Sequence filename : /auto/dufayard/res/bigdatasets_2.4.5_prot/proteic_M1992_46x68_2004.phy Data type : aa Sequence format : interleaved Number of data sets : 1 Nb of bootstrapped data sets : 0 Model name : WAG Proportion of invariable sites : 0.000000 Number of subst. rate categs : 4 Gamma distribution parameter : estimated Starting tree : BIONJ Optimise tree topology : yes Optimise branch lengths and rate parameters : yes . Compressing sequences... . Computing pairwise distances... . Large distance encountered between tax9 and tax1 sequences . Large distance encountered between tax10 and tax1 sequences . Large distance encountered between tax11 and tax1 sequences . Large distance encountered between tax12 and tax1 sequences . Large distance encountered between tax36 and tax1 sequences . Large distance encountered between tax37 and tax1 sequences . Large distance encountered between tax38 and tax1 sequences . Large distance encountered between tax39 and tax1 sequences . Large distance encountered between tax40 and tax1 sequences . Large distance encountered between tax41 and tax1 sequences . Large distance encountered between tax42 and tax1 sequences . Large distance encountered between tax43 and tax1 sequences . Large distance encountered between tax44 and tax1 sequences . Large distance encountered between tax45 and tax1 sequences . Large distance encountered between tax46 and tax1 sequences . Large distance encountered between tax9 and tax2 sequences . Large distance encountered between tax10 and tax2 sequences . Large distance encountered between tax11 and tax2 sequences . Large distance encountered between tax12 and tax2 sequences . Large distance encountered between tax36 and tax2 sequences . Large distance encountered between tax37 and tax2 sequences . Large distance encountered between tax38 and tax2 sequences . Large distance encountered between tax39 and tax2 sequences . Large distance encountered between tax40 and tax2 sequences . Large distance encountered between tax41 and tax2 sequences . Large distance encountered between tax42 and tax2 sequences . Large distance encountered between tax43 and tax2 sequences . Large distance encountered between tax44 and tax2 sequences . Large distance encountered between tax45 and tax2 sequences . Large distance encountered between tax46 and tax2 sequences . Large distance encountered between tax9 and tax3 sequences . Large distance encountered between tax10 and tax3 sequences . Large distance encountered between tax11 and tax3 sequences . Large distance encountered between tax12 and tax3 sequences . Large distance encountered between tax36 and tax3 sequences . Large distance encountered between tax37 and tax3 sequences . Large distance encountered between tax38 and tax3 sequences . Large distance encountered between tax39 and tax3 sequences . Large distance encountered between tax40 and tax3 sequences . Large distance encountered between tax41 and tax3 sequences . Large distance encountered between tax42 and tax3 sequences . Large distance encountered between tax43 and tax3 sequences . Large distance encountered between tax44 and tax3 sequences . Large distance encountered between tax45 and tax3 sequences . Large distance encountered between tax46 and tax3 sequences . Large distance encountered between tax9 and tax4 sequences . Large distance encountered between tax10 and tax4 sequences . Large distance encountered between tax11 and tax4 sequences . Large distance encountered between tax12 and tax4 sequences . Large distance encountered between tax36 and tax4 sequences . Large distance encountered between tax37 and tax4 sequences . Large distance encountered between tax38 and tax4 sequences . Large distance encountered between tax39 and tax4 sequences . Large distance encountered between tax40 and tax4 sequences . Large distance encountered between tax41 and tax4 sequences . Large distance encountered between tax42 and tax4 sequences . Large distance encountered between tax43 and tax4 sequences . Large distance encountered between tax44 and tax4 sequences . Large distance encountered between tax45 and tax4 sequences . Large distance encountered between tax46 and tax4 sequences . Large distance encountered between tax9 and tax5 sequences . Large distance encountered between tax10 and tax5 sequences . Large distance encountered between tax11 and tax5 sequences . Large distance encountered between tax12 and tax5 sequences . Large distance encountered between tax36 and tax5 sequences . Large distance encountered between tax37 and tax5 sequences . Large distance encountered between tax38 and tax5 sequences . Large distance encountered between tax39 and tax5 sequences . Large distance encountered between tax40 and tax5 sequences . Large distance encountered between tax41 and tax5 sequences . Large distance encountered between tax42 and tax5 sequences . Large distance encountered between tax43 and tax5 sequences . Large distance encountered between tax44 and tax5 sequences . Large distance encountered between tax45 and tax5 sequences . Large distance encountered between tax46 and tax5 sequences . Large distance encountered between tax9 and tax6 sequences . Large distance encountered between tax10 and tax6 sequences . Large distance encountered between tax11 and tax6 sequences . Large distance encountered between tax12 and tax6 sequences . Large distance encountered between tax36 and tax6 sequences . Large distance encountered between tax37 and tax6 sequences . Large distance encountered between tax38 and tax6 sequences . Large distance encountered between tax39 and tax6 sequences . Large distance encountered between tax40 and tax6 sequences . Large distance encountered between tax41 and tax6 sequences . Large distance encountered between tax42 and tax6 sequences . Large distance encountered between tax43 and tax6 sequences . Large distance encountered between tax44 and tax6 sequences . Large distance encountered between tax45 and tax6 sequences . Large distance encountered between tax46 and tax6 sequences . Large distance encountered between tax9 and tax7 sequences . Large distance encountered between tax10 and tax7 sequences . Large distance encountered between tax11 and tax7 sequences . Large distance encountered between tax12 and tax7 sequences . Large distance encountered between tax36 and tax7 sequences . Large distance encountered between tax37 and tax7 sequences . Large distance encountered between tax38 and tax7 sequences . Large distance encountered between tax39 and tax7 sequences . Large distance encountered between tax40 and tax7 sequences . Large distance encountered between tax41 and tax7 sequences . Large distance encountered between tax42 and tax7 sequences . Large distance encountered between tax43 and tax7 sequences . Large distance encountered between tax44 and tax7 sequences . Large distance encountered between tax45 and tax7 sequences . Large distance encountered between tax46 and tax7 sequences . Large distance encountered between tax9 and tax8 sequences . Large distance encountered between tax10 and tax8 sequences . Large distance encountered between tax11 and tax8 sequences . Large distance encountered between tax12 and tax8 sequences . Large distance encountered between tax36 and tax8 sequences . Large distance encountered between tax37 and tax8 sequences . Large distance encountered between tax38 and tax8 sequences . Large distance encountered between tax39 and tax8 sequences . Large distance encountered between tax40 and tax8 sequences . Large distance encountered between tax41 and tax8 sequences . Large distance encountered between tax42 and tax8 sequences . Large distance encountered between tax43 and tax8 sequences . Large distance encountered between tax44 and tax8 sequences . Large distance encountered between tax45 and tax8 sequences . Large distance encountered between tax46 and tax8 sequences . Large distance encountered between tax13 and tax9 sequences . Large distance encountered between tax14 and tax9 sequences . Large distance encountered between tax15 and tax9 sequences . Large distance encountered between tax16 and tax9 sequences . Large distance encountered between tax17 and tax9 sequences . Large distance encountered between tax18 and tax9 sequences . Large distance encountered between tax19 and tax9 sequences . Large distance encountered between tax20 and tax9 sequences . Large distance encountered between tax21 and tax9 sequences . Large distance encountered between tax22 and tax9 sequences . Large distance encountered between tax23 and tax9 sequences . Large distance encountered between tax24 and tax9 sequences . Large distance encountered between tax25 and tax9 sequences . Large distance encountered between tax26 and tax9 sequences . Large distance encountered between tax27 and tax9 sequences . Large distance encountered between tax28 and tax9 sequences . Large distance encountered between tax29 and tax9 sequences . Large distance encountered between tax30 and tax9 sequences . Large distance encountered between tax31 and tax9 sequences . Large distance encountered between tax32 and tax9 sequences . Large distance encountered between tax33 and tax9 sequences . Large distance encountered between tax34 and tax9 sequences . Large distance encountered between tax35 and tax9 sequences . Large distance encountered between tax13 and tax10 sequences . Large distance encountered between tax14 and tax10 sequences . Large distance encountered between tax15 and tax10 sequences . Large distance encountered between tax16 and tax10 sequences . Large distance encountered between tax17 and tax10 sequences . Large distance encountered between tax18 and tax10 sequences . Large distance encountered between tax19 and tax10 sequences . Large distance encountered between tax20 and tax10 sequences . Large distance encountered between tax21 and tax10 sequences . Large distance encountered between tax22 and tax10 sequences . Large distance encountered between tax23 and tax10 sequences . Large distance encountered between tax24 and tax10 sequences . Large distance encountered between tax25 and tax10 sequences . Large distance encountered between tax26 and tax10 sequences . Large distance encountered between tax27 and tax10 sequences . Large distance encountered between tax28 and tax10 sequences . Large distance encountered between tax29 and tax10 sequences . Large distance encountered between tax30 and tax10 sequences . Large distance encountered between tax31 and tax10 sequences . Large distance encountered between tax32 and tax10 sequences . Large distance encountered between tax33 and tax10 sequences . Large distance encountered between tax34 and tax10 sequences . Large distance encountered between tax35 and tax10 sequences . Large distance encountered between tax13 and tax11 sequences . Large distance encountered between tax14 and tax11 sequences . Large distance encountered between tax15 and tax11 sequences . Large distance encountered between tax16 and tax11 sequences . Large distance encountered between tax17 and tax11 sequences . Large distance encountered between tax18 and tax11 sequences . Large distance encountered between tax19 and tax11 sequences . Large distance encountered between tax20 and tax11 sequences . Large distance encountered between tax21 and tax11 sequences . Large distance encountered between tax22 and tax11 sequences . Large distance encountered between tax23 and tax11 sequences . Large distance encountered between tax24 and tax11 sequences . Large distance encountered between tax25 and tax11 sequences . Large distance encountered between tax26 and tax11 sequences . Large distance encountered between tax27 and tax11 sequences . Large distance encountered between tax28 and tax11 sequences . Large distance encountered between tax29 and tax11 sequences . Large distance encountered between tax30 and tax11 sequences . Large distance encountered between tax31 and tax11 sequences . Large distance encountered between tax32 and tax11 sequences . Large distance encountered between tax33 and tax11 sequences . Large distance encountered between tax34 and tax11 sequences . Large distance encountered between tax35 and tax11 sequences . Large distance encountered between tax13 and tax12 sequences . Large distance encountered between tax14 and tax12 sequences . Large distance encountered between tax15 and tax12 sequences . Large distance encountered between tax16 and tax12 sequences . Large distance encountered between tax17 and tax12 sequences . Large distance encountered between tax18 and tax12 sequences . Large distance encountered between tax19 and tax12 sequences . Large distance encountered between tax20 and tax12 sequences . Large distance encountered between tax21 and tax12 sequences . Large distance encountered between tax22 and tax12 sequences . Large distance encountered between tax23 and tax12 sequences . Large distance encountered between tax24 and tax12 sequences . Large distance encountered between tax25 and tax12 sequences . Large distance encountered between tax26 and tax12 sequences . Large distance encountered between tax27 and tax12 sequences . Large distance encountered between tax28 and tax12 sequences . Large distance encountered between tax29 and tax12 sequences . Large distance encountered between tax30 and tax12 sequences . Large distance encountered between tax31 and tax12 sequences . Large distance encountered between tax32 and tax12 sequences . Large distance encountered between tax33 and tax12 sequences . Large distance encountered between tax34 and tax12 sequences . Large distance encountered between tax35 and tax12 sequences . Large distance encountered between tax36 and tax13 sequences . Large distance encountered between tax37 and tax13 sequences . Large distance encountered between tax38 and tax13 sequences . Large distance encountered between tax39 and tax13 sequences . Large distance encountered between tax40 and tax13 sequences . Large distance encountered between tax41 and tax13 sequences . Large distance encountered between tax42 and tax13 sequences . Large distance encountered between tax43 and tax13 sequences . Large distance encountered between tax44 and tax13 sequences . Large distance encountered between tax45 and tax13 sequences . Large distance encountered between tax46 and tax13 sequences . Large distance encountered between tax36 and tax14 sequences . Large distance encountered between tax37 and tax14 sequences . Large distance encountered between tax38 and tax14 sequences . Large distance encountered between tax39 and tax14 sequences . Large distance encountered between tax40 and tax14 sequences . Large distance encountered between tax41 and tax14 sequences . Large distance encountered between tax42 and tax14 sequences . Large distance encountered between tax43 and tax14 sequences . Large distance encountered between tax44 and tax14 sequences . Large distance encountered between tax45 and tax14 sequences . Large distance encountered between tax46 and tax14 sequences . Large distance encountered between tax36 and tax15 sequences . Large distance encountered between tax37 and tax15 sequences . Large distance encountered between tax38 and tax15 sequences . Large distance encountered between tax39 and tax15 sequences . Large distance encountered between tax40 and tax15 sequences . Large distance encountered between tax41 and tax15 sequences . Large distance encountered between tax42 and tax15 sequences . Large distance encountered between tax43 and tax15 sequences . Large distance encountered between tax44 and tax15 sequences . Large distance encountered between tax45 and tax15 sequences . Large distance encountered between tax46 and tax15 sequences . Large distance encountered between tax36 and tax16 sequences . Large distance encountered between tax37 and tax16 sequences . Large distance encountered between tax38 and tax16 sequences . Large distance encountered between tax39 and tax16 sequences . Large distance encountered between tax40 and tax16 sequences . Large distance encountered between tax41 and tax16 sequences . Large distance encountered between tax42 and tax16 sequences . Large distance encountered between tax43 and tax16 sequences . Large distance encountered between tax44 and tax16 sequences . Large distance encountered between tax45 and tax16 sequences . Large distance encountered between tax46 and tax16 sequences . Large distance encountered between tax36 and tax17 sequences . Large distance encountered between tax37 and tax17 sequences . Large distance encountered between tax38 and tax17 sequences . Large distance encountered between tax39 and tax17 sequences . Large distance encountered between tax40 and tax17 sequences . Large distance encountered between tax41 and tax17 sequences . Large distance encountered between tax42 and tax17 sequences . Large distance encountered between tax43 and tax17 sequences . Large distance encountered between tax44 and tax17 sequences . Large distance encountered between tax45 and tax17 sequences . Large distance encountered between tax46 and tax17 sequences . Large distance encountered between tax36 and tax18 sequences . Large distance encountered between tax37 and tax18 sequences . Large distance encountered between tax38 and tax18 sequences . Large distance encountered between tax39 and tax18 sequences . Large distance encountered between tax40 and tax18 sequences . Large distance encountered between tax41 and tax18 sequences . Large distance encountered between tax42 and tax18 sequences . Large distance encountered between tax43 and tax18 sequences . Large distance encountered between tax44 and tax18 sequences . Large distance encountered between tax45 and tax18 sequences . Large distance encountered between tax46 and tax18 sequences . Large distance encountered between tax36 and tax19 sequences . Large distance encountered between tax37 and tax19 sequences . Large distance encountered between tax38 and tax19 sequences . Large distance encountered between tax39 and tax19 sequences . Large distance encountered between tax40 and tax19 sequences . Large distance encountered between tax41 and tax19 sequences . Large distance encountered between tax42 and tax19 sequences . Large distance encountered between tax43 and tax19 sequences . Large distance encountered between tax44 and tax19 sequences . Large distance encountered between tax45 and tax19 sequences . Large distance encountered between tax46 and tax19 sequences . Large distance encountered between tax36 and tax20 sequences . Large distance encountered between tax37 and tax20 sequences . Large distance encountered between tax38 and tax20 sequences . Large distance encountered between tax39 and tax20 sequences . Large distance encountered between tax40 and tax20 sequences . Large distance encountered between tax41 and tax20 sequences . Large distance encountered between tax42 and tax20 sequences . Large distance encountered between tax43 and tax20 sequences . Large distance encountered between tax44 and tax20 sequences . Large distance encountered between tax45 and tax20 sequences . Large distance encountered between tax46 and tax20 sequences . Large distance encountered between tax36 and tax21 sequences . Large distance encountered between tax37 and tax21 sequences . Large distance encountered between tax38 and tax21 sequences . Large distance encountered between tax39 and tax21 sequences . Large distance encountered between tax40 and tax21 sequences . Large distance encountered between tax41 and tax21 sequences . Large distance encountered between tax42 and tax21 sequences . Large distance encountered between tax43 and tax21 sequences . Large distance encountered between tax44 and tax21 sequences . Large distance encountered between tax45 and tax21 sequences . Large distance encountered between tax46 and tax21 sequences . Large distance encountered between tax36 and tax22 sequences . Large distance encountered between tax37 and tax22 sequences . Large distance encountered between tax38 and tax22 sequences . Large distance encountered between tax39 and tax22 sequences . Large distance encountered between tax40 and tax22 sequences . Large distance encountered between tax41 and tax22 sequences . Large distance encountered between tax42 and tax22 sequences . Large distance encountered between tax43 and tax22 sequences . Large distance encountered between tax44 and tax22 sequences . Large distance encountered between tax45 and tax22 sequences . Large distance encountered between tax46 and tax22 sequences . Large distance encountered between tax36 and tax23 sequences . Large distance encountered between tax37 and tax23 sequences . Large distance encountered between tax38 and tax23 sequences . Large distance encountered between tax39 and tax23 sequences . Large distance encountered between tax40 and tax23 sequences . Large distance encountered between tax41 and tax23 sequences . Large distance encountered between tax42 and tax23 sequences . Large distance encountered between tax43 and tax23 sequences . Large distance encountered between tax44 and tax23 sequences . Large distance encountered between tax45 and tax23 sequences . Large distance encountered between tax46 and tax23 sequences . Large distance encountered between tax36 and tax24 sequences . Large distance encountered between tax37 and tax24 sequences . Large distance encountered between tax38 and tax24 sequences . Large distance encountered between tax39 and tax24 sequences . Large distance encountered between tax40 and tax24 sequences . Large distance encountered between tax41 and tax24 sequences . Large distance encountered between tax42 and tax24 sequences . Large distance encountered between tax43 and tax24 sequences . Large distance encountered between tax44 and tax24 sequences . Large distance encountered between tax45 and tax24 sequences . Large distance encountered between tax46 and tax24 sequences . Large distance encountered between tax36 and tax25 sequences . Large distance encountered between tax37 and tax25 sequences . Large distance encountered between tax38 and tax25 sequences . Large distance encountered between tax39 and tax25 sequences . Large distance encountered between tax40 and tax25 sequences . Large distance encountered between tax41 and tax25 sequences . Large distance encountered between tax42 and tax25 sequences . Large distance encountered between tax43 and tax25 sequences . Large distance encountered between tax44 and tax25 sequences . Large distance encountered between tax45 and tax25 sequences . Large distance encountered between tax46 and tax25 sequences . Large distance encountered between tax36 and tax26 sequences . Large distance encountered between tax37 and tax26 sequences . Large distance encountered between tax38 and tax26 sequences . Large distance encountered between tax39 and tax26 sequences . Large distance encountered between tax40 and tax26 sequences . Large distance encountered between tax41 and tax26 sequences . Large distance encountered between tax42 and tax26 sequences . Large distance encountered between tax43 and tax26 sequences . Large distance encountered between tax44 and tax26 sequences . Large distance encountered between tax45 and tax26 sequences . Large distance encountered between tax46 and tax26 sequences . Large distance encountered between tax36 and tax27 sequences . Large distance encountered between tax37 and tax27 sequences . Large distance encountered between tax38 and tax27 sequences . Large distance encountered between tax39 and tax27 sequences . Large distance encountered between tax40 and tax27 sequences . Large distance encountered between tax41 and tax27 sequences . Large distance encountered between tax42 and tax27 sequences . Large distance encountered between tax43 and tax27 sequences . Large distance encountered between tax44 and tax27 sequences . Large distance encountered between tax45 and tax27 sequences . Large distance encountered between tax46 and tax27 sequences . Large distance encountered between tax36 and tax28 sequences . Large distance encountered between tax37 and tax28 sequences . Large distance encountered between tax38 and tax28 sequences . Large distance encountered between tax39 and tax28 sequences . Large distance encountered between tax40 and tax28 sequences . Large distance encountered between tax41 and tax28 sequences . Large distance encountered between tax42 and tax28 sequences . Large distance encountered between tax43 and tax28 sequences . Large distance encountered between tax44 and tax28 sequences . Large distance encountered between tax45 and tax28 sequences . Large distance encountered between tax46 and tax28 sequences . Large distance encountered between tax36 and tax29 sequences . Large distance encountered between tax37 and tax29 sequences . Large distance encountered between tax38 and tax29 sequences . Large distance encountered between tax39 and tax29 sequences . Large distance encountered between tax40 and tax29 sequences . Large distance encountered between tax41 and tax29 sequences . Large distance encountered between tax42 and tax29 sequences . Large distance encountered between tax43 and tax29 sequences . Large distance encountered between tax44 and tax29 sequences . Large distance encountered between tax45 and tax29 sequences . Large distance encountered between tax46 and tax29 sequences . Large distance encountered between tax36 and tax30 sequences . Large distance encountered between tax37 and tax30 sequences . Large distance encountered between tax38 and tax30 sequences . Large distance encountered between tax39 and tax30 sequences . Large distance encountered between tax40 and tax30 sequences . Large distance encountered between tax41 and tax30 sequences . Large distance encountered between tax42 and tax30 sequences . Large distance encountered between tax43 and tax30 sequences . Large distance encountered between tax44 and tax30 sequences . Large distance encountered between tax45 and tax30 sequences . Large distance encountered between tax46 and tax30 sequences . Large distance encountered between tax36 and tax31 sequences . Large distance encountered between tax37 and tax31 sequences . Large distance encountered between tax38 and tax31 sequences . Large distance encountered between tax39 and tax31 sequences . Large distance encountered between tax40 and tax31 sequences . Large distance encountered between tax41 and tax31 sequences . Large distance encountered between tax42 and tax31 sequences . Large distance encountered between tax43 and tax31 sequences . Large distance encountered between tax44 and tax31 sequences . Large distance encountered between tax45 and tax31 sequences . Large distance encountered between tax46 and tax31 sequences . Large distance encountered between tax36 and tax32 sequences . Large distance encountered between tax37 and tax32 sequences . Large distance encountered between tax38 and tax32 sequences . Large distance encountered between tax39 and tax32 sequences . Large distance encountered between tax40 and tax32 sequences . Large distance encountered between tax41 and tax32 sequences . Large distance encountered between tax42 and tax32 sequences . Large distance encountered between tax43 and tax32 sequences . Large distance encountered between tax44 and tax32 sequences . Large distance encountered between tax45 and tax32 sequences . Large distance encountered between tax46 and tax32 sequences . Large distance encountered between tax36 and tax33 sequences . Large distance encountered between tax37 and tax33 sequences . Large distance encountered between tax38 and tax33 sequences . Large distance encountered between tax39 and tax33 sequences . Large distance encountered between tax40 and tax33 sequences . Large distance encountered between tax41 and tax33 sequences . Large distance encountered between tax42 and tax33 sequences . Large distance encountered between tax43 and tax33 sequences . Large distance encountered between tax44 and tax33 sequences . Large distance encountered between tax45 and tax33 sequences . Large distance encountered between tax46 and tax33 sequences . Large distance encountered between tax36 and tax34 sequences . Large distance encountered between tax37 and tax34 sequences . Large distance encountered between tax38 and tax34 sequences . Large distance encountered between tax39 and tax34 sequences . Large distance encountered between tax40 and tax34 sequences . Large distance encountered between tax41 and tax34 sequences . Large distance encountered between tax42 and tax34 sequences . Large distance encountered between tax43 and tax34 sequences . Large distance encountered between tax44 and tax34 sequences . Large distance encountered between tax45 and tax34 sequences . Large distance encountered between tax46 and tax34 sequences . Large distance encountered between tax36 and tax35 sequences . Large distance encountered between tax37 and tax35 sequences . Large distance encountered between tax38 and tax35 sequences . Large distance encountered between tax39 and tax35 sequences . Large distance encountered between tax40 and tax35 sequences . Large distance encountered between tax41 and tax35 sequences . Large distance encountered between tax42 and tax35 sequences . Large distance encountered between tax43 and tax35 sequences . Large distance encountered between tax44 and tax35 sequences . Large distance encountered between tax45 and tax35 sequences . Large distance encountered between tax46 and tax35 sequences . Building BIONJ tree... . Nbytes = 8182304 . Log(lk) : * -> -3015.213418 . Log(lk) : -3015.213418 -> -2948.135488 7 swaps done . Log(lk) : -2948.135488 -> -2935.310465 5 swaps done . Log(lk) : -2935.310465 -> -2930.596390 3 swaps done . Optimisation of the gamma shape parameter... . Log(lk) : -2927.420730 -> -2927.845925 2 swaps done . Moving backward (topology + branch lengths) . Optimisation of the gamma shape parameter... . Log(lk) : -2927.420730 -> -2926.990320 2 swaps done . Log(lk) : -2926.990320 -> -2927.022603 1 swap done . Moving backward (topology + branch lengths) . Optimisation of the gamma shape parameter... . Log(lk) : -2926.990320 -> -2926.296038 1 swap done . Optimisation of the gamma shape parameter... . Log(lk) : -2926.296038 -> -2927.245112 1 swap done . Moving backward (topology + branch lengths) . Optimisation of the gamma shape parameter... . Log(lk) : -2926.296038 -> -2925.980989 1 swap done . Log(lk) : -2925.980989 -> -2925.552965 1 swap done . Log(lk) : -2925.552965 -> -2925.346066 0 swap done . Optimisation of the gamma shape parameter... . Log(lk) : -2925.345736 -> -2925.316804 0 swap done . Log(lk) : -2925.316804 -> -2925.308618 0 swap done . Log(lk) : -2925.308618 -> -2925.305465 0 swap done . Log(lk) : -2925.305465 -> -2925.304025 0 swap done . Optimisation of the gamma shape parameter... . Log(lk) : -2925.304024 -> -2925.303296 0 swap done . Last optimization step... . Log(lk) : * -> -2925.302706 . Optimisation of the gamma shape parameter... . Log(lk) : -2925.302706 -> -2925.302433 . Optimisation of the gamma shape parameter... . Log(lk) : -2925.302433 -> -2925.302352 . Optimisation of the gamma shape parameter... . Log(lk) : -2925.302352 -> -2925.302326 . Optimisation of the gamma shape parameter... . Log(lk) : -2925.302326 -> -2925.302318 . Optimisation of the gamma shape parameter... . Log(lk) : -2925.302318 -> -2925.302315 . Optimisation of the gamma shape parameter... . Log(lk) : -2925.302315 -> -2925.302314 . Optimisation of the gamma shape parameter... . Final Log(lk) : -2925.302314 . Time used 0h1m13s %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% 72.55user 0.00system 1:12.79elapsed 99%CPU (0avgtext+0avgdata 0maxresident)k 0inputs+0outputs (0major+0minor)pagefaults 0swaps