Sequence filename : 		 /auto/dufayard/res/parc_wim/proteic_M1504_37x547_2003.phy
Data type :             	 aa
Sequence format : 		 interleaved
Number of data sets : 		 1
Nb of bootstrapped data sets : 	 0
Model name : 			 WAG
Proportion of invariable sites : 0.000000
Number of subst. rate categs : 	 4
Gamma distribution parameter : 	 estimated
Starting tree : 		 BIONJ
Optimise tree topology : 	 yes
Optimise branch lengths and rate parameters : yes

. Compressing sequences...

. Computing pairwise distances...

. Building BIONJ tree...

N_RGRFT: 14  N_GLOBL: 7  MAX_DIST: 7


. Log(lk) :               * ->   -12770.136380 
. Log(lk) :   -12770.136380 ->   -12677.831783   3 swaps done 
. Log(lk) :   -12677.831783 ->   -12668.974705   0 swap  done
. Log(lk) :   -12668.974705 ->   -12667.849831   0 swap  done

. Optimisation of the gamma shape parameter...

. Log(lk) :   -12586.378475 ->   -12585.761819   0 swap  done
. Log(lk) :   -12585.761819 ->   -12585.693538   0 swap  done
. Log(lk) :   -12585.693538 ->   -12585.679463   0 swap  done
. Log(lk) :   -12585.679463 ->   -12585.674925   0 swap  done
Trying SPR moves
  -calculating tree distances and estimating likelihoods
  -performing local edge length optimizations
  -performing global edge length optimization
Log (lk): -12585.684433


. Last optimization step...

. Log(lk) :               * ->   -12585.677276 

. Optimisation of the gamma shape parameter...

. Log(lk) :   -12585.677276 ->   -12585.676724 

. Optimisation of the gamma shape parameter...

. Log(lk) :   -12585.676724 ->   -12585.676711 

. Optimisation of the gamma shape parameter...

. Log(lk) :   -12585.676711 ->   -12585.676711 

. Optimisation of the gamma shape parameter...
nr_d_L:  3328
nr_d_lk: 1152
nr_loc:  100
nr_glb:  7


. Time used 0h2m28s

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131.09user 0.00system 2:27.89elapsed 88%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+0minor)pagefaults 0swaps