Sequence filename : 				 /auto/dufayard/res/2.4.5/proteic_M2954_5x1006_2006.phy
Data type :             			 aa
Sequence format : 				 interleaved
Number of data sets : 				 1
Nb of bootstrapped data sets : 			 0
Model name : 					 WAG
Proportion of invariable sites :		 0.000000
Number of subst. rate categs : 			 4
Gamma distribution parameter : 			 estimated
Starting tree : 				 BIONJ
Optimise tree topology : 			 yes
Optimise branch lengths and rate parameters : 	 yes

. Compressing sequences...

. Computing pairwise distances...

. Building BIONJ tree...

. Nbytes = 804440

. Log(lk) :               * ->    -3247.716813 
. Log(lk) :    -3247.716813 ->    -3242.418696   0 swap  done
. Log(lk) :    -3242.418696 ->    -3241.834656   0 swap  done
. Log(lk) :    -3241.834656 ->    -3241.781311   0 swap  done

. Optimisation of the gamma shape parameter...

. Log(lk) :    -3241.744784 ->    -3241.740567   0 swap  done
. Log(lk) :    -3241.740567 ->    -3241.740165   0 swap  done

. Last optimization step...

. Log(lk) :               * ->    -3241.740121 

. Optimisation of the gamma shape parameter...

. Log(lk) :    -3241.740121 ->    -3241.740120 

. Optimisation of the gamma shape parameter...

. Log(lk) :    -3241.740120 ->    -3241.740120 

. Optimisation of the gamma shape parameter...

. Final Log(lk) : -3241.740120 

. Time used 0h0m2s

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2.24user 0.00system 0:02.28elapsed 98%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+0minor)pagefaults 0swaps