distances...

. Building BIONJ tree...

. Nbytes = 10841688

. Log(lk) :               * ->    -5238.813954 
. Log(lk) :    -5238.813954 ->    -5202.353711   1 swap  done
. Log(lk) :    -5202.353711 ->    -5198.429305   0 swap  done
. Log(lk) :    -5198.429305 ->    -5197.557288   0 swap  done

. Optimisation of the gamma shape parameter...

. Log(lk) :    -5155.436284 ->    -5154.183358   1 swap  done
. Log(lk) :    -5154.183358 ->    -5153.785841   0 swap  done
. Log(lk) :    -5153.785841 ->    -5153.675117   0 swap  done
. Log(lk) :    -5153.675117 ->    -5153.627408   0 swap  done

. Optimisation of the gamma shape parameter...

. Log(lk) :    -5153.621066 ->    -5153.599793   0 swap  done
. Log(lk) :    -5153.599793 ->    -5153.589176   0 swap  done
. Log(lk) :    -5153.589176 ->    -5153.583762   0 swap  done

. Last optimization step...

. Log(lk) :               * ->    -5153.579592 

. Optimisation of the gamma shape parameter...

. Log(lk) :    -5153.579592 ->    -5153.578024 

. Optimisation of the gamma shape parameter...

. Log(lk) :    -5153.578024 ->    -5153.577638 

. Optimisation of the gamma shape parameter...

. Log(lk) :    -5153.577638 ->    -5153.577557 

. Optimisation of the gamma shape parameter...

. Log(lk) :    -5153.577557 ->    -5153.577534 

. Optimisation of the gamma shape parameter...

. Log(lk) :    -5153.577534 ->    -5153.577530 

. Optimisation of the gamma shape parameter...

. Log(lk) :    -5153.577530 ->    -5153.577528 

. Optimisation of the gamma shape parameter...

. Log(lk) :    -5153.577528 ->    -5153.577528 

. Optimisation of the gamma shape parameter...

. Final Log(lk) : -5153.577528 

. Time used 0h0m51s

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50.48user 0.00system 0:50.76elapsed 99%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+0minor)pagefaults 0swaps