Sequence filename : 		 /auto/dufayard/res/parc_wim/proteic_M2640_18x243_2006.phy
Data type :             	 aa
Sequence format : 		 interleaved
Number of data sets : 		 1
Nb of bootstrapped data sets : 	 0
Model name : 			 WAG
Proportion of invariable sites : 0.000000
Number of subst. rate categs : 	 4
Gamma distribution parameter : 	 estimated
Starting tree : 		 BIONJ
Optimise tree topology : 	 yes
Optimise branch lengths and rate parameters : yes

. Compressing sequences...

. Computing pairwise distances...

. Building BIONJ tree...

N_RGRFT: 6  N_GLOBL: 3  MAX_DIST: 3


. Log(lk) :               * ->    -2519.056637 
. Log(lk) :    -2519.056637 ->    -2514.202609   0 swap  done
. Log(lk) :    -2514.202609 ->    -2513.769375   0 swap  done
. Log(lk) :    -2513.769375 ->    -2513.713373   0 swap  done

. Optimisation of the gamma shape parameter...

. Log(lk) :    -2510.928375 ->    -2510.888834   0 swap  done
. Log(lk) :    -2510.888834 ->    -2510.883211   0 swap  done
. Log(lk) :    -2510.883211 ->    -2510.881903   0 swap  done
Trying SPR moves
  -calculating tree distances and estimating likelihoods
  -performing local edge length optimizations
  -performing global edge length optimization
Log (lk): -2510.881903


. Last optimization step...

. Log(lk) :               * ->    -2510.881903 

. Optimisation of the gamma shape parameter...

. Log(lk) :    -2510.881903 ->    -2510.880637 

. Optimisation of the gamma shape parameter...

. Log(lk) :    -2510.880637 ->    -2510.880637 

. Optimisation of the gamma shape parameter...
nr_d_L:  464
nr_d_lk: 228
nr_loc:  100
nr_glb:  3


. Time used 0h0m21s

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20.42user 0.00system 0:21.21elapsed 96%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+0minor)pagefaults 0swaps