You are using RAxML version 7.0.4 released by Alexandros Stamatakis in April 2008 Alignment has 956 distinct alignment patterns Proportion of gaps and completely undetermined characters in this alignment: 0.371820 RAxML rapid hill-climbing mode Executing 1 inference on the original alignment using a distinct randomized MP tree All free model parameters will be estimated by RAxML GAMMA model of rate heteorgeneity, ML estimate of alpha-parameter GAMMA Model parameters will be estimated up to an accuracy of 0.1000000000 Log Likelihood units Partition: 0 Name: No Name Provided DataType: AA Substitution Matrix: WAG Fixed Base Frequencies: pi(A): 0.087000 pi(R): 0.044000 pi(N): 0.039000 pi(D): 0.057000 pi(C): 0.019000 pi(Q): 0.037000 pi(E): 0.058000 pi(G): 0.083000 pi(H): 0.024000 pi(I): 0.049000 pi(L): 0.086000 pi(K): 0.062000 pi(M): 0.020000 pi(F): 0.038000 pi(P): 0.046000 pi(S): 0.070000 pi(T): 0.061000 pi(W): 0.014000 pi(Y): 0.035000 pi(V): 0.071000 64.049017 -68291.129999 163.958306 -68214.210748 429.066389 -68192.868584 1018.265440 -68168.574905 1575.439729 -68158.370922 2132.387594 -68154.087242 2694.652229 -68153.767086 3252.782151 -68153.592834 3807.520888 -68153.592834 4389.530232 -68153.592833 4839.166717 -68153.592833 5238.344389 -68153.592833 5508.961595 -68153.592833 5609.953420 -68153.592332 Overall Time for 1 Inference 5609.979165 Likelihood : -68153.592332 Parsimony starting tree written to: /auto/dufayard/res/bigdatasets_raxml_prot/./RAxML_parsimonyTree.proteic_M3068_50x1000_2006.phy_RAXML Final tree written to: /auto/dufayard/res/bigdatasets_raxml_prot/./RAxML_result.proteic_M3068_50x1000_2006.phy_RAXML Execution Log File written to: /auto/dufayard/res/bigdatasets_raxml_prot/./RAxML_log.proteic_M3068_50x1000_2006.phy_RAXML Execution information file written to: /auto/dufayard/res/bigdatasets_raxml_prot/./RAxML_info.proteic_M3068_50x1000_2006.phy_RAXML 5608.47user 0.00system 1:33:30elapsed 99%CPU (0avgtext+0avgdata 0maxresident)k 0inputs+0outputs (0major+0minor)pagefaults 0swaps