Sequence filename : 		 /auto/dufayard/res/parc_wim/proteic_M2637_19x380_2006.phy
Data type :             	 aa
Sequence format : 		 interleaved
Number of data sets : 		 1
Nb of bootstrapped data sets : 	 0
Model name : 			 WAG
Proportion of invariable sites : 0.000000
Number of subst. rate categs : 	 4
Gamma distribution parameter : 	 estimated
Starting tree : 		 BIONJ
Optimise tree topology : 	 yes
Optimise branch lengths and rate parameters : yes

. Compressing sequences...

. Computing pairwise distances...

. Building BIONJ tree...

N_RGRFT: 7  N_GLOBL: 3  MAX_DIST: 3


. Log(lk) :               * ->    -1624.123747 
. Log(lk) :    -1624.123747 ->    -1621.331230   2 swaps done 
. Log(lk) :    -1621.331230 ->    -1620.311262   2 swaps done 
. Log(lk) :    -1620.311262 ->    -1618.875436   2 swaps done 

. Optimisation of the gamma shape parameter...

. Log(lk) :    -1606.013348 ->    -1605.352640   1 swap  done
. Log(lk) :    -1605.352640 ->    -1605.213500   1 swap  done
. Log(lk) :    -1605.213500 ->    -1605.184977   1 swap  done
. Log(lk) :    -1605.184977 ->    -1605.178582   1 swap  done

. Optimisation of the gamma shape parameter...

. Log(lk) :    -1605.178554 ->    -1605.176872   1 swap  done
. Log(lk) :    -1605.176872 ->    -1605.176464   1 swap  done
Trying SPR moves
  -calculating tree distances and estimating likelihoods
  -performing local edge length optimizations
  -performing global edge length optimization
Log (lk): -1605.176469
nr_d_L:  496
nr_d_lk: 277
nr_loc:  100
nr_glb:  3


. Time used 0h0m14s

%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

13.32user 0.00system 0:13.80elapsed 96%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+0minor)pagefaults 0swaps