Sequence filename : 		 /auto/dufayard/res/parc_wim/proteic_M1381_9x1557_2003.phy
Data type :             	 aa
Sequence format : 		 interleaved
Number of data sets : 		 1
Nb of bootstrapped data sets : 	 0
Model name : 			 WAG
Proportion of invariable sites : 0.000000
Number of subst. rate categs : 	 4
Gamma distribution parameter : 	 estimated
Starting tree : 		 BIONJ
Optimise tree topology : 	 yes
Optimise branch lengths and rate parameters : yes

. Compressing sequences...

. Computing pairwise distances...

. Building BIONJ tree...

N_RGRFT: 3  N_GLOBL: 1  MAX_DIST: 1


. Log(lk) :               * ->   -12222.814024 
. Log(lk) :   -12222.814024 ->   -12186.219263   0 swap  done
. Log(lk) :   -12186.219263 ->   -12184.271590   0 swap  done
. Log(lk) :   -12184.271590 ->   -12184.070696   0 swap  done

. Optimisation of the gamma shape parameter...

. Log(lk) :   -12100.911605 ->   -12099.522091   0 swap  done
. Log(lk) :   -12099.522091 ->   -12099.303490   0 swap  done
. Log(lk) :   -12099.303490 ->   -12099.241080   0 swap  done
Trying SPR moves
  -calculating tree distances and estimating likelihoods
  -performing local edge length optimizations
  -performing global edge length optimization
Log (lk): -12099.219148


. Last optimization step...

. Log(lk) :               * ->   -12099.215081 

. Optimisation of the gamma shape parameter...

. Log(lk) :   -12099.215081 ->   -12099.214965 

. Optimisation of the gamma shape parameter...

. Log(lk) :   -12099.214965 ->   -12099.214965 

. Optimisation of the gamma shape parameter...
nr_d_L:  48
nr_d_lk: 42
nr_loc:  42
nr_glb:  1


. Time used 0h0m23s

%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

22.28user 0.00system 0:22.56elapsed 98%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+0minor)pagefaults 0swaps