Sequence filename : 				 /auto/dufayard/res/2.4.5/proteic_M2899_25x444_2006.phy
Data type :             			 aa
Sequence format : 				 interleaved
Number of data sets : 				 1
Nb of bootstrapped data sets : 			 0
Model name : 					 WAG
Proportion of invariable sites :		 0.000000
Number of subst. rate categs : 			 4
Gamma distribution parameter : 			 estimated
Starting tree : 				 BIONJ
Optimise tree topology : 			 yes
Optimise branch lengths and rate parameters : 	 yes

. Compressing sequences...

. Computing pairwise distances...

. Building BIONJ tree...

. Nbytes = 23193560

. Log(lk) :               * ->   -10193.544961 
. Log(lk) :   -10193.544961 ->   -10101.302206   3 swaps done 
. Log(lk) :   -10101.302206 ->   -10087.530217   3 swaps done 
. Log(lk) :   -10087.530217 ->   -10076.286099   1 swap  done

. Optimisation of the gamma shape parameter...

. Log(lk) :    -9967.053384 ->    -9962.797051   2 swaps done 
. Log(lk) :    -9962.797051 ->    -9961.379441   0 swap  done
. Log(lk) :    -9961.379441 ->    -9961.045770   0 swap  done
. Log(lk) :    -9961.045770 ->    -9960.861943   0 swap  done

. Optimisation of the gamma shape parameter...

. Log(lk) :    -9960.855696 ->    -9960.744593   0 swap  done
. Log(lk) :    -9960.744593 ->    -9960.674564   0 swap  done
. Log(lk) :    -9960.674564 ->    -9960.630015   0 swap  done

. Last optimization step...

. Log(lk) :               * ->    -9960.584935 

. Optimisation of the gamma shape parameter...

. Log(lk) :    -9960.584935 ->    -9960.562243 

. Optimisation of the gamma shape parameter...

. Log(lk) :    -9960.562243 ->    -9960.554766 

. Optimisation of the gamma shape parameter...

. Log(lk) :    -9960.554766 ->    -9960.552033 

. Optimisation of the gamma shape parameter...

. Log(lk) :    -9960.552033 ->    -9960.551134 

. Optimisation of the gamma shape parameter...

. Log(lk) :    -9960.551134 ->    -9960.550805 

. Optimisation of the gamma shape parameter...

. Log(lk) :    -9960.550805 ->    -9960.550697 

. Optimisation of the gamma shape parameter...

. Log(lk) :    -9960.550697 ->    -9960.550657 

. Optimisation of the gamma shape parameter...

. Log(lk) :    -9960.550657 ->    -9960.550644 

. Optimisation of the gamma shape parameter...

. Log(lk) :    -9960.550644 ->    -9960.550640 

. Optimisation of the gamma shape parameter...

. Log(lk) :    -9960.550640 ->    -9960.550638 

. Optimisation of the gamma shape parameter...

. Log(lk) :    -9960.550638 ->    -9960.550638 

. Optimisation of the gamma shape parameter...

. Final Log(lk) : -9960.550638 

. Time used 0h2m6s

%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

125.40user 0.00system 2:05.95elapsed 99%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+0minor)pagefaults 0swaps