.......................... ooooooooooooooooooooooooooooo CURRENT SETTINGS ooooooooooooooooooooooooooooooooooo .......................... . Sequence filename : nucleic_M2572_191x990_2006.phy . Data type : dna . Sequence format : interleaved . Number of data sets : 1 . Nb of bootstrapped data sets : 0 . Model name : GTR . Proportion of invariable sites : 0.000000 . Number of subst. rate categs : 4 . Gamma distribution parameter : estimated . 'Middle' of each rate class : mean . Nucleotide equilibrium frequencies : empirical . Optimise tree topology : yes . Tree topology search : Best of NNIs and SPRs . Starting tree : BioNJ . Add random input tree : yes . Number of random starting trees : 5 . Optimise branch lengths : yes . Optimise substitution model parameters : yes . Run ID : none oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo . Compressing sequences... . 285 patterns found. (out of a total of 990 sites) . 729 sites without polymorphism (73.64%). . [Random start 1/ 5] . Computing pairwise distances... . Building BioNJ tree... . Randomising the tree... . This analysis requires at least 29Mo of memory space. . Maximizing likelihood (using SPR moves)... . ( 3 sec) [ -53478.4530] [GTR parameters ] . ( 4 sec) [ -52834.1917] [Alpha ][ 0.500960] . ( 4 sec) [ -52255.8109] [ 3320] [depth= 12] . ( 4 sec) [ -51898.6259] [ 3304] [depth= 5] . ( 4 sec) [ -51433.7738] [ 3301] [depth= 2] . ( 4 sec) [ -51389.7421] [ 3288] [depth= 1] . ( 4 sec) [ -51082.6413] [ 3285] [depth= 10] . ( 5 sec) [ -50567.0468] [ 3273] [depth= 1] . ( 5 sec) [ -50382.2592] [ 3272] [depth= 11] . ( 5 sec) [ -50261.2359] [ 3268] [depth= 2] . ( 5 sec) [ -50048.7647] [ 3264] [depth= 10] . ( 5 sec) [ -49763.9588] [ 3264] [depth= 3] . ( 5 sec) [ -49206.1082] [ 3263] [depth= 10] . ( 5 sec) [ -48988.7872] [ 3253] [depth= 6] . ( 5 sec) [ -48011.0320] [ 3253] [depth= 2] . ( 5 sec) [ -47870.0657] [ 3269] [depth= 1] . ( 6 sec) [ -47750.3103] [ 3250] [depth= 16] . ( 6 sec) [ -47736.4632] [ 3245] [depth= 2] . ( 6 sec) [ -47317.6018] [ 3245] [depth= 1] . ( 6 sec) [ -47133.3689] [ 3241] [depth= 2] . ( 6 sec) [ -46856.5541] [ 3240] [depth= 9] . ( 6 sec) [ -46511.4946] [ 3238] [depth= 7] . ( 6 sec) [ -46292.9824] [ 3238] [depth= 3] . ( 6 sec) [ -45959.5011] [ 3238] [depth= 3] . ( 6 sec) [ -45781.3261] [ 3238] [depth= 4] . ( 7 sec) [ -45765.9415] [ 3238] [depth= 2] . ( 7 sec) [ -45679.5706] [ 3238] [depth= 2] . ( 7 sec) [ -45513.9989] [ 3238] [depth= 1] . ( 7 sec) [ -45476.5912] [ 3238] [depth= 2] . ( 7 sec) [ -45330.9351] [ 3217] [depth= 25] . ( 7 sec) [ -45148.9146] [ 3217] [depth= 1] . ( 7 sec) [ -44885.8115] [ 3214] [depth= 10] . ( 8 sec) [ -44794.6454] [ 3201] [depth= 8] . ( 8 sec) [ -44710.2903] [ 3180] [depth= 3] . ( 8 sec) [ -44379.8609] [ 3179] [depth= 6] . ( 8 sec) [ -44378.3000] [ 3173] [depth= 3] . ( 8 sec) [ -44249.8371] [ 3173] [depth= 5] . ( 8 sec) [ -44188.8967] [ 3163] [depth= 32] . ( 8 sec) [ -43930.3123] [ 3163] [depth= 8] . ( 8 sec) [ -43927.3997] [ 3163] [depth= 1] . ( 9 sec) [ -43847.1353] [ 3148] [depth= 43] . ( 9 sec) [ -43723.5330] [ 3139] [depth= 10] . ( 9 sec) [ -43487.4702] [ 3139] [depth= 4] . ( 9 sec) [ -43473.2797] [ 3137] [depth= 9] . ( 9 sec) [ -43394.2884] [ 3137] [depth= 3] . ( 9 sec) [ -43198.9353] [ 3108] [depth= 15] . ( 9 sec) [ -43012.2008] [ 3092] [depth= 13] . ( 9 sec) [ -42928.4815] [ 3090] [depth= 11] . ( 10 sec) [ -42184.3198] [ 3077] [depth= 10] . ( 10 sec) [ -41945.7065] [ 3077] [depth= 1] . ( 10 sec) [ -41715.3426] [ 3056] [depth= 2] . ( 10 sec) [ -41340.3233] [ 3046] [depth= 11] . ( 10 sec) [ -41053.1953] [ 3029] [depth= 20] . ( 10 sec) [ -40469.6317] [ 3032] [depth= 28] . ( 10 sec) [ -40154.7381] [ 2994] [depth= 27] . ( 11 sec) [ -40118.1980] [ 2993] [depth= 4] . ( 11 sec) [ -40099.0280] [ 2979] [depth= 10] . ( 11 sec) [ -39981.8357] [ 2958] [depth= 12] . ( 11 sec) [ -39421.2889] [ 2940] [depth= 2] . ( 11 sec) [ -39269.7252] [ 2923] [depth= 6] . ( 11 sec) [ -38909.0881] [ 2872] [depth= 10] . ( 11 sec) [ -38658.0141] [ 2872] [depth= 12] . ( 12 sec) [ -38408.4425] [ 2869] [depth= 12] . ( 12 sec) [ -38095.0582] [ 2869] [depth= 4] . ( 12 sec) [ -37959.7926] [ 2855] [depth= 7] . ( 12 sec) [ -37872.1834] [ 2854] [depth= 1] . ( 12 sec) [ -37740.1516] [ 2840] [depth= 6] . ( 12 sec) [ -37587.5225] [ 2840] [depth= 11] . ( 12 sec) [ -37129.0901] [ 2840] [depth= 19] . ( 12 sec) [ -37007.7760] [ 2839] [depth= 2] . ( 13 sec) [ -36939.8882] [ 2839] [depth= 2] . ( 13 sec) [ -36911.5189] [ 2839] [depth= 1] . ( 13 sec) [ -36756.0966] [ 2839] [depth= 25] . ( 13 sec) [ -36177.9940] [ 2837] [depth= 14] . ( 13 sec) [ -35995.2839] [ 2837] [depth= 7] . ( 13 sec) [ -35538.4052] [ 2809] [depth= 16] . ( 13 sec) [ -35271.7676] [ 2805] [depth= 4] . ( 13 sec) [ -35260.8007] [ 2805] [depth= 3] . ( 13 sec) [ -35178.2028] [ 2801] [depth= 2] . ( 14 sec) [ -34706.0168] [ 2798] [depth= 17] . ( 14 sec) [ -34697.9829] [ 2797] [depth= 3] . ( 14 sec) [ -33932.2112] [ 2774] [depth= 15] . ( 14 sec) [ -33927.2191] [ 2774] [depth= 26] . ( 14 sec) [ -33733.4185] [ 2774] [depth= 23] . ( 14 sec) [ -33733.1169] [ 2765] [depth= 2] . ( 14 sec) [ -33678.9980] [ 2765] [depth= 1] . ( 15 sec) [ -33252.2592] [ 2751] [depth= 8] . ( 15 sec) [ -33247.4020] [ 2750] [depth= 8] . ( 15 sec) [ -32965.7389] [ 2749] [depth= 5] . ( 15 sec) [ -32757.6654] [ 2749] [depth= 1] . ( 15 sec) [ -32660.3089] [ 2748] [depth= 1] . ( 15 sec) [ -32303.0193] [ 2748] [depth= 1] . ( 15 sec) [ -32241.7297] [ 2729] [depth= 2] . ( 16 sec) [ -32127.4267] [ 2721] [depth= 10] . ( 16 sec) [ -32045.7304] [ 2708] [depth= 10] . ( 16 sec) [ -31865.9832] [ 2701] [depth= 19] . ( 16 sec) [ -31857.0108] [ 2701] [depth= 4] . ( 16 sec) [ -31842.1756] [ 2702] [depth= 4] . ( 16 sec) [ -31835.4043] [ 2701] [depth= 11] . ( 16 sec) [ -31734.6956] [ 2683] [depth= 9] . ( 16 sec) [ -31731.2745] [ 2683] [depth= 2] . ( 17 sec) [ -31722.1218] [ 2683] [depth= 1] . ( 17 sec) [ -31717.4631] [ 2683] [depth= 2] . ( 17 sec) [ -31464.0661] [ 2683] [depth= 1] . ( 17 sec) [ -31325.9156] [ 2641] [depth= 22] . ( 17 sec) [ -31254.3647] [ 2641] [depth= 26] . ( 17 sec) [ -30706.0601] [ 2598] [depth= 18] . ( 17 sec) [ -30482.8170] [ 2598] [depth= 14] . ( 17 sec) [ -30480.8927] [ 2598] [depth= 17] . ( 18 sec) [ -30389.1262] [ 2581] [depth= 3] . ( 18 sec) [ -30363.7837] [ 2581] [depth= 6] . ( 18 sec) [ -30353.0042] [ 2571] [depth= 7] . ( 18 sec) [ -30258.0202] [ 2569] [depth= 8] . ( 18 sec) [ -30236.6786] [ 2568] [depth= 19] . ( 18 sec) [ -30236.2757] [ 2568] [depth= 1] . ( 18 sec) [ -30090.8921] [ 2564] [depth= 13] . ( 19 sec) [ -29558.1536] [ 2565] [depth= 19] . ( 19 sec) [ -29539.2007] [ 2564] [depth= 18] . ( 19 sec) [ -29494.3162] [ 2560] [depth= 7] . ( 19 sec) [ -29049.5598] [ 2559] [depth= 5] . ( 19 sec) [ -29031.8010] [ 2556] [depth= 10] . ( 19 sec) [ -29019.5284] [ 2553] [depth= 11] . ( 19 sec) [ -28843.1323] [ 2524] [depth= 2] . ( 19 sec) [ -28841.2189] [ 2524] [depth= 18] . ( 20 sec) [ -28224.0553] [ 2494] [depth= 8] . ( 20 sec) [ -28213.7251] [ 2493] [depth= 13] . ( 20 sec) [ -28192.0034] [ 2493] [depth= 1] . ( 20 sec) [ -28101.4443] [ 2480] [depth= 10] . ( 20 sec) [ -28093.9752] [ 2480] [depth= 2] . ( 20 sec) [ -27703.5781] [ 2480] [depth= 11] . ( 20 sec) [ -27699.3757] [ 2478] [depth= 1] . ( 21 sec) [ -27583.9868] [ 2465] [depth= 9] . ( 21 sec) [ -27285.2327] [ 2434] [depth= 3] . ( 21 sec) [ -26858.9227] [ 2433] [depth= 1] . ( 21 sec) [ -26857.5006] [ 2433] [depth= 1] . ( 21 sec) [ -26830.6090] [ 2428] [depth= 11] . ( 21 sec) [ -26827.8103] [ 2428] [depth= 1] . ( 21 sec) [ -26755.2652] [ 2428] [depth= 1] . ( 22 sec) [ -26711.8266] [ 2426] [depth= 17] . ( 22 sec) [ -26678.7973] [ 2424] [depth= 16] . ( 22 sec) [ -26165.2360] [ 2411] [depth= 12] . ( 22 sec) [ -26075.5272] [ 2410] [depth= 5] . ( 22 sec) [ -25406.3462] [ 2409] [depth= 17] . ( 22 sec) [ -25305.2783] [ 2382] [depth= 3] . ( 22 sec) [ -25036.8094] [ 2382] [depth= 3] . ( 23 sec) [ -24829.0313] [ 2364] [depth= 11] . ( 23 sec) [ -24730.7841] [ 2359] [depth= 13] . ( 23 sec) [ -24696.4471] [ 2359] [depth= 10] . ( 23 sec) [ -24110.8937] [ 2359] [depth= 1] . ( 23 sec) [ -23968.0217] [ 2351] [depth= 7] . ( 23 sec) [ -23668.7128] [ 2334] [depth= 14] . ( 23 sec) [ -23489.5537] [ 2317] [depth= 6] . ( 23 sec) [ -23348.4515] [ 2304] [depth= 4] . ( 24 sec) [ -23127.0390] [ 2292] [depth= 3] . ( 24 sec) [ -22893.2374] [ 2281] [depth= 12] . ( 24 sec) [ -22778.7271] [ 2273] [depth= 17] . ( 24 sec) [ -22484.7735] [ 2273] [depth= 1] . ( 24 sec) [ -22386.4324] [ 2273] [depth= 1] . ( 24 sec) [ -22233.5322] [ 2273] [depth= 1] . ( 24 sec) [ -22137.0306] [ 2262] [depth= 3] . ( 24 sec) [ -22089.6530] [ 2246] [depth= 2] . ( 25 sec) [ -22031.0028] [ 2233] [depth= 3] . ( 25 sec) [ -21912.1572] [ 2231] [depth= 1] . ( 25 sec) [ -21779.9247] [ 2225] [depth= 16] . ( 25 sec) [ -21748.7862] [ 2221] [depth= 7] . ( 25 sec) [ -21714.4698] [ 2221] [depth= 18] . ( 25 sec) [ -21644.2630] [ 2202] [depth= 14] . ( 25 sec) [ -21625.5518] [ 2203] [depth= 1] . ( 25 sec) [ -21623.7846] [ 2203] [depth= 1] . ( 25 sec) [ -21538.8500] [ 2194] [depth= 9] . ( 26 sec) [ -21442.3639] [ 2176] [depth= 1] . ( 26 sec) [ -21348.8512] [ 2156] [depth= 17] . ( 26 sec) [ -21135.1678] [ 2156] [depth= 9] . ( 26 sec) [ -21132.9627] [ 2156] [depth= 2] . ( 26 sec) [ -21070.9120] [ 2142] [depth= 7] . ( 26 sec) [ -21066.3967] [ 2142] [depth= 1] . ( 26 sec) [ -20995.7911] [ 2124] [depth= 9] . ( 26 sec) [ -20995.7794] [ 2124] [depth= 14] . ( 27 sec) [ -20779.4865] [ 2090] [depth= 4] . ( 27 sec) [ -20761.1222] [ 2090] [depth= 4] . ( 27 sec) [ -20691.0459] [ 2080] [depth= 11] . ( 27 sec) [ -20674.4471] [ 2080] [depth= 4] . ( 27 sec) [ -20534.1090] [ 2050] [depth= 6] . ( 27 sec) [ -20456.7465] [ 2045] [depth= 10] . ( 27 sec) [ -20407.3206] [ 2051] [depth= 1] . ( 27 sec) [ -20363.1445] [ 2050] [depth= 12] . ( 28 sec) [ -20341.8908] [ 2044] [depth= 1] . ( 28 sec) [ -20135.8893] [ 2044] [depth= 15] . ( 28 sec) [ -20024.3107] [ 2044] [depth= 1] . ( 28 sec) [ -19914.3535] [ 2044] [depth= 6] . ( 28 sec) [ -19904.6499] [ 2043] [depth= 6] . ( 28 sec) [ -19784.8742] [ 2009] [depth= 4] . ( 28 sec) [ -19740.5374] [ 2008] [depth= 1] . ( 28 sec) [ -19446.8007] [ 2005] [depth= 7] . ( 29 sec) [ -19360.7567] [ 1995] [depth= 22] . ( 29 sec) [ -19347.3681] [ 1995] [depth= 19] . ( 29 sec) [ -19346.9129] [ 1995] [depth= 19] . ( 29 sec) [ -19160.3856] [ 1952] [depth= 9] . ( 29 sec) [ -19156.6046] [ 1952] [depth= 1] . ( 29 sec) [ -19122.1365] [ 1937] [depth= 5] . ( 29 sec) [ -19048.7633] [ 1924] [depth= 14] . ( 29 sec) [ -19047.3390] [ 1924] [depth= 21] . ( 30 sec) [ -19044.4119] [ 1924] [depth= 24] . ( 30 sec) [ -19036.4407] [ 1924] [depth= 5] . ( 30 sec) [ -18980.6672] [ 1924] [depth= 13] . ( 30 sec) [ -18968.4129] [ 1922] [depth= 4] . ( 30 sec) [ -18756.9765] [ 1922] [depth= 2] . ( 30 sec) [ -18635.6672] [ 1907] [depth= 14] . ( 30 sec) [ -18362.4985] [ 1907] [depth= 1] . ( 30 sec) [ -18304.0886] [ 1906] [depth= 12] . ( 30 sec) [ -17813.0741] [ 1906] [depth= 1] . ( 31 sec) [ -17664.0731] [ 1861] [depth= 18] . ( 31 sec) [ -17655.0514] [ 1861] [depth= 21] . ( 31 sec) [ -17612.4813] [ 1858] [depth= 22] . ( 31 sec) [ -17468.8956] [ 1858] [depth= 28] . ( 31 sec) [ -17087.6671] [ 1844] [depth= 9] . ( 31 sec) [ -17055.6955] [ 1828] [depth= 39] . ( 31 sec) [ -17030.9190] [ 1827] [depth= 33] . ( 32 sec) [ -17021.2997] [ 1827] [depth= 2] . ( 32 sec) [ -17020.2769] [ 1827] [depth= 18] . ( 32 sec) [ -17015.0053] [ 1827] [depth= 3] . ( 32 sec) [ -17002.1249] [ 1825] [depth= 20] . ( 32 sec) [ -16889.4096] [ 1825] [depth= 39] . ( 32 sec) [ -16819.3855] [ 1811] [depth= 8] . ( 32 sec) [ -16809.4948] [ 1808] [depth= 1] . ( 32 sec) [ -16703.0997] [ 1776] [depth= 7] . ( 33 sec) [ -16677.3610] [ 1772] [depth= 1] . ( 33 sec) [ -16672.5686] [ 1772] [depth= 8] . ( 33 sec) [ -16672.5540] [ 1772] [depth= 8] . ( 33 sec) [ -16672.5111] [ 1772] [depth= 7] . ( 33 sec) [ -16639.0427] [ 1763] [depth= 35] . ( 33 sec) [ -16562.9261] [ 1762] [depth= 3] . ( 33 sec) [ -16226.8978] [ 1741] [depth= 4] . ( 33 sec) [ -16177.2502] [ 1741] [depth= 1] . ( 34 sec) [ -16051.3502] [ 1731] [depth= 1] . ( 34 sec) [ -16044.1586] [ 1730] [depth= 1] . ( 34 sec) [ -16013.3239] [ 1723] [depth= 29] . ( 34 sec) [ -15985.2721] [ 1723] [depth= 1] . ( 34 sec) [ -15975.4825] [ 1722] [depth= 7] . ( 34 sec) [ -15739.4157] [ 1725] [depth= 30] . ( 34 sec) [ -15734.7875] [ 1725] [depth= 25] . ( 34 sec) [ -15733.4260] [ 1725] [depth= 5] . ( 35 sec) [ -15715.2331] [ 1722] [depth= 5] . ( 35 sec) [ -15710.4229] [ 1721] [depth= 35] . ( 35 sec) [ -15708.9333] [ 1721] [depth= 4] . ( 35 sec) [ -15701.1028] [ 1721] [depth= 23] . ( 35 sec) [ -15529.4222] [ 1680] [depth= 10] . ( 35 sec) [ -15505.5632] [ 1680] [depth= 4] . ( 35 sec) [ -15481.0861] [ 1691] [depth= 1] . ( 36 sec) [ -15363.8586] [ 1658] [depth= 20] . ( 36 sec) [ -15362.3042] [ 1656] [depth= 3] . ( 36 sec) [ -15353.8780] [ 1656] [depth= 1] . ( 36 sec) [ -15309.0196] [ 1656] [depth= 1] . ( 36 sec) [ -15301.7721] [ 1656] [depth= 11] . ( 36 sec) [ -15126.9869] [ 1656] [depth= 29] . ( 36 sec) [ -15126.8530] [ 1656] [depth= 14] . ( 36 sec) [ -15117.8627] [ 1656] [depth= 2] . ( 36 sec) [ -15078.4900] [ 1656] [depth= 9] . ( 37 sec) [ -15073.9028] [ 1656] [depth= 14] . ( 37 sec) [ -15071.2394] [ 1656] [depth= 24] . ( 37 sec) [ -15071.1541] [ 1656] [depth= 13] . ( 37 sec) [ -15070.6515] [ 1656] [depth= 1] . ( 37 sec) [ -15043.7968] [ 1654] [depth= 5] . ( 37 sec) [ -14793.9551] [ 1650] [depth= 42] . ( 37 sec) [ -14792.1564] [ 1649] [depth= 1] . ( 37 sec) [ -14715.4649] [ 1625] [depth= 1] . ( 38 sec) [ -14686.9557] [ 1619] [depth= 32] . ( 38 sec) [ -14683.9176] [ 1619] [depth= 31] . ( 38 sec) [ -14683.7220] [ 1619] [depth= 2] . ( 38 sec) [ -14675.7539] [ 1621] [depth= 1] . ( 38 sec) [ -14675.7297] [ 1621] [depth= 34] . ( 38 sec) [ -14671.5151] [ 1620] [depth= 9] . ( 38 sec) [ -14635.0077] [ 1615] [depth= 4] . ( 39 sec) [ -14613.9890] [ 1615] [depth= 25] . ( 39 sec) [ -14605.9099] [ 1616] [depth= 31] . ( 39 sec) [ -14475.8054] [ 1580] [depth= 3] . ( 39 sec) [ -14465.6372] [ 1581] [depth= 4] . ( 39 sec) [ -14463.8277] [ 1581] [depth= 4] . ( 39 sec) [ -14450.3529] [ 1578] [depth= 3] . ( 39 sec) [ -14448.0167] [ 1578] [depth= 13] . ( 39 sec) [ -14447.9958] [ 1578] [depth= 2] . ( 40 sec) [ -14439.3359] [ 1577] [depth= 33] . ( 40 sec) [ -14414.4902] [ 1575] [depth= 3] . ( 40 sec) [ -14217.7327] [ 1575] [depth= 9] . ( 40 sec) [ -14143.7593] [ 1557] [depth= 10] . ( 40 sec) [ -14142.6738] [ 1557] [depth= 2] . ( 40 sec) [ -14139.6267] [ 1559] [depth= 3] . ( 40 sec) [ -14066.4828] [ 1533] [depth= 31] . ( 40 sec) [ -14066.4562] [ 1533] [depth= 2] . ( 40 sec) [ -14065.8742] [ 1533] [depth= 4] . ( 41 sec) [ -14065.6645] [ 1533] [depth= 4] . ( 41 sec) [ -14065.4831] [ 1533] [depth= 6] . ( 41 sec) [ -14065.4712] [ 1533] [depth= 4] . ( 41 sec) [ -14064.5838] [ 1533] [depth= 1] . ( 41 sec) [ -14048.7074] [ 1533] [depth= 33] . ( 41 sec) [ -14048.1418] [ 1533] [depth= 29] . ( 41 sec) [ -14046.2255] [ 1533] [depth= 2] . ( 41 sec) [ -14038.1200] [ 1533] [depth= 2] . ( 42 sec) [ -14037.9538] [ 1533] [depth= 3] . ( 42 sec) [ -14036.9702] [ 1533] [depth= 28] . ( 42 sec) [ -13871.6453] [ 1533] [depth= 3] . ( 42 sec) [ -13529.1964] [ 1533] [depth= 2] . ( 42 sec) [ -13274.3469] [ 1518] [depth= 32] . ( 42 sec) [ -12858.5115] [ 1514] [depth= 19] . ( 42 sec) [ -12801.0901] [ 1514] [depth= 1] . ( 42 sec) [ -12730.9288] [ 1511] [depth= 3] . ( 43 sec) [ -12727.8391] [ 1511] [depth= 20] . ( 43 sec) [ -12630.0048] [ 1512] [depth= 9] . ( 43 sec) [ -12512.1343] [ 1500] [depth= 20] . ( 43 sec) [ -12505.7130] [ 1500] [depth= 28] . ( 43 sec) [ -12012.8439] [ 1493] [depth= 3] . ( 43 sec) [ -11944.0648] [ 1491] [depth= 2] . ( 43 sec) [ -11897.6983] [ 1491] [depth= 7] . ( 44 sec) [ -11704.3865] [ 1477] [depth= 8] . ( 44 sec) [ -11696.9713] [ 1476] [depth= 14] . ( 44 sec) [ -11351.4399] [ 1446] [depth= 23] . ( 44 sec) [ -11337.2997] [ 1443] [depth= 8] . ( 44 sec) [ -11336.2822] [ 1444] [depth= 4] . ( 44 sec) [ -11324.0362] [ 1444] [depth= 24] . ( 44 sec) [ -11271.8577] [ 1432] [depth= 24] . ( 44 sec) [ -11261.8636] [ 1432] [depth= 3] . ( 45 sec) [ -10783.8799] [ 1431] [depth= 7] . ( 45 sec) [ -10783.5645] [ 1431] [depth= 1] . ( 45 sec) [ -10782.4775] [ 1431] [depth= 6] . ( 45 sec) [ -10776.7409] [ 1431] [depth= 15] . ( 45 sec) [ -10721.7403] [ 1426] [depth= 4] . ( 45 sec) [ -10714.7819] [ 1425] [depth= 29] . ( 45 sec) [ -10684.4243] [ 1415] [depth= 1] . ( 45 sec) [ -10680.3886] [ 1415] [depth= 6] . ( 46 sec) [ -10520.2820] [ 1401] [depth= 8] . ( 46 sec) [ -10433.3594] [ 1405] [depth= 1] . ( 46 sec) [ -10395.3128] [ 1401] [depth= 26] . ( 46 sec) [ -10378.8446] [ 1399] [depth= 24] . ( 46 sec) [ -10378.7777] [ 1399] [depth= 14] . ( 46 sec) [ -10363.2958] [ 1399] [depth= 16] . ( 46 sec) [ -10319.4622] [ 1399] [depth= 1] . ( 46 sec) [ -10313.6299] [ 1399] [depth= 6] . ( 47 sec) [ -10306.3644] [ 1399] [depth= 11] . ( 47 sec) [ -10217.9067] [ 1376] [depth= 24] . ( 47 sec) [ -10217.3097] [ 1376] [depth= 2] . ( 47 sec) [ -10217.0978] [ 1376] [depth= 20] . ( 47 sec) [ -10202.6931] [ 1376] [depth= 2] . ( 47 sec) [ -10006.2381] [ 1361] [depth= 12] . ( 47 sec) [ -10006.0849] [ 1361] [depth= 1] . ( 47 sec) [ -10005.9924] [ 1361] [depth= 9] . ( 48 sec) [ -9979.0339] [ 1357] [depth= 3] . ( 48 sec) [ -9975.0551] [ 1356] [depth= 3] . ( 48 sec) [ -9862.9951] [ 1326] [depth= 12] . ( 48 sec) [ -9856.5993] [ 1326] [depth= 1] . ( 48 sec) [ -9832.0675] [ 1317] [depth= 3] . ( 48 sec) [ -9800.0661] [ 1310] [depth= 19] . ( 48 sec) [ -9799.1813] [ 1310] [depth= 3] . 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( 51 sec) [ -9068.1122] [ 1228] [depth= 5] . ( 51 sec) [ -8997.0370] [ 1206] [depth= 30] . ( 51 sec) [ -8958.4636] [ 1206] [depth= 1] . ( 52 sec) [ -8901.0913] [ 1206] [depth= 20] . ( 52 sec) [ -8894.9999] [ 1206] [depth= 18] . ( 52 sec) [ -8808.1283] [ 1192] [depth= 18] . ( 52 sec) [ -8805.8413] [ 1192] [depth= 1] . ( 52 sec) [ -8764.3307] [ 1192] [depth= 4] . ( 52 sec) [ -8655.3770] [ 1192] [depth= 4] . ( 52 sec) [ -8614.1962] [ 1178] [depth= 2] . ( 53 sec) [ -8578.7542] [ 1176] [depth= 4] . ( 53 sec) [ -8414.4006] [ 1145] [depth= 12] . ( 53 sec) [ -8274.4761] [ 1145] [depth= 23] . ( 53 sec) [ -8273.0615] [ 1145] [depth= 4] . ( 53 sec) [ -8211.9414] [ 1129] [depth= 11] . ( 53 sec) [ -8153.3857] [ 1112] [depth= 6] . ( 53 sec) [ -8101.7208] [ 1127] [depth= 1] . ( 53 sec) [ -8096.8566] [ 1127] [depth= 21] . ( 54 sec) [ -8052.6939] [ 1127] [depth= 16] . ( 54 sec) [ -7958.1908] [ 1099] [depth= 17] . ( 54 sec) [ -7934.9623] [ 1096] [depth= 4] . ( 54 sec) [ -7934.9275] [ 1096] [depth= 32] . ( 54 sec) [ -7929.6916] [ 1096] [depth= 3] . ( 54 sec) [ -7929.2006] [ 1096] [depth= 2] . ( 54 sec) [ -7905.1532] [ 1092] [depth= 10] . ( 55 sec) [ -7904.8004] [ 1092] [depth= 2] . ( 55 sec) [ -7902.3865] [ 1092] [depth= 13] . ( 55 sec) [ -7872.6900] [ 1091] [depth= 16] . ( 55 sec) [ -7831.4450] [ 1070] [depth= 9] . ( 55 sec) [ -7820.3928] [ 1069] [depth= 10] . ( 55 sec) [ -7676.6005] [ 1056] [depth= 15] . ( 55 sec) [ -7675.9352] [ 1056] [depth= 2] . ( 55 sec) [ -7651.6471] [ 1029] [depth= 2] . ( 56 sec) [ -7618.2457] [ 1027] [depth= 1] . ( 56 sec) [ -7617.0004] [ 1027] [depth= 3] . ( 56 sec) [ -7610.9802] [ 1028] [depth= 17] . ( 56 sec) [ -7560.1455] [ 1028] [depth= 7] . ( 56 sec) [ -7559.9645] [ 1027] [depth= 4] . ( 56 sec) [ -7512.3118] [ 1027] [depth= 3] . ( 57 sec) [ -7505.8737] [ 1026] [depth= 1] . ( 57 sec) [ -7424.7005] [ 1003] [depth= 26] . ( 57 sec) [ -7415.8666] [ 1002] [depth= 11] . ( 57 sec) [ -7325.5966] [ 1000] [depth= 5] . ( 57 sec) [ -7301.9082] [ 993] [depth= 1] . ( 57 sec) [ -7277.8334] [ 990] [depth= 8] . ( 58 sec) [ -7214.9173] [ 989] [depth= 2] . ( 58 sec) [ -7016.6244] [ 989] [depth= 22] . ( 58 sec) [ -7015.8451] [ 989] [depth= 1] . ( 58 sec) [ -7011.4940] [ 989] [depth= 22] . ( 58 sec) [ -7011.0399] [ 989] [depth= 15] . ( 59 sec) [ -7010.5277] [ 989] [depth= 17] . ( 59 sec) [ -7009.2726] [ 989] [depth= 16] . ( 59 sec) [ -7005.9230] [ 989] [depth= 6] . ( 59 sec) [ -7003.7376] [ 989] [depth= 22] . ( 59 sec) [ -6995.4409] [ 981] [depth= 4] . ( 59 sec) [ -6926.3136] [ 965] [depth= 9] . ( 59 sec) [ -6926.2904] [ 965] [depth= 3] . ( 60 sec) [ -6917.0074] [ 965] [depth= 1] . ( 60 sec) [ -6916.9027] [ 965] [depth= 5] . ( 60 sec) [ -6912.5596] [ 965] [depth= 4] . ( 60 sec) [ -6777.3067] [ 940] [depth= 9] . ( 60 sec) [ -6774.5137] [ 940] [depth= 1] . ( 60 sec) [ -6726.4079] [ 924] [depth= 4] . ( 60 sec) [ -6702.5839] [ 916] [depth= 12] . ( 60 sec) [ -6701.8844] [ 916] [depth= 2] . ( 61 sec) [ -6701.4535] [ 916] [depth= 1] . ( 61 sec) [ -6698.9102] [ 916] [depth= 2] . ( 61 sec) [ -6698.9000] [ 916] [depth= 2] . ( 61 sec) [ -6691.3342] [ 916] [depth= 3] . ( 61 sec) [ -6689.9573] [ 916] [depth= 7] . ( 61 sec) [ -6675.5505] [ 914] [depth= 22] . ( 61 sec) [ -6672.1809] [ 914] [depth= 7] . ( 61 sec) [ -6671.9312] [ 914] [depth= 6] . ( 62 sec) [ -6671.1503] [ 914] [depth= 3] . ( 63 sec) [ -6671.0881] [ 914] [depth= 13] . ( 63 sec) [ -6651.0192] [ 912] [depth= 2] . ( 63 sec) [ -6650.9094] [ 912] [depth= 2] . ( 63 sec) [ -6645.4540] [ 912] [depth= 8] . ( 63 sec) [ -6645.4123] [ 912] [depth= 22] . ( 63 sec) [ -6645.3712] [ 912] [depth= 20] . ( 64 sec) [ -6635.2400] [ 912] [depth= 12] . ( 64 sec) [ -6617.0878] [ 912] [depth= 3] . ( 64 sec) [ -6604.0612] [ 911] [depth= 16] . ( 64 sec) [ -6603.4684] [ 910] [depth= 5] . ( 64 sec) [ -6603.2417] [ 910] [depth= 3] . ( 64 sec) [ -6596.5778] [ 910] [depth= 4] . ( 65 sec) [ -6589.7948] [ 910] [depth= 2] . ( 65 sec) [ -6109.9287] [ 910] [depth= 20] . ( 65 sec) [ -6109.4981] [ 910] [depth= 14] . ( 65 sec) [ -6092.4559] [ 906] [depth= 2] . ( 66 sec) [ -6072.4339] [ 905] [depth= 14] . ( 66 sec) [ -6069.6805] [ 905] [depth= 12] . ( 66 sec) [ -6054.2585] [ 903] [depth= 10] . ( 66 sec) [ -6053.4683] [ 903] [depth= 6] . ( 66 sec) [ -5955.1543] [ 874] [depth= 19] . ( 66 sec) [ -5955.1385] [ 874] [depth= 17] . ( 67 sec) [ -5935.0084] [ 874] [depth= 6] . ( 67 sec) [ -5921.9558] [ 873] [depth= 7] . ( 67 sec) [ -5909.2015] [ 873] [depth= 2] . ( 67 sec) [ -5909.0778] [ 873] [depth= 1] . ( 67 sec) [ -5869.9785] [ 846] [depth= 11] . ( 68 sec) [ -5869.9367] [ 846] [depth= 12] . ( 68 sec) [ -5869.5578] [ 846] [depth= 4] . ( 68 sec) [ -5858.2329] [ 846] [depth= 10] . ( 68 sec) [ -5858.1912] [ 846] [depth= 10] . ( 69 sec) [ -5857.6290] [ 847] [depth= 1] . ( 69 sec) [ -5857.3440] [ 847] [depth= 1] . ( 69 sec) [ -5857.3312] [ 847] [depth= 25] . ( 69 sec) [ -5857.2415] [ 847] [depth= 4] . ( 70 sec) [ -5835.9528] [ 843] [depth= 1] . ( 70 sec) [ -5781.2548] [ 825] [depth= 2] . ( 70 sec) [ -5781.1644] [ 825] [depth= 1] . ( 70 sec) [ -5780.9421] [ 825] [depth= 1] . ( 70 sec) [ -5778.4936] [ 825] [depth= 3] . ( 70 sec) [ -5778.4732] [ 825] [depth= 1] . ( 71 sec) [ -5778.4440] [ 825] [depth= 2] . ( 71 sec) [ -5777.8664] [ 825] [depth= 4] . ( 71 sec) [ -5777.6195] [ 825] [depth= 1] . ( 72 sec) [ -5758.6798] [ 825] [depth= 4] . ( 72 sec) [ -5684.0350] [ 807] [depth= 23] . ( 72 sec) [ -5666.0833] [ 807] [depth= 6] . ( 72 sec) [ -5661.8214] [ 807] [depth= 1] . ( 72 sec) [ -5657.3687] [ 806] [depth= 9] . ( 72 sec) [ -5657.3506] [ 806] [depth= 6] . ( 72 sec) [ -5657.3347] [ 806] [depth= 4] . ( 72 sec) [ -5657.3122] [ 806] [depth= 5] . ( 73 sec) [ -5657.1069] [ 806] [depth= 4] . ( 73 sec) [ -5656.4330] [ 806] [depth= 2] . ( 74 sec) [ -5389.3298] [Branch lengths ] . ( 76 sec) [ -5372.5945] [GTR parameters ] . ( 76 sec) [ -5280.2772] [Alpha ][ 0.250961] . ( 79 sec) [ -5280.1709] [ 806] [depth= 5] . ( 82 sec) [ -5280.1372] [ 806] [depth= 1] . ( 82 sec) [ -5267.2172] [ 804] [depth= 7] . ( 83 sec) [ -5267.1441] [ 804] [depth= 3] . ( 84 sec) [ -5267.1052] [ 804] [depth= 1] . ( 84 sec) [ -5264.3688] [ 802] [depth= 12] . ( 84 sec) [ -5264.3318] [ 802] [depth= 4] . ( 84 sec) [ -5264.3173] [ 802] [depth= 4] . ( 85 sec) [ -5246.2568] [ 799] [depth= 8] . ( 86 sec) [ -5245.7774] [ 799] [depth= 1] . ( 86 sec) [ -5245.4586] [ 799] [depth= 1] . ( 88 sec) [ -5245.4439] [ 799] [depth= 12] . ( 89 sec) [ -5245.3210] [ 799] [depth= 1] . ( 89 sec) [ -5235.6422] [ 795] [depth= 11] . ( 89 sec) [ -5235.4251] [ 795] [depth= 2] . ( 89 sec) [ -5235.4138] [ 795] [depth= 3] . ( 91 sec) [ -5228.2437] [ 794] [depth= 9] . ( 91 sec) [ -5228.1682] [ 794] [depth= 4] . ( 92 sec) [ -5228.1198] [ 794] [depth= 3] . ( 92 sec) [ -5228.0862] [ 794] [depth= 1] . ( 92 sec) [ -5228.0757] [ 794] [depth= 2] . ( 93 sec) [ -5210.9204] [ 791] [depth= 16] . ( 93 sec) [ -5210.5636] [ 791] [depth= 5] . ( 94 sec) [ -5210.4706] [ 791] [depth= 11] . ( 94 sec) [ -5210.1042] [ 791] [depth= 8] . ( 95 sec) [ -5209.2238] [ 791] [depth= 9] . ( 95 sec) [ -5209.2060] [ 791] [depth= 9] . ( 95 sec) [ -5209.1269] [ 791] [depth= 7] . ( 95 sec) [ -5209.0689] [ 791] [depth= 6] . ( 96 sec) [ -5209.0560] [ 791] [depth= 3] . ( 99 sec) [ -5209.0443] [ 791] [depth= 3] . ( 99 sec) [ -5121.4203] [ 771] [depth= 29] . ( 100 sec) [ -5116.8589] [ 771] [depth= 3] . ( 100 sec) [ -5115.7227] [ 771] [depth= 4] . ( 103 sec) [ -5103.2521] [ 769] [depth= 8] . ( 103 sec) [ -5047.3912] [ 759] [depth= 25] . ( 103 sec) [ -5028.9284] [ 758] [depth= 6] . ( 104 sec) [ -5027.8711] [ 758] [depth= 9] . ( 105 sec) [ -5027.8063] [ 758] [depth= 1] . ( 105 sec) [ -5027.7579] [ 758] [depth= 6] . ( 106 sec) [ -4960.6489] [ 734] [depth= 34] . ( 106 sec) [ -4960.2435] [ 734] [depth= 5] . ( 106 sec) [ -4958.0741] [ 730] [depth= 3] . ( 106 sec) [ -4954.4775] [ 730] [depth= 1] . ( 106 sec) [ -4954.1466] [ 730] [depth= 3] . ( 107 sec) [ -4953.9729] [ 730] [depth= 1] . ( 107 sec) [ -4871.2132] [ 705] [depth= 48] . ( 107 sec) [ -4871.2018] [ 705] [depth= 2] . ( 107 sec) [ -4863.8739] [ 704] [depth= 1] . ( 107 sec) [ -4863.5963] [ 703] [depth= 2] . ( 107 sec) [ -4863.5855] [ 703] [depth= 2] . ( 108 sec) [ -4710.0776] [ 658] [depth= 7] . ( 108 sec) [ -4710.0592] [ 658] [depth= 13] . ( 109 sec) [ -4682.6212] [ 658] [depth= 2] . ( 110 sec) [ -4680.0240] [ 649] [depth= 1] . ( 110 sec) [ -4679.8247] [ 649] [depth= 11] . ( 110 sec) [ -4679.7409] [ 649] [depth= 2] . ( 110 sec) [ -4673.4162] [ 649] [depth= 2] . ( 111 sec) [ -4668.1795] [ 649] [depth= 10] . ( 111 sec) [ -4668.1117] [ 649] [depth= 12] . ( 111 sec) [ -4667.9189] [ 649] [depth= 3] . ( 112 sec) [ -4664.4779] [ 648] [depth= 8] . ( 112 sec) [ -4657.6342] [ 646] [depth= 25] . ( 112 sec) [ -4647.7864] [ 646] [depth= 1] . ( 112 sec) [ -4647.5545] [ 646] [depth= 1] . ( 114 sec) [ -4626.6789] [ 642] [depth= 10] . 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( 151 sec) [ -4208.5955] [ 519] [depth= 11] . ( 153 sec) [ -4203.8208] [ 519] [depth= 8] . ( 153 sec) [ -4203.6509] [ 519] [depth= 6] . ( 153 sec) [ -4203.6209] [ 519] [depth= 1] . ( 153 sec) [ -4203.6089] [ 519] [depth= 8] . ( 154 sec) [ -4203.5964] [ 519] [depth= 10] . ( 156 sec) [ -4146.4357] [ 508] [depth= 5] . ( 156 sec) [ -4146.3656] [ 508] [depth= 2] . ( 157 sec) [ -4146.3487] [ 508] [depth= 2] . ( 157 sec) [ -4146.2619] [ 508] [depth= 1] . ( 157 sec) [ -4145.1408] [ 508] [depth= 2] . ( 157 sec) [ -4137.7262] [ 507] [depth= 1] . ( 157 sec) [ -4136.2583] [ 507] [depth= 1] . ( 160 sec) [ -4136.2295] [ 507] [depth= 1] . ( 160 sec) [ -4136.2162] [ 507] [depth= 2] . ( 161 sec) [ -4136.1944] [ 507] [depth= 2] . ( 163 sec) [ -4136.1706] [ 507] [depth= 3] . ( 163 sec) [ -4136.1538] [ 507] [depth= 16] . ( 165 sec) [ -4135.7948] [ 507] [depth= 2] . ( 165 sec) [ -4135.6823] [ 507] [depth= 2] . ( 166 sec) [ -4135.2111] [ 507] [depth= 10] . ( 166 sec) [ -4135.1637] [ 507] [depth= 7] . ( 166 sec) [ -4135.1162] [ 507] [depth= 5] . ( 166 sec) [ -4135.1059] [ 507] [depth= 10] . ( 171 sec) [ -4132.4049] [ 507] [depth= 7] . ( 171 sec) [ -4132.3558] [ 507] [depth= 15] . ( 171 sec) [ -4026.8991] [ 475] [depth= 3] . ( 171 sec) [ -4022.9674] [ 475] [depth= 10] . ( 171 sec) [ -4022.9383] [ 475] [depth= 4] . ( 172 sec) [ -4016.4870] [ 473] [depth= 8] . ( 173 sec) [ -4016.4588] [ 473] [depth= 1] . ( 173 sec) [ -4015.7318] [ 473] [depth= 2] . ( 173 sec) [ -3916.9612] [ 446] [depth= 14] . ( 173 sec) [ -3916.9413] [ 446] [depth= 8] . ( 173 sec) [ -3915.4422] [ 446] [depth= 1] . ( 174 sec) [ -3915.4037] [ 446] [depth= 8] . ( 176 sec) [ -3915.3700] [ 446] [depth= 1] . ( 177 sec) [ -3915.3559] [ 446] [depth= 4] . ( 177 sec) [ -3899.9095] [ 443] [depth= 4] . ( 178 sec) [ -3899.6245] [ 443] [depth= 2] . ( 178 sec) [ -3899.5977] [ 443] [depth= 2] . ( 178 sec) [ -3899.5851] [ 443] [depth= 2] . ( 179 sec) [ -3899.5030] [ 443] [depth= 6] . ( 179 sec) [ -3899.4009] [ 443] [depth= 1] . ( 179 sec) [ -3899.2334] [ 443] [depth= 3] . ( 180 sec) [ -3898.5500] [ 443] [depth= 2] . ( 180 sec) [ -3898.1954] [ 443] [depth= 6] . ( 180 sec) [ -3898.1399] [ 444] [depth= 5] . ( 181 sec) [ -3898.0788] [ 444] [depth= 5] . ( 181 sec) [ -3898.0603] [ 444] [depth= 24] . ( 183 sec) [ -3897.9349] [ 444] [depth= 4] . ( 184 sec) [ -3859.3109] [ 432] [depth= 4] . ( 186 sec) [ -3859.2935] [ 432] [depth= 8] . ( 187 sec) [ -3859.1976] [ 432] [depth= 4] . ( 187 sec) [ -3859.1755] [ 432] [depth= 2] . ( 187 sec) [ -3853.3602] [ 432] [depth= 1] . ( 188 sec) [ -3853.3419] [ 432] [depth= 1] . ( 188 sec) [ -3853.3306] [ 432] [depth= 12] . ( 189 sec) [ -3851.0593] [ 431] [depth= 3] . ( 190 sec) [ -3850.9980] [ 431] [depth= 10] . ( 191 sec) [ -3850.9879] [ 431] [depth= 1] . ( 192 sec) [ -3850.6971] [ 431] [depth= 5] . ( 192 sec) [ -3850.6640] [ 431] [depth= 8] . ( 193 sec) [ -3850.5412] [ 431] [depth= 1] . ( 193 sec) [ -3844.9353] [ 431] [depth= 2] . ( 193 sec) [ -3844.0316] [ 431] [depth= 1] . ( 194 sec) [ -3844.0013] [ 431] [depth= 6] . ( 198 sec) [ -3843.9547] [ 431] [depth= 5] . ( 198 sec) [ -3843.9225] [ 431] [depth= 3] . ( 198 sec) [ -3843.8629] [ 431] [depth= 5] . ( 199 sec) [ -3843.5868] [ 431] [depth= 12] . ( 199 sec) [ -3843.4969] [ 431] [depth= 3] . ( 199 sec) [ -3826.2287] [ 421] [depth= 2] . ( 199 sec) [ -3826.2065] [ 421] [depth= 3] . ( 200 sec) [ -3826.1747] [ 421] [depth= 2] . ( 204 sec) [ -3826.1378] [ 421] [depth= 9] . ( 205 sec) [ -3826.0713] [ 421] [depth= 1] . ( 205 sec) [ -3825.9009] [ 421] [depth= 1] . ( 206 sec) [ -3825.8394] [ 421] [depth= 1] . ( 207 sec) [ -3825.7739] [ 421] [depth= 2] . ( 207 sec) [ -3825.7527] [ 421] [depth= 1] . ( 208 sec) [ -3824.2709] [ 422] [depth= 1] . ( 208 sec) [ -3824.2480] [ 422] [depth= 2] . ( 208 sec) [ -3789.7924] [ 419] [depth= 3] . ( 208 sec) [ -3787.8586] [ 416] [depth= 3] . ( 209 sec) [ -3783.1497] [ 416] [depth= 2] . ( 210 sec) [ -3778.3544] [ 419] [depth= 5] . ( 211 sec) [ -3770.5820] [ 417] [depth= 5] . ( 212 sec) [ -3770.5474] [ 417] [depth= 2] . ( 212 sec) [ -3770.4971] [ 417] [depth= 1] . ( 212 sec) [ -3756.0940] [ 417] [depth= 2] . ( 213 sec) [ -3749.8384] [ 415] [depth= 2] . ( 213 sec) [ -3729.2007] [ 405] [depth= 2] . ( 214 sec) [ -3729.1829] [ 405] [depth= 8] . ( 215 sec) [ -3700.1271] [ 399] [depth= 3] . ( 217 sec) [ -3700.0920] [ 399] [depth= 3] . ( 220 sec) [ -3700.0811] [ 399] [depth= 4] . ( 224 sec) [ -3699.8997] [ 399] [depth= 1] . ( 224 sec) [ -3699.8871] [ 399] [depth= 1] . ( 225 sec) [ -3699.8688] [ 399] [depth= 1] . ( 226 sec) [ -3695.2824] [ 395] [depth= 4] . ( 227 sec) [ -3694.4459] [ 395] [depth= 1] . ( 228 sec) [ -3694.3230] [ 395] [depth= 1] . ( 228 sec) [ -3688.6703] [ 395] [depth= 1] . ( 228 sec) [ -3688.6575] [ 395] [depth= 1] . ( 229 sec) [ -3688.6425] [ 395] [depth= 8] . ( 230 sec) [ -3688.5441] [ 395] [depth= 2] . ( 230 sec) [ -3688.5239] [ 395] [depth= 1] . ( 232 sec) [ -3686.1668] [ 396] [depth= 1] . ( 235 sec) [ -3686.0259] [ 396] [depth= 1] . ( 235 sec) [ -3686.0099] [ 396] [depth= 1] . ( 236 sec) [ -3673.9373] [ 393] [depth= 3] . ( 236 sec) [ -3673.9039] [ 393] [depth= 1] . ( 237 sec) [ -3668.8781] [ 392] [depth= 8] . ( 237 sec) [ -3668.7199] [ 392] [depth= 3] . ( 238 sec) [ -3668.6687] [ 392] [depth= 7] . ( 239 sec) [ -3668.6523] [ 392] [depth= 1] . ( 240 sec) [ -3668.6368] [ 392] [depth= 9] . ( 240 sec) [ -3668.6212] [ 392] [depth= 12] . ( 241 sec) [ -3614.3621] [Branch lengths ] . ( 243 sec) [ -3613.0808] [GTR parameters ] . ( 243 sec) [ -3606.0819] [Alpha ][ 0.419668] . ( 251 sec) [ -3606.0617] [ 392] [depth= 7] . ( 253 sec) [ -3606.0509] [ 392] [depth= 7] . ( 255 sec) [ -3598.5509] [ 390] [depth= 1] . ( 259 sec) [ -3598.5399] [ 390] [depth= 1] . ( 261 sec) [ -3596.9166] [ 391] [depth= 1] . ( 262 sec) [ -3595.5077] [ 391] [depth= 7] . ( 268 sec) [ -3595.0431] [ 391] [depth= 1] . ( 269 sec) [ -3595.0308] [ 391] [depth= 4] . ( 279 sec) [ -3552.8011] [ 381] [depth= 2] . ( 279 sec) [ -3552.7784] [ 381] [depth= 3] . ( 282 sec) [ -3549.4630] [ 380] [depth= 2] . ( 285 sec) [ -3549.1485] [ 381] [depth= 1] . ( 285 sec) [ -3548.7953] [ 377] [depth= 1] . ( 298 sec) [ -3547.5502] [ 376] [depth= 2] . ( 310 sec) [ -3544.4366] [ 375] [depth= 1] . ( 312 sec) [ -3544.4259] [ 375] [depth= 3] . ( 319 sec) [ -3544.3606] [ 375] [depth= 5] . ( 319 sec) [ -3528.9536] [ 371] [depth= 2] . ( 325 sec) [ -3527.3838] [ 370] [depth= 2] . ( 328 sec) [ -3527.2834] [ 374] [depth= 1] . ( 328 sec) [ -3527.2620] [ 374] [depth= 3] . ( 331 sec) [ -3520.5468] [ 373] [depth= 5] . ( 331 sec) [ -3520.4213] [ 373] [depth= 1] . ( 334 sec) [ -3520.4034] [ 373] [depth= 4] . ( 336 sec) [ -3520.3763] [ 373] [depth= 1] . ( 340 sec) [ -3520.3647] [ 373] [depth= 5] . ( 360 sec) [ -3520.3465] [ 373] [depth= 4] . ( 364 sec) [ -3520.3344] [ 373] [depth= 2] . ( 377 sec) [ -3520.3241] [ 373] [depth= 1] . ( 386 sec) [ -3515.5256] [ 371] [depth= 2] . ( 400 sec) [ -3515.4913] [ 371] [depth= 3] . ( 403 sec) [ -3515.4622] [ 371] [depth= 5] . ( 417 sec) [ -3515.0412] [ 371] [depth= 1] . ( 423 sec) [ -3514.9411] [ 371] [depth= 4] . ( 428 sec) [ -3514.8251] [ 371] [depth= 1] . ( 434 sec) [ -3514.5553] [ 371] [depth= 2] . ( 437 sec) [ -3514.0834] [ 369] [depth= 1] . ( 451 sec) [ -3514.0654] [ 369] [depth= 1] . ( 455 sec) [ -3513.9931] [ 369] [depth= 3] . ( 470 sec) [ -3509.6021] [Branch lengths ] . ( 471 sec) [ -3509.5172] [GTR parameters ] . ( 472 sec) [ -3508.1610] [Alpha ][ 0.562607] . ( 515 sec) [ -3508.1383] [ 369] [depth= 1] . ( 698 sec) [ -3508.0513] [Branch lengths ] . ( 699 sec) [ -3508.0308] [GTR parameters ] . ( 699 sec) [ -3508.0273] [Alpha ][ 0.571769] . ( 825 sec) [ -3508.0233] [Branch lengths ] . ( 825 sec) [ -3508.0233] [Topology ] . ( 827 sec) [ -3508.0232] [Topology ] . ( 828 sec) [ -3508.0231] [GTR parameters ] . ( 829 sec) [ -3508.0231] [Alpha ][ 0.571769] . Checking for NNIs, optimizing five branches... . Log likelihood of the current tree: -3508.023087. . [Random start 2/ 5] . Computing pairwise distances... . Building BioNJ tree... . Randomising the tree... . Maximizing likelihood (using SPR moves)... . ( 5 sec) [ -53070.1122] [GTR parameters ] . ( 6 sec) [ -52467.4142] [Alpha ][ 0.500960] . ( 6 sec) [ -52036.0570] [ 3121] [depth= 6] . ( 6 sec) [ -51939.9358] [ 3105] [depth= 8] . ( 6 sec) [ -51421.5059] [ 3104] [depth= 3] . ( 6 sec) [ -51154.5419] [ 3104] [depth= 2] . ( 7 sec) [ -51093.5806] [ 3104] [depth= 4] . ( 7 sec) [ -51040.5460] [ 3103] [depth= 6] . ( 7 sec) [ -50957.8513] [ 3100] [depth= 12] . ( 7 sec) [ -50564.4218] [ 3099] [depth= 7] . ( 7 sec) [ -50105.4731] [ 3096] [depth= 10] . ( 7 sec) [ -50023.0367] [ 3096] [depth= 5] . ( 7 sec) [ -49606.7718] [ 3096] [depth= 2] . ( 7 sec) [ -49167.8387] [ 3095] [depth= 1] . ( 7 sec) [ -48185.3286] [ 3088] [depth= 5] . ( 8 sec) [ -47247.4482] [ 3088] [depth= 7] . ( 8 sec) [ -47072.5171] [ 3083] [depth= 6] . ( 8 sec) [ -47065.4514] [ 3081] [depth= 5] . ( 8 sec) [ -47064.2291] [ 3079] [depth= 9] . ( 8 sec) [ -46940.8897] [ 3078] [depth= 10] . ( 8 sec) [ -46901.7848] [ 3077] [depth= 5] . ( 8 sec) [ -46824.8954] [ 3077] [depth= 2] . ( 8 sec) [ -46608.4150] [ 3076] [depth= 12] . ( 9 sec) [ -46449.1714] [ 3076] [depth= 1] . ( 9 sec) [ -46126.2001] [ 3072] [depth= 5] . ( 9 sec) [ -45904.5202] [ 3072] [depth= 1] . ( 9 sec) [ -45710.1131] [ 3072] [depth= 6] . ( 9 sec) [ -45595.8758] [ 3058] [depth= 2] . ( 9 sec) [ -45409.1954] [ 3055] [depth= 5] . ( 9 sec) [ -45252.9526] [ 3068] [depth= 1] . ( 9 sec) [ -44541.2152] [ 3037] [depth= 12] . ( 9 sec) [ -44128.7126] [ 3013] [depth= 10] . ( 10 sec) [ -44091.7921] [ 3008] [depth= 9] . ( 10 sec) [ -44000.7819] [ 2993] [depth= 9] . ( 10 sec) [ -43936.5919] [ 2980] [depth= 5] . ( 10 sec) [ -43745.4227] [ 2977] [depth= 19] . ( 10 sec) [ -42839.0648] [ 2930] [depth= 3] . ( 10 sec) [ -42348.2672] [ 2930] [depth= 34] . ( 10 sec) [ -42341.5672] [ 2929] [depth= 1] . ( 11 sec) [ -41787.5072] [ 2910] [depth= 8] . ( 11 sec) [ -41322.8392] [ 2874] [depth= 33] . ( 11 sec) [ -40833.6643] [ 2858] [depth= 8] . ( 11 sec) [ -40743.5480] [ 2846] [depth= 10] . ( 11 sec) [ -39972.1388] [ 2837] [depth= 4] . ( 11 sec) [ -39362.2061] [ 2828] [depth= 9] . ( 11 sec) [ -39212.1543] [ 2820] [depth= 16] . ( 11 sec) [ -39190.9418] [ 2819] [depth= 5] . ( 12 sec) [ -38994.2080] [ 2809] [depth= 20] . ( 12 sec) [ -38926.6256] [ 2793] [depth= 7] . ( 12 sec) [ -38924.3911] [ 2793] [depth= 1] . ( 12 sec) [ -38924.2544] [ 2793] [depth= 1] . ( 12 sec) [ -38923.9484] [ 2793] [depth= 9] . ( 12 sec) [ -38606.6902] [ 2785] [depth= 2] . ( 12 sec) [ -38498.4808] [ 2778] [depth= 18] . ( 12 sec) [ -38137.2803] [ 2768] [depth= 10] . ( 13 sec) [ -38136.3802] [ 2767] [depth= 5] . ( 13 sec) [ -38119.1036] [ 2767] [depth= 4] . ( 13 sec) [ -38034.8907] [ 2762] [depth= 4] . ( 13 sec) [ -37900.0361] [ 2762] [depth= 8] . ( 13 sec) [ -37897.9578] [ 2760] [depth= 14] . ( 13 sec) [ -37775.9013] [ 2760] [depth= 1] . ( 13 sec) [ -37413.4158] [ 2760] [depth= 17] . ( 14 sec) [ -36730.5126] [ 2741] [depth= 16] . ( 14 sec) [ -36606.1110] [ 2732] [depth= 13] . ( 14 sec) [ -36249.8287] [ 2722] [depth= 17] . ( 14 sec) [ -36175.1297] [ 2722] [depth= 8] . ( 14 sec) [ -36078.4792] [ 2716] [depth= 12] . ( 14 sec) [ -35756.6012] [ 2695] [depth= 16] . ( 14 sec) [ -35717.3689] [ 2682] [depth= 13] . ( 14 sec) [ -35655.7400] [ 2668] [depth= 6] . ( 15 sec) [ -35572.4223] [ 2659] [depth= 16] . ( 15 sec) [ -35356.6103] [ 2643] [depth= 6] . ( 15 sec) [ -35279.5467] [ 2630] [depth= 20] . ( 15 sec) [ -35212.6845] [ 2612] [depth= 11] . ( 15 sec) [ -35207.7561] [ 2612] [depth= 30] . ( 15 sec) [ -35149.2305] [ 2604] [depth= 17] . ( 15 sec) [ -34349.6278] [ 2588] [depth= 19] . ( 15 sec) [ -34338.2172] [ 2588] [depth= 3] . ( 16 sec) [ -34334.5565] [ 2588] [depth= 11] . ( 16 sec) [ -34076.9800] [ 2588] [depth= 1] . ( 16 sec) [ -33685.6429] [ 2562] [depth= 20] . ( 16 sec) [ -33532.3813] [ 2549] [depth= 14] . ( 16 sec) [ -33531.3212] [ 2549] [depth= 1] . ( 16 sec) [ -33530.6882] [ 2549] [depth= 11] . ( 16 sec) [ -33530.6423] [ 2549] [depth= 1] . ( 16 sec) [ -33512.5140] [ 2546] [depth= 12] . ( 17 sec) [ -33017.8716] [ 2533] [depth= 16] . ( 17 sec) [ -32924.1514] [ 2521] [depth= 14] . ( 17 sec) [ -32924.0335] [ 2521] [depth= 11] . ( 17 sec) [ -32924.0160] [ 2521] [depth= 10] . ( 17 sec) [ -30716.5138] [ 2493] [depth= 22] . ( 17 sec) [ -30661.0698] [ 2479] [depth= 9] . ( 17 sec) [ -30086.4183] [ 2448] [depth= 15] . ( 18 sec) [ -30071.7669] [ 2447] [depth= 1] . ( 18 sec) [ -29951.9939] [ 2441] [depth= 2] . ( 18 sec) [ -28612.5257] [ 2404] [depth= 19] . ( 18 sec) [ -28567.8734] [ 2405] [depth= 27] . ( 18 sec) [ -28508.2763] [ 2395] [depth= 1] . ( 18 sec) [ -28492.4895] [ 2392] [depth= 4] . ( 18 sec) [ -28450.9898] [ 2381] [depth= 16] . ( 18 sec) [ -28448.5332] [ 2381] [depth= 1] . ( 19 sec) [ -28347.3954] [ 2378] [depth= 15] . ( 19 sec) [ -28346.5724] [ 2378] [depth= 2] . ( 19 sec) [ -28304.5632] [ 2378] [depth= 26] . ( 19 sec) [ -28300.4474] [ 2369] [depth= 15] . ( 19 sec) [ -28300.3851] [ 2369] [depth= 1] . ( 19 sec) [ -28299.6782] [ 2369] [depth= 17] . ( 19 sec) [ -28299.6302] [ 2369] [depth= 18] . ( 20 sec) [ -28299.5880] [ 2369] [depth= 26] . ( 20 sec) [ -28298.7700] [ 2369] [depth= 17] . ( 20 sec) [ -28210.9361] [ 2356] [depth= 6] . ( 20 sec) [ -27744.0637] [ 2321] [depth= 10] . ( 20 sec) [ -27719.0706] [ 2321] [depth= 9] . ( 20 sec) [ -27361.5617] [ 2321] [depth= 3] . ( 20 sec) [ -27254.6518] [ 2304] [depth= 3] . ( 20 sec) [ -27225.9726] [ 2284] [depth= 11] . ( 21 sec) [ -27059.3076] [ 2284] [depth= 1] . ( 21 sec) [ -26366.5355] [ 2284] [depth= 2] . ( 21 sec) [ -26316.9942] [ 2279] [depth= 15] . ( 21 sec) [ -25853.8067] [ 2279] [depth= 3] . ( 21 sec) [ -25783.6474] [ 2279] [depth= 3] . ( 21 sec) [ -25685.9585] [ 2263] [depth= 6] . ( 21 sec) [ -25359.4774] [ 2263] [depth= 3] . ( 21 sec) [ -25055.0410] [ 2263] [depth= 9] . ( 22 sec) [ -24879.5861] [ 2261] [depth= 16] . ( 22 sec) [ -24196.6900] [ 2261] [depth= 1] . ( 22 sec) [ -23827.3156] [ 2247] [depth= 2] . ( 22 sec) [ -23791.0994] [ 2250] [depth= 2] . ( 22 sec) [ -23710.8240] [ 2238] [depth= 14] . ( 22 sec) [ -23471.3101] [ 2239] [depth= 3] . ( 22 sec) [ -23286.9974] [ 2220] [depth= 5] . ( 22 sec) [ -22910.7112] [ 2179] [depth= 12] . ( 23 sec) [ -22680.9693] [ 2177] [depth= 19] . ( 23 sec) [ -22605.9917] [ 2178] [depth= 20] . ( 23 sec) [ -22509.5526] [ 2174] [depth= 27] . ( 23 sec) [ -21991.0935] [ 2170] [depth= 27] . ( 23 sec) [ -21964.1467] [ 2170] [depth= 1] . ( 23 sec) [ -21927.2549] [ 2159] [depth= 18] . ( 23 sec) [ -21925.9708] [ 2159] [depth= 1] . ( 24 sec) [ -21848.6206] [ 2143] [depth= 7] . ( 24 sec) [ -21836.6855] [ 2143] [depth= 1] . ( 24 sec) [ -21821.3898] [ 2142] [depth= 17] . ( 24 sec) [ -21801.6306] [ 2142] [depth= 1] . ( 24 sec) [ -21792.7258] [ 2142] [depth= 5] . ( 24 sec) [ -21583.4114] [ 2139] [depth= 8] . ( 24 sec) [ -21526.9810] [ 2134] [depth= 16] . ( 24 sec) [ -21525.3135] [ 2134] [depth= 3] . ( 25 sec) [ -21523.4910] [ 2134] [depth= 15] . ( 25 sec) [ -21517.1074] [ 2134] [depth= 1] . ( 25 sec) [ -21481.9499] [ 2134] [depth= 6] . ( 25 sec) [ -21404.6268] [ 2118] [depth= 8] . ( 25 sec) [ -21401.8968] [ 2118] [depth= 3] . ( 25 sec) [ -21401.8126] [ 2118] [depth= 11] . ( 25 sec) [ -21304.5117] [ 2092] [depth= 10] . ( 25 sec) [ -21292.9417] [ 2092] [depth= 5] . ( 26 sec) [ -21291.3151] [ 2092] [depth= 14] . ( 26 sec) [ -21151.8373] [ 2089] [depth= 8] . ( 26 sec) [ -20795.2887] [ 2089] [depth= 1] . ( 26 sec) [ -20727.7288] [ 2073] [depth= 4] . ( 26 sec) [ -20700.9298] [ 2058] [depth= 5] . ( 26 sec) [ -20608.0257] [ 2056] [depth= 23] . ( 26 sec) [ -20505.1495] [ 2044] [depth= 19] . ( 26 sec) [ -19803.0419] [ 2015] [depth= 8] . ( 27 sec) [ -19798.0912] [ 2015] [depth= 1] . ( 27 sec) [ -19482.5697] [ 2000] [depth= 20] . ( 27 sec) [ -19324.6626] [ 1969] [depth= 18] . ( 27 sec) [ -19280.5731] [ 1955] [depth= 17] . ( 27 sec) [ -19273.4847] [ 1955] [depth= 26] . ( 27 sec) [ -19272.7008] [ 1955] [depth= 18] . ( 27 sec) [ -19215.3683] [ 1942] [depth= 29] . ( 28 sec) [ -19215.3208] [ 1942] [depth= 3] . ( 28 sec) [ -19071.0040] [ 1938] [depth= 2] . ( 28 sec) [ -18906.1114] [ 1916] [depth= 19] . ( 28 sec) [ -18906.0773] [ 1901] [depth= 2] . ( 28 sec) [ -18906.0642] [ 1901] [depth= 2] . ( 28 sec) [ -18686.7905] [ 1899] [depth= 3] . ( 28 sec) [ -18481.4813] [ 1899] [depth= 1] . ( 28 sec) [ -18417.6420] [ 1887] [depth= 20] . ( 28 sec) [ -18409.2619] [ 1887] [depth= 2] . ( 29 sec) [ -18355.2864] [ 1887] [depth= 1] . ( 29 sec) [ -18220.7183] [ 1887] [depth= 1] . ( 29 sec) [ -18033.0830] [ 1879] [depth= 29] . ( 29 sec) [ -18009.5981] [ 1876] [depth= 13] . ( 29 sec) [ -18009.1979] [ 1876] [depth= 3] . ( 29 sec) [ -17929.1356] [ 1876] [depth= 1] . ( 29 sec) [ -17457.4286] [ 1849] [depth= 31] . ( 29 sec) [ -17351.9824] [ 1843] [depth= 3] . ( 30 sec) [ -17256.9269] [ 1834] [depth= 7] . ( 30 sec) [ -16974.6560] [ 1843] [depth= 1] . ( 30 sec) [ -16802.3740] [ 1843] [depth= 2] . ( 30 sec) [ -16154.4946] [ 1809] [depth= 10] . ( 30 sec) [ -16138.8015] [ 1791] [depth= 24] . ( 30 sec) [ -16107.0981] [ 1791] [depth= 1] . ( 30 sec) [ -16050.0208] [ 1791] [depth= 10] . ( 30 sec) [ -15958.2154] [ 1789] [depth= 25] . ( 31 sec) [ -15892.2987] [ 1789] [depth= 1] . ( 31 sec) [ -15788.7274] [ 1789] [depth= 2] . ( 31 sec) [ -15788.7110] [ 1789] [depth= 1] . ( 31 sec) [ -15767.4858] [ 1786] [depth= 18] . ( 31 sec) [ -15757.1311] [ 1787] [depth= 1] . ( 31 sec) [ -15702.8687] [ 1768] [depth= 7] . ( 31 sec) [ -15651.7008] [ 1768] [depth= 1] . ( 31 sec) [ -15506.7736] [ 1727] [depth= 14] . ( 32 sec) [ -15506.5999] [ 1727] [depth= 18] . ( 32 sec) [ -15486.9244] [ 1711] [depth= 8] . ( 32 sec) [ -15414.8431] [ 1715] [depth= 1] . ( 32 sec) [ -15315.8912] [ 1687] [depth= 9] . ( 32 sec) [ -15315.1726] [ 1687] [depth= 5] . ( 32 sec) [ -15308.3509] [ 1687] [depth= 17] . ( 32 sec) [ -15286.4237] [ 1684] [depth= 12] . ( 32 sec) [ -15252.1550] [ 1687] [depth= 12] . ( 33 sec) [ -15108.3196] [ 1662] [depth= 30] . ( 33 sec) [ -15105.0594] [ 1662] [depth= 1] . ( 33 sec) [ -15086.7361] [ 1659] [depth= 27] . ( 33 sec) [ -15083.9975] [ 1659] [depth= 1] . ( 33 sec) [ -15081.9028] [ 1659] [depth= 1] . ( 33 sec) [ -14854.4524] [ 1646] [depth= 30] . ( 33 sec) [ -14629.0063] [ 1644] [depth= 22] . ( 33 sec) [ -14609.5488] [ 1637] [depth= 13] . ( 34 sec) [ -14590.7724] [ 1636] [depth= 2] . ( 34 sec) [ -14590.0826] [ 1636] [depth= 23] . ( 34 sec) [ -14449.3190] [ 1633] [depth= 8] . ( 34 sec) [ -14335.7024] [ 1633] [depth= 28] . ( 34 sec) [ -14331.2840] [ 1634] [depth= 2] . ( 34 sec) [ -14203.0646] [ 1609] [depth= 16] . ( 34 sec) [ -13896.3516] [ 1566] [depth= 3] . ( 34 sec) [ -13894.5214] [ 1566] [depth= 2] . ( 35 sec) [ -13862.6393] [ 1566] [depth= 1] . ( 35 sec) [ -13841.1826] [ 1577] [depth= 1] . ( 35 sec) [ -13836.8876] [ 1577] [depth= 24] . ( 35 sec) [ -13505.8159] [ 1536] [depth= 15] . ( 35 sec) [ -13432.6987] [ 1520] [depth= 18] . ( 35 sec) [ -13429.7182] [ 1520] [depth= 1] . ( 35 sec) [ -13426.6712] [ 1521] [depth= 2] . ( 35 sec) [ -13411.7072] [ 1521] [depth= 1] . ( 36 sec) [ -13402.9435] [ 1521] [depth= 3] . ( 36 sec) [ -13118.6422] [ 1495] [depth= 20] . ( 36 sec) [ -12750.6323] [ 1479] [depth= 7] . ( 36 sec) [ -12699.1823] [ 1479] [depth= 1] . ( 36 sec) [ -12588.3594] [ 1480] [depth= 24] . ( 36 sec) [ -12582.4523] [ 1476] [depth= 11] . ( 36 sec) [ -12525.2602] [ 1465] [depth= 1] . ( 36 sec) [ -12522.4427] [ 1462] [depth= 15] . ( 37 sec) [ -12450.0017] [ 1460] [depth= 6] . ( 37 sec) [ -12440.3063] [ 1460] [depth= 1] . ( 37 sec) [ -12369.5645] [ 1459] [depth= 4] . ( 37 sec) [ -12338.6287] [ 1459] [depth= 11] . ( 37 sec) [ -12299.1386] [ 1459] [depth= 2] . ( 37 sec) [ -11987.0128] [ 1440] [depth= 3] . ( 37 sec) [ -11974.5934] [ 1441] [depth= 8] . ( 37 sec) [ -11974.1859] [ 1441] [depth= 2] . ( 38 sec) [ -11939.4098] [ 1443] [depth= 2] . ( 38 sec) [ -11916.9461] [ 1443] [depth= 14] . ( 38 sec) [ -11916.5180] [ 1443] [depth= 2] . ( 38 sec) [ -11803.4280] [ 1418] [depth= 13] . ( 38 sec) [ -11803.2954] [ 1418] [depth= 22] . ( 38 sec) [ -11803.2825] [ 1418] [depth= 1] . ( 38 sec) [ -11803.2092] [ 1418] [depth= 1] . ( 39 sec) [ -11790.8186] [ 1418] [depth= 1] . ( 39 sec) [ -11772.8897] [ 1418] [depth= 14] . ( 39 sec) [ -11745.1744] [ 1415] [depth= 2] . ( 39 sec) [ -11635.5194] [ 1415] [depth= 17] . ( 39 sec) [ -11611.1635] [ 1418] [depth= 4] . ( 39 sec) [ -11579.0148] [ 1413] [depth= 17] . ( 39 sec) [ -11530.3964] [ 1400] [depth= 5] . ( 39 sec) [ -11513.6471] [ 1400] [depth= 1] . ( 40 sec) [ -11500.8189] [ 1400] [depth= 1] . ( 40 sec) [ -11432.1158] [ 1399] [depth= 22] . ( 40 sec) [ -11429.3038] [ 1399] [depth= 4] . ( 40 sec) [ -11428.9781] [ 1399] [depth= 4] . ( 40 sec) [ -11428.6351] [ 1399] [depth= 1] . ( 40 sec) [ -11428.5557] [ 1399] [depth= 2] . ( 40 sec) [ -11428.5414] [ 1399] [depth= 2] . ( 40 sec) [ -11421.8995] [ 1399] [depth= 9] . ( 41 sec) [ -11392.9588] [ 1396] [depth= 24] . ( 41 sec) [ -11392.2494] [ 1396] [depth= 2] . ( 41 sec) [ -11296.4712] [ 1371] [depth= 19] . ( 41 sec) [ -11223.6464] [ 1371] [depth= 1] . ( 41 sec) [ -11221.6872] [ 1371] [depth= 4] . ( 41 sec) [ -11221.3728] [ 1371] [depth= 2] . ( 41 sec) [ -11199.1215] [ 1371] [depth= 19] . ( 41 sec) [ -10839.2532] [ 1373] [depth= 19] . ( 42 sec) [ -10839.2418] [ 1373] [depth= 2] . ( 42 sec) [ -10786.3170] [ 1372] [depth= 26] . ( 42 sec) [ -10785.1554] [ 1372] [depth= 6] . ( 42 sec) [ -10781.6082] [ 1372] [depth= 12] . ( 42 sec) [ -10698.1469] [ 1348] [depth= 10] . ( 42 sec) [ -10693.2324] [ 1348] [depth= 2] . ( 42 sec) [ -10537.6168] [ 1322] [depth= 2] . ( 43 sec) [ -10537.5271] [ 1322] [depth= 7] . ( 43 sec) [ -10527.9471] [ 1321] [depth= 8] . ( 43 sec) [ -10493.0166] [ 1314] [depth= 4] . ( 43 sec) [ -10492.2933] [ 1314] [depth= 4] . ( 43 sec) [ -10492.2242] [ 1314] [depth= 2] . ( 43 sec) [ -10475.3277] [ 1314] [depth= 17] . ( 43 sec) [ -10227.2015] [ 1314] [depth= 30] . ( 44 sec) [ -10223.4111] [ 1314] [depth= 21] . ( 44 sec) [ -10219.9451] [ 1314] [depth= 16] . ( 44 sec) [ -10208.4006] [ 1314] [depth= 2] . ( 44 sec) [ -9997.4018] [ 1314] [depth= 1] . ( 44 sec) [ -9825.8332] [ 1285] [depth= 34] . ( 44 sec) [ -9728.3888] [ 1274] [depth= 25] . ( 44 sec) [ -9726.6351] [ 1274] [depth= 1] . ( 44 sec) [ -9716.1023] [ 1274] [depth= 2] . ( 45 sec) [ -9716.0851] [ 1274] [depth= 46] . ( 45 sec) [ -9694.2646] [ 1270] [depth= 4] . ( 45 sec) [ -9694.2443] [ 1270] [depth= 3] . ( 45 sec) [ -9679.4750] [ 1271] [depth= 27] . ( 45 sec) [ -9653.2367] [ 1271] [depth= 1] . ( 45 sec) [ -9526.2702] [ 1258] [depth= 12] . ( 45 sec) [ -9520.4546] [ 1257] [depth= 19] . ( 45 sec) [ -9515.3091] [ 1257] [depth= 10] . ( 46 sec) [ -9514.2044] [ 1257] [depth= 7] . ( 46 sec) [ -9497.9276] [ 1253] [depth= 23] . ( 46 sec) [ -9497.8720] [ 1253] [depth= 14] . ( 46 sec) [ -9495.6532] [ 1253] [depth= 5] . ( 46 sec) [ -9489.8943] [ 1253] [depth= 1] . ( 47 sec) [ -9484.4974] [ 1257] [depth= 1] . ( 47 sec) [ -9477.1721] [ 1256] [depth= 24] . ( 47 sec) [ -9471.2004] [ 1252] [depth= 1] . ( 47 sec) [ -9362.7640] [ 1225] [depth= 5] . ( 47 sec) [ -9361.9656] [ 1225] [depth= 3] . ( 47 sec) [ -9351.7816] [ 1221] [depth= 1] . ( 47 sec) [ -9350.3113] [ 1221] [depth= 1] . ( 48 sec) [ -9252.1954] [ 1203] [depth= 11] . ( 48 sec) [ -9248.1496] [ 1203] [depth= 2] . ( 48 sec) [ -9238.0738] [ 1203] [depth= 12] . ( 48 sec) [ -9180.7916] [ 1198] [depth= 17] . ( 48 sec) [ -9177.3662] [ 1198] [depth= 28] . ( 48 sec) [ -9048.6865] [ 1171] [depth= 12] . ( 48 sec) [ -9042.5924] [ 1170] [depth= 2] . ( 48 sec) [ -9024.8160] [ 1170] [depth= 4] . ( 48 sec) [ -9012.2793] [ 1170] [depth= 13] . ( 49 sec) [ -9011.7730] [ 1170] [depth= 3] . ( 49 sec) [ -9011.7299] [ 1170] [depth= 3] . ( 49 sec) [ -8993.8918] [ 1170] [depth= 4] . ( 49 sec) [ -8871.3181] [ 1170] [depth= 35] . ( 49 sec) [ -8871.3069] [ 1170] [depth= 1] . ( 49 sec) [ -8864.1229] [ 1159] [depth= 4] . ( 49 sec) [ -8826.2287] [ 1159] [depth= 12] . ( 49 sec) [ -8569.7833] [ 1138] [depth= 1] . ( 50 sec) [ -8527.4887] [ 1129] [depth= 21] . ( 50 sec) [ -8510.0395] [ 1127] [depth= 21] . ( 50 sec) [ -8507.8032] [ 1127] [depth= 1] . ( 50 sec) [ -8503.2206] [ 1127] [depth= 25] . ( 50 sec) [ -8503.0532] [ 1127] [depth= 24] . ( 50 sec) [ -8502.0763] [ 1127] [depth= 3] . ( 50 sec) [ -8423.5719] [ 1116] [depth= 24] . ( 51 sec) [ -8422.3670] [ 1116] [depth= 6] . ( 51 sec) [ -8421.4520] [ 1116] [depth= 2] . ( 51 sec) [ -8374.1175] [ 1109] [depth= 13] . ( 51 sec) [ -8361.1033] [ 1104] [depth= 12] . ( 51 sec) [ -8098.6712] [ 1104] [depth= 1] . ( 51 sec) [ -8045.7245] [ 1091] [depth= 3] . ( 51 sec) [ -8016.5279] [ 1091] [depth= 9] . ( 51 sec) [ -8008.9317] [ 1090] [depth= 3] . ( 52 sec) [ -7998.8759] [ 1090] [depth= 22] . ( 52 sec) [ -7873.0564] [ 1052] [depth= 6] . ( 52 sec) [ -7726.2149] [ 1034] [depth= 22] . ( 52 sec) [ -7713.9129] [ 1034] [depth= 20] . ( 52 sec) [ -7713.8716] [ 1034] [depth= 15] . ( 52 sec) [ -7713.7383] [ 1034] [depth= 4] . ( 52 sec) [ -7711.7854] [ 1034] [depth= 16] . ( 53 sec) [ -7711.7269] [ 1034] [depth= 4] . ( 53 sec) [ -7711.7122] [ 1034] [depth= 1] . ( 53 sec) [ -7693.0108] [ 1034] [depth= 15] . ( 53 sec) [ -7640.0871] [ 1027] [depth= 21] . ( 53 sec) [ -7587.1218] [ 1027] [depth= 3] . ( 53 sec) [ -7586.2270] [ 1027] [depth= 3] . ( 53 sec) [ -7583.6689] [ 1027] [depth= 2] . ( 53 sec) [ -7582.9758] [ 1027] [depth= 1] . ( 54 sec) [ -7578.2161] [ 1027] [depth= 1] . ( 54 sec) [ -7572.4816] [ 1027] [depth= 3] . ( 54 sec) [ -7568.3688] [ 1027] [depth= 1] . ( 54 sec) [ -7566.5615] [ 1027] [depth= 3] . ( 54 sec) [ -7520.2596] [ 1027] [depth= 32] . ( 54 sec) [ -7469.6899] [ 1015] [depth= 1] . ( 54 sec) [ -7452.7227] [ 1013] [depth= 24] . ( 54 sec) [ -7449.1240] [ 1013] [depth= 28] . ( 54 sec) [ -7369.2329] [ 1005] [depth= 1] . ( 55 sec) [ -7356.2252] [ 1005] [depth= 1] . ( 55 sec) [ -7343.2543] [ 1005] [depth= 39] . ( 55 sec) [ -7341.5401] [ 1005] [depth= 26] . ( 55 sec) [ -7341.5023] [ 1005] [depth= 1] . ( 55 sec) [ -7341.2575] [ 1005] [depth= 14] . ( 55 sec) [ -7335.2251] [ 1005] [depth= 30] . ( 55 sec) [ -7330.1427] [ 1005] [depth= 1] . ( 56 sec) [ -7240.5044] [ 983] [depth= 12] . ( 56 sec) [ -7192.3148] [ 982] [depth= 5] . ( 56 sec) [ -7187.4469] [ 982] [depth= 3] . ( 56 sec) [ -7163.8498] [ 986] [depth= 21] . ( 56 sec) [ -7163.7885] [ 986] [depth= 4] . ( 56 sec) [ -7159.6659] [ 983] [depth= 29] . ( 56 sec) [ -7156.7012] [ 983] [depth= 25] . ( 56 sec) [ -7130.6095] [ 979] [depth= 31] . ( 57 sec) [ -7130.3537] [ 979] [depth= 1] . ( 57 sec) [ -7130.3326] [ 979] [depth= 38] . ( 57 sec) [ -7120.0206] [ 979] [depth= 3] . ( 57 sec) [ -7119.9730] [ 979] [depth= 4] . ( 57 sec) [ -7118.0458] [ 979] [depth= 7] . ( 57 sec) [ -7117.4243] [ 977] [depth= 33] . ( 57 sec) [ -7105.7843] [ 977] [depth= 7] . ( 58 sec) [ -7101.5835] [ 977] [depth= 27] . ( 58 sec) [ -7100.7412] [ 977] [depth= 5] . ( 58 sec) [ -7093.5798] [ 977] [depth= 21] . ( 58 sec) [ -7087.1327] [ 976] [depth= 4] . ( 58 sec) [ -7082.3450] [ 976] [depth= 30] . ( 58 sec) [ -7081.7804] [ 976] [depth= 3] . ( 58 sec) [ -7077.6431] [ 976] [depth= 2] . ( 59 sec) [ -7024.6783] [ 969] [depth= 14] . ( 59 sec) [ -7024.0924] [ 969] [depth= 1] . ( 59 sec) [ -7021.9812] [ 969] [depth= 4] . ( 59 sec) [ -6995.1939] [ 969] [depth= 6] . ( 59 sec) [ -6934.9698] [ 952] [depth= 37] . ( 59 sec) [ -6929.5320] [ 952] [depth= 1] . ( 59 sec) [ -6275.1853] [ 952] [depth= 4] . ( 59 sec) [ -6269.5253] [ 952] [depth= 1] . ( 60 sec) [ -6236.9538] [ 947] [depth= 19] . ( 60 sec) [ -6213.4788] [ 936] [depth= 37] . ( 60 sec) [ -6213.4684] [ 936] [depth= 21] . ( 60 sec) [ -6110.5854] [ 904] [depth= 6] . ( 60 sec) [ -6039.0868] [ 893] [depth= 26] . ( 60 sec) [ -6035.8161] [ 893] [depth= 2] . ( 60 sec) [ -6035.7513] [ 893] [depth= 2] . ( 60 sec) [ -6033.8882] [ 893] [depth= 1] . ( 61 sec) [ -6026.1139] [ 893] [depth= 30] . ( 61 sec) [ -6025.8027] [ 893] [depth= 4] . ( 61 sec) [ -6025.7888] [ 893] [depth= 4] . ( 61 sec) [ -6025.6688] [ 893] [depth= 1] . ( 61 sec) [ -6024.3481] [ 893] [depth= 2] . ( 62 sec) [ -6016.6709] [ 892] [depth= 22] . ( 62 sec) [ -6016.6570] [ 892] [depth= 3] . ( 62 sec) [ -6016.1876] [ 892] [depth= 1] . ( 62 sec) [ -6016.1750] [ 892] [depth= 2] . ( 62 sec) [ -6013.0934] [ 892] [depth= 1] . ( 62 sec) [ -6011.9041] [ 892] [depth= 37] . ( 62 sec) [ -5945.1893] [ 870] [depth= 37] . ( 62 sec) [ -5941.1434] [ 870] [depth= 1] . ( 63 sec) [ -5913.5465] [ 866] [depth= 34] . ( 63 sec) [ -5913.0676] [ 865] [depth= 33] . ( 63 sec) [ -5911.6520] [ 865] [depth= 2] . ( 63 sec) [ -5911.5255] [ 865] [depth= 19] . ( 63 sec) [ -5910.9525] [ 865] [depth= 35] . ( 65 sec) [ -5892.5262] [ 865] [depth= 1] . ( 65 sec) [ -5891.1290] [ 866] [depth= 2] . ( 65 sec) [ -5860.6034] [ 854] [depth= 4] . ( 65 sec) [ -5858.1312] [ 854] [depth= 2] . ( 65 sec) [ -5852.3850] [ 853] [depth= 4] . ( 65 sec) [ -5687.3655] [ 813] [depth= 10] . ( 65 sec) [ -5642.6614] [ 812] [depth= 17] . ( 66 sec) [ -5642.3858] [ 812] [depth= 25] . ( 66 sec) [ -5641.1034] [ 812] [depth= 1] . ( 66 sec) [ -5641.0703] [ 812] [depth= 3] . ( 66 sec) [ -5639.4081] [ 812] [depth= 32] . ( 66 sec) [ -5639.3150] [ 812] [depth= 3] . ( 66 sec) [ -5638.1821] [ 812] [depth= 27] . ( 66 sec) [ -5638.1656] [ 812] [depth= 19] . ( 67 sec) [ -5634.9084] [ 812] [depth= 3] . ( 67 sec) [ -5634.8313] [ 812] [depth= 29] . ( 67 sec) [ -5634.0392] [ 812] [depth= 19] . ( 68 sec) [ -5630.0257] [ 811] [depth= 1] . ( 68 sec) [ -5627.3496] [ 812] [depth= 3] . ( 69 sec) [ -5627.3083] [ 812] [depth= 2] . ( 69 sec) [ -5617.7583] [ 812] [depth= 37] . ( 69 sec) [ -5617.7265] [ 812] [depth= 4] . ( 69 sec) [ -5617.2888] [ 811] [depth= 9] . ( 69 sec) [ -5616.1178] [ 811] [depth= 26] . ( 69 sec) [ -5616.0450] [ 812] [depth= 8] . ( 69 sec) [ -5615.4526] [ 811] [depth= 1] . ( 71 sec) [ -5614.3208] [ 811] [depth= 5] . ( 71 sec) [ -5614.0830] [ 811] [depth= 2] . ( 71 sec) [ -5613.9158] [ 811] [depth= 2] . ( 71 sec) [ -5613.8621] [ 811] [depth= 31] . ( 71 sec) [ -5612.3880] [ 793] [depth= 8] . ( 71 sec) [ -5569.6969] [ 793] [depth= 1] . ( 71 sec) [ -5569.6332] [ 793] [depth= 2] . ( 72 sec) [ -5563.8624] [ 789] [depth= 11] . ( 72 sec) [ -5562.8643] [ 789] [depth= 31] . ( 73 sec) [ -5562.7101] [ 789] [depth= 31] . ( 73 sec) [ -5562.1725] [ 789] [depth= 1] . ( 74 sec) [ -5348.5142] [Branch lengths ] . ( 76 sec) [ -5337.9185] [GTR parameters ] . ( 77 sec) [ -5229.2219] [Alpha ][ 0.250961] . ( 77 sec) [ -5229.1919] [ 789] [depth= 2] . ( 77 sec) [ -5229.1329] [ 789] [depth= 28] . ( 77 sec) [ -5229.0964] [ 789] [depth= 17] . ( 78 sec) [ -5207.1413] [ 777] [depth= 18] . ( 78 sec) [ -5206.3595] [ 777] [depth= 4] . ( 79 sec) [ -5206.3458] [ 777] [depth= 20] . ( 80 sec) [ -5203.5414] [ 775] [depth= 6] . ( 80 sec) [ -5198.5201] [ 775] [depth= 3] . ( 80 sec) [ -5125.5346] [ 746] [depth= 1] . ( 81 sec) [ -5122.5880] [ 742] [depth= 2] . ( 81 sec) [ -4992.0447] [ 709] [depth= 4] . ( 81 sec) [ -4991.5406] [ 706] [depth= 23] . ( 81 sec) [ -4980.2195] [ 704] [depth= 1] . ( 82 sec) [ -4978.8187] [ 704] [depth= 21] . ( 82 sec) [ -4978.8034] [ 704] [depth= 19] . ( 83 sec) [ -4974.7863] [ 704] [depth= 27] . ( 83 sec) [ -4974.7685] [ 704] [depth= 5] . ( 84 sec) [ -4974.7400] [ 704] [depth= 11] . ( 84 sec) [ -4972.9280] [ 702] [depth= 11] . ( 85 sec) [ -4926.1238] [ 691] [depth= 13] . ( 87 sec) [ -4904.1867] [ 690] [depth= 17] . ( 87 sec) [ -4904.1115] [ 690] [depth= 1] . ( 89 sec) [ -4904.0896] [ 686] [depth= 7] . ( 89 sec) [ -4881.0833] [ 686] [depth= 18] . ( 89 sec) [ -4874.1009] [ 685] [depth= 22] . ( 90 sec) [ -4874.0545] [ 685] [depth= 3] . ( 90 sec) [ -4873.3752] [ 685] [depth= 7] . ( 90 sec) [ -4871.0274] [ 685] [depth= 7] . ( 91 sec) [ -4870.9500] [ 685] [depth= 16] . ( 91 sec) [ -4870.2556] [ 685] [depth= 25] . ( 91 sec) [ -4870.0482] [ 685] [depth= 3] . ( 93 sec) [ -4870.0333] [ 685] [depth= 1] . ( 93 sec) [ -4863.8871] [ 685] [depth= 4] . ( 93 sec) [ -4863.8656] [ 685] [depth= 1] . ( 96 sec) [ -4863.7165] [ 685] [depth= 30] . ( 97 sec) [ -4863.5736] [ 685] [depth= 1] . ( 97 sec) [ -4863.5556] [ 685] [depth= 7] . ( 98 sec) [ -4856.5671] [ 684] [depth= 31] . ( 98 sec) [ -4856.4003] [ 684] [depth= 2] . ( 98 sec) [ -4856.2759] [ 684] [depth= 4] . ( 99 sec) [ -4856.0893] [ 684] [depth= 23] . ( 99 sec) [ -4843.4798] [ 682] [depth= 32] . ( 99 sec) [ -4842.6741] [ 682] [depth= 12] . ( 100 sec) [ -4842.6367] [ 682] [depth= 2] . ( 104 sec) [ -4826.2686] [ 680] [depth= 8] . ( 104 sec) [ -4777.8873] [ 666] [depth= 7] . ( 106 sec) [ -4777.5219] [ 666] [depth= 9] . ( 106 sec) [ -4777.4233] [ 666] [depth= 8] . ( 106 sec) [ -4777.3905] [ 666] [depth= 8] . ( 106 sec) [ -4773.3043] [ 666] [depth= 8] . ( 110 sec) [ -4773.0218] [ 666] [depth= 2] . ( 110 sec) [ -4762.0629] [ 668] [depth= 1] . ( 110 sec) [ -4761.9455] [ 667] [depth= 1] . ( 113 sec) [ -4761.5560] [ 667] [depth= 12] . ( 119 sec) [ -4758.9662] [ 667] [depth= 2] . ( 120 sec) [ -4758.5114] [ 667] [depth= 12] . ( 120 sec) [ -4758.4860] [ 667] [depth= 2] . ( 121 sec) [ -4757.8635] [ 667] [depth= 13] . ( 121 sec) [ -4757.8104] [ 667] [depth= 1] . ( 121 sec) [ -4757.7975] [ 667] [depth= 1] . ( 123 sec) [ -4757.7615] [ 667] [depth= 6] . ( 123 sec) [ -4719.1017] [ 654] [depth= 19] . ( 123 sec) [ -4713.2324] [ 656] [depth= 3] . ( 123 sec) [ -4705.3166] [ 644] [depth= 21] . ( 124 sec) [ -4704.4782] [ 640] [depth= 12] . ( 124 sec) [ -4703.8030] [ 640] [depth= 9] . ( 125 sec) [ -4637.0032] [ 627] [depth= 7] . ( 125 sec) [ -4629.5904] [ 626] [depth= 13] . ( 125 sec) [ -4619.5356] [ 626] [depth= 2] . ( 126 sec) [ -4619.3644] [ 626] [depth= 1] . ( 126 sec) [ -4619.3458] [ 626] [depth= 4] . ( 126 sec) [ -4619.2092] [ 626] [depth= 1] . ( 126 sec) [ -4619.1948] [ 626] [depth= 1] . ( 128 sec) [ -4619.1605] [ 626] [depth= 10] . ( 128 sec) [ -4619.1418] [ 626] [depth= 5] . ( 129 sec) [ -4618.8248] [ 626] [depth= 42] . ( 129 sec) [ -4618.8111] [ 626] [depth= 5] . ( 129 sec) [ -4606.6987] [ 624] [depth= 9] . ( 129 sec) [ -4606.3796] [ 624] [depth= 2] . ( 129 sec) [ -4582.6782] [ 624] [depth= 22] . ( 129 sec) [ -4582.6176] [ 624] [depth= 2] . ( 130 sec) [ -4582.1287] [ 624] [depth= 10] . ( 130 sec) [ -4582.0196] [ 624] [depth= 20] . ( 130 sec) [ -4581.9878] [ 624] [depth= 45] . ( 131 sec) [ -4581.9561] [ 624] [depth= 43] . ( 131 sec) [ -4581.9170] [ 624] [depth= 3] . ( 131 sec) [ -4579.7521] [ 624] [depth= 3] . ( 131 sec) [ -4579.7093] [ 624] [depth= 28] . ( 133 sec) [ -4579.6384] [ 624] [depth= 5] . ( 134 sec) [ -4579.6249] [ 624] [depth= 29] . ( 137 sec) [ -4579.6101] [ 624] [depth= 1] . ( 137 sec) [ -4579.5564] [ 624] [depth= 3] . ( 139 sec) [ -4579.5374] [ 624] [depth= 2] . ( 140 sec) [ -4579.5224] [ 624] [depth= 5] . ( 140 sec) [ -4574.3463] [ 623] [depth= 12] . ( 141 sec) [ -4574.2822] [ 623] [depth= 3] . ( 141 sec) [ -4573.0748] [ 623] [depth= 1] . ( 141 sec) [ -4573.0061] [ 623] [depth= 1] . ( 141 sec) [ -4572.9079] [ 623] [depth= 2] . ( 142 sec) [ -4572.1918] [ 623] [depth= 1] . ( 142 sec) [ -4523.3403] [ 614] [depth= 8] . ( 143 sec) [ -4523.2449] [ 614] [depth= 8] . ( 143 sec) [ -4476.6849] [ 595] [depth= 12] . ( 143 sec) [ -4476.5233] [ 595] [depth= 4] . ( 144 sec) [ -4408.4458] [ 574] [depth= 12] . ( 144 sec) [ -4403.7116] [ 575] [depth= 9] . ( 145 sec) [ -4403.6759] [ 575] [depth= 1] . ( 146 sec) [ -4403.5544] [ 575] [depth= 19] . ( 146 sec) [ -4403.5441] [ 575] [depth= 6] . ( 146 sec) [ -4396.4479] [ 574] [depth= 12] . ( 147 sec) [ -4396.4170] [ 574] [depth= 1] . ( 147 sec) [ -4395.6696] [ 574] [depth= 32] . ( 148 sec) [ -4383.6437] [ 572] [depth= 1] . ( 148 sec) [ -4383.4174] [ 572] [depth= 9] . ( 148 sec) [ -4383.1967] [ 572] [depth= 1] . ( 148 sec) [ -4383.0917] [ 572] [depth= 3] . ( 149 sec) [ -4367.4462] [ 571] [depth= 15] . ( 150 sec) [ -4367.1045] [ 571] [depth= 4] . ( 150 sec) [ -4367.0216] [ 571] [depth= 2] . ( 150 sec) [ -4365.1129] [ 571] [depth= 2] . ( 153 sec) [ -4363.7699] [ 571] [depth= 8] . ( 153 sec) [ -4363.3978] [ 571] [depth= 1] . ( 154 sec) [ -4363.3764] [ 571] [depth= 26] . ( 156 sec) [ -4363.3621] [ 571] [depth= 8] . ( 157 sec) [ -4362.6707] [ 572] [depth= 1] . ( 158 sec) [ -4361.6285] [ 574] [depth= 2] . ( 158 sec) [ -4355.9760] [ 570] [depth= 1] . ( 158 sec) [ -4351.6962] [ 569] [depth= 1] . ( 158 sec) [ -4303.6850] [ 558] [depth= 13] . ( 159 sec) [ -4301.7924] [ 559] [depth= 10] . ( 159 sec) [ -4301.7274] [ 559] [depth= 3] . ( 160 sec) [ -4300.3287] [ 559] [depth= 2] . ( 161 sec) [ -4300.3125] [ 559] [depth= 3] . ( 163 sec) [ -4300.1703] [ 559] [depth= 1] . ( 164 sec) [ -4300.1453] [ 559] [depth= 10] . ( 164 sec) [ -4300.1341] [ 559] [depth= 3] . ( 164 sec) [ -4300.1073] [ 559] [depth= 8] . ( 165 sec) [ -4299.8010] [ 559] [depth= 1] . ( 166 sec) [ -4299.7520] [ 559] [depth= 1] . ( 167 sec) [ -4299.7317] [ 559] [depth= 1] . ( 167 sec) [ -4203.7247] [ 531] [depth= 28] . ( 167 sec) [ -4202.1655] [ 531] [depth= 1] . ( 167 sec) [ -4202.1216] [ 531] [depth= 1] . ( 168 sec) [ -4202.0996] [ 531] [depth= 5] . ( 168 sec) [ -4182.8689] [ 527] [depth= 18] . ( 169 sec) [ -4180.4416] [ 527] [depth= 17] . ( 169 sec) [ -4180.4220] [ 527] [depth= 2] . ( 170 sec) [ -4180.4049] [ 527] [depth= 6] . ( 172 sec) [ -4180.3946] [ 527] [depth= 2] . ( 172 sec) [ -4175.1022] [ 527] [depth= 34] . ( 173 sec) [ -4174.5579] [ 527] [depth= 32] . ( 174 sec) [ -4174.5416] [ 527] [depth= 3] . ( 174 sec) [ -4174.5117] [ 527] [depth= 5] . ( 174 sec) [ -4173.3737] [ 527] [depth= 2] . ( 174 sec) [ -4173.3464] [ 527] [depth= 3] . ( 175 sec) [ -4173.2884] [ 527] [depth= 34] . ( 175 sec) [ -4173.2591] [ 527] [depth= 1] . ( 175 sec) [ -4173.2403] [ 527] [depth= 1] . ( 176 sec) [ -4173.0916] [ 527] [depth= 3] . ( 176 sec) [ -4173.0628] [ 527] [depth= 1] . ( 177 sec) [ -4173.0342] [ 527] [depth= 3] . ( 178 sec) [ -4173.0070] [ 527] [depth= 3] . ( 178 sec) [ -4172.9830] [ 527] [depth= 33] . ( 178 sec) [ -4154.6738] [ 527] [depth= 36] . ( 179 sec) [ -4154.4748] [ 527] [depth= 1] . ( 180 sec) [ -4154.4190] [ 527] [depth= 32] . ( 180 sec) [ -4154.3223] [ 527] [depth= 4] . ( 181 sec) [ -4154.3061] [ 527] [depth= 35] . ( 182 sec) [ -4154.2007] [ 527] [depth= 3] . ( 182 sec) [ -4153.6540] [ 527] [depth= 34] . ( 184 sec) [ -4153.5981] [ 527] [depth= 34] . ( 184 sec) [ -4153.3025] [ 527] [depth= 22] . ( 184 sec) [ -4153.1865] [ 527] [depth= 4] . ( 184 sec) [ -4153.1740] [ 527] [depth= 2] . ( 184 sec) [ -4153.1619] [ 527] [depth= 1] . ( 184 sec) [ -4152.6578] [ 527] [depth= 3] . ( 185 sec) [ -4152.6221] [ 527] [depth= 1] . ( 186 sec) [ -4152.4014] [ 527] [depth= 3] . ( 186 sec) [ -4152.3831] [ 527] [depth= 4] . ( 186 sec) [ -4152.3558] [ 527] [depth= 1] . ( 186 sec) [ -4152.2234] [ 527] [depth= 5] . ( 186 sec) [ -4152.2106] [ 527] [depth= 12] . ( 186 sec) [ -4123.4162] [ 517] [depth= 4] . ( 186 sec) [ -4121.8551] [ 518] [depth= 1] . ( 187 sec) [ -4121.6683] [ 518] [depth= 1] . ( 187 sec) [ -4121.6439] [ 518] [depth= 5] . ( 187 sec) [ -4121.6165] [ 518] [depth= 6] . ( 188 sec) [ -4121.5775] [ 518] [depth= 3] . ( 189 sec) [ -4121.4932] [ 518] [depth= 4] . ( 189 sec) [ -4121.4447] [ 518] [depth= 1] . ( 191 sec) [ -4121.3934] [ 518] [depth= 3] . ( 191 sec) [ -4121.1833] [ 518] [depth= 1] . ( 191 sec) [ -4121.1665] [ 518] [depth= 3] . ( 191 sec) [ -4121.1492] [ 518] [depth= 39] . ( 192 sec) [ -4121.1363] [ 518] [depth= 2] . ( 192 sec) [ -4121.0632] [ 518] [depth= 2] . ( 192 sec) [ -4121.0462] [ 518] [depth= 29] . ( 194 sec) [ -4120.9443] [ 518] [depth= 3] . ( 194 sec) [ -4120.7324] [ 518] [depth= 2] . ( 194 sec) [ -4120.1440] [ 517] [depth= 3] . ( 194 sec) [ -4114.3122] [ 516] [depth= 8] . ( 195 sec) [ -4114.2991] [ 516] [depth= 26] . ( 195 sec) [ -4114.2628] [ 516] [depth= 4] . ( 195 sec) [ -4108.2039] [ 515] [depth= 10] . ( 197 sec) [ -3991.1022] [ 480] [depth= 16] . ( 197 sec) [ -3990.9629] [ 480] [depth= 11] . ( 198 sec) [ -3990.9482] [ 480] [depth= 4] . ( 198 sec) [ -3990.9243] [ 480] [depth= 4] . ( 198 sec) [ -3990.9117] [ 480] [depth= 1] . ( 198 sec) [ -3990.8978] [ 480] [depth= 2] . ( 198 sec) [ -3987.5756] [ 478] [depth= 4] . ( 198 sec) [ -3986.8618] [ 480] [depth= 1] . ( 199 sec) [ -3986.8487] [ 480] [depth= 29] . ( 199 sec) [ -3976.4210] [ 476] [depth= 3] . ( 200 sec) [ -3976.3687] [ 476] [depth= 23] . ( 200 sec) [ -3976.3552] [ 476] [depth= 2] . ( 201 sec) [ -3976.3434] [ 476] [depth= 4] . ( 201 sec) [ -3952.1323] [ 470] [depth= 20] . ( 201 sec) [ -3951.0812] [ 470] [depth= 2] . ( 201 sec) [ -3951.0502] [ 470] [depth= 6] . ( 201 sec) [ -3951.0265] [ 470] [depth= 2] . ( 201 sec) [ -3950.9738] [ 470] [depth= 4] . ( 201 sec) [ -3950.4895] [ 470] [depth= 5] . ( 203 sec) [ -3950.4724] [ 470] [depth= 4] . ( 203 sec) [ -3950.3667] [ 470] [depth= 1] . ( 204 sec) [ -3950.0473] [ 470] [depth= 4] . ( 205 sec) [ -3950.0347] [ 470] [depth= 1] . ( 207 sec) [ -3949.7820] [ 470] [depth= 8] . ( 207 sec) [ -3949.7667] [ 470] [depth= 4] . ( 207 sec) [ -3949.7557] [ 470] [depth= 12] . ( 207 sec) [ -3949.7454] [ 470] [depth= 5] . ( 207 sec) [ -3949.5865] [ 470] [depth= 3] . ( 208 sec) [ -3949.4028] [ 470] [depth= 3] . ( 208 sec) [ -3949.3917] [ 470] [depth= 4] . ( 208 sec) [ -3928.7626] [ 466] [depth= 35] . ( 209 sec) [ -3928.7507] [ 466] [depth= 3] . ( 209 sec) [ -3928.5462] [ 466] [depth= 2] . ( 209 sec) [ -3928.4011] [ 466] [depth= 4] . ( 210 sec) [ -3923.9181] [ 462] [depth= 1] . ( 210 sec) [ -3923.8389] [ 462] [depth= 1] . ( 210 sec) [ -3921.5760] [ 461] [depth= 1] . ( 211 sec) [ -3921.4980] [ 461] [depth= 1] . ( 212 sec) [ -3910.6820] [ 457] [depth= 16] . ( 212 sec) [ -3910.6705] [ 457] [depth= 4] . ( 212 sec) [ -3910.3818] [ 457] [depth= 4] . ( 213 sec) [ -3910.3569] [ 457] [depth= 2] . ( 213 sec) [ -3881.1881] [ 448] [depth= 3] . ( 213 sec) [ -3863.2422] [ 441] [depth= 3] . ( 215 sec) [ -3863.2154] [ 441] [depth= 5] . ( 215 sec) [ -3863.2042] [ 441] [depth= 3] . ( 215 sec) [ -3863.1934] [ 441] [depth= 1] . ( 215 sec) [ -3863.1704] [ 441] [depth= 4] . ( 216 sec) [ -3862.5698] [ 441] [depth= 5] . ( 216 sec) [ -3862.5398] [ 441] [depth= 6] . ( 217 sec) [ -3862.1484] [ 441] [depth= 2] . ( 219 sec) [ -3862.0625] [ 441] [depth= 5] . ( 222 sec) [ -3862.0495] [ 441] [depth= 1] . ( 223 sec) [ -3862.0379] [ 441] [depth= 2] . ( 223 sec) [ -3851.8688] [ 439] [depth= 1] . ( 223 sec) [ -3851.8566] [ 439] [depth= 4] . ( 223 sec) [ -3851.7902] [ 439] [depth= 5] . ( 224 sec) [ -3851.7666] [ 439] [depth= 10] . ( 225 sec) [ -3823.3747] [Branch lengths ] . ( 227 sec) [ -3821.0452] [GTR parameters ] . ( 227 sec) [ -3818.2693] [Alpha ][ 0.326056] . ( 227 sec) [ -3818.2130] [ 439] [depth= 5] . ( 227 sec) [ -3817.9097] [ 439] [depth= 5] . ( 227 sec) [ -3797.7795] [ 433] [depth= 6] . ( 228 sec) [ -3797.7486] [ 433] [depth= 1] . ( 230 sec) [ -3793.0547] [ 432] [depth= 2] . ( 230 sec) [ -3792.5102] [ 434] [depth= 1] . ( 233 sec) [ -3792.4974] [ 434] [depth= 5] . ( 233 sec) [ -3792.1618] [ 434] [depth= 8] . ( 241 sec) [ -3792.1364] [ 435] [depth= 13] . ( 241 sec) [ -3692.0749] [ 413] [depth= 11] . ( 241 sec) [ -3688.5870] [ 413] [depth= 2] . ( 241 sec) [ -3688.4528] [ 413] [depth= 8] . ( 242 sec) [ -3688.4394] [ 413] [depth= 1] . ( 244 sec) [ -3688.3989] [ 413] [depth= 1] . ( 244 sec) [ -3688.3788] [ 413] [depth= 7] . ( 249 sec) [ -3688.3509] [ 413] [depth= 18] . ( 252 sec) [ -3688.3403] [ 413] [depth= 4] . ( 255 sec) [ -3686.1124] [ 412] [depth= 2] . ( 255 sec) [ -3638.2446] [ 399] [depth= 5] . ( 255 sec) [ -3638.0657] [ 399] [depth= 4] . ( 264 sec) [ -3638.0108] [ 399] [depth= 3] . ( 267 sec) [ -3621.8090] [ 393] [depth= 2] . ( 267 sec) [ -3621.5119] [ 392] [depth= 2] . ( 267 sec) [ -3621.3330] [ 392] [depth= 12] . ( 271 sec) [ -3621.3203] [ 392] [depth= 4] . ( 275 sec) [ -3620.9716] [ 393] [depth= 1] . ( 282 sec) [ -3620.9048] [ 393] [depth= 2] . ( 282 sec) [ -3619.9762] [ 393] [depth= 2] . ( 287 sec) [ -3619.9224] [ 393] [depth= 4] . ( 294 sec) [ -3619.8049] [ 393] [depth= 7] . ( 303 sec) [ -3619.7387] [ 393] [depth= 1] . ( 303 sec) [ -3619.7225] [ 393] [depth= 2] . ( 305 sec) [ -3615.4530] [ 392] [depth= 3] . ( 306 sec) [ -3615.4418] [ 392] [depth= 3] . ( 307 sec) [ -3615.3773] [ 392] [depth= 6] . ( 309 sec) [ -3615.2451] [ 392] [depth= 2] . ( 309 sec) [ -3612.4455] [ 391] [depth= 1] . ( 314 sec) [ -3612.3861] [ 391] [depth= 4] . ( 316 sec) [ -3612.3136] [ 391] [depth= 2] . ( 322 sec) [ -3611.9615] [ 391] [depth= 3] . ( 326 sec) [ -3611.9393] [ 391] [depth= 3] . ( 328 sec) [ -3611.9285] [ 391] [depth= 1] . ( 331 sec) [ -3611.6986] [ 390] [depth= 1] . ( 333 sec) [ -3611.6868] [ 390] [depth= 3] . ( 334 sec) [ -3611.6575] [ 390] [depth= 1] . ( 341 sec) [ -3609.1442] [ 389] [depth= 4] . ( 342 sec) [ -3609.1269] [ 389] [depth= 3] . ( 343 sec) [ -3608.7377] [ 390] [depth= 2] . ( 345 sec) [ -3587.7789] [ 385] [depth= 2] . ( 345 sec) [ -3586.2386] [ 385] [depth= 6] . ( 351 sec) [ -3556.3400] [ 380] [depth= 1] . ( 352 sec) [ -3549.4290] [ 380] [depth= 9] . ( 354 sec) [ -3549.2012] [ 380] [depth= 3] . ( 357 sec) [ -3548.6967] [ 380] [depth= 9] . ( 366 sec) [ -3548.6571] [ 380] [depth= 3] . ( 367 sec) [ -3548.6449] [ 380] [depth= 1] . ( 368 sec) [ -3548.6331] [ 380] [depth= 5] . ( 368 sec) [ -3548.6222] [ 380] [depth= 1] . ( 368 sec) [ -3548.6112] [ 380] [depth= 7] . ( 368 sec) [ -3548.6000] [ 380] [depth= 5] . ( 370 sec) [ -3548.2305] [ 380] [depth= 1] . ( 370 sec) [ -3548.1889] [ 380] [depth= 9] . ( 372 sec) [ -3547.6438] [ 380] [depth= 3] . ( 372 sec) [ -3547.6322] [ 380] [depth= 4] . ( 373 sec) [ -3547.6210] [ 380] [depth= 1] . ( 374 sec) [ -3547.1933] [ 380] [depth= 4] . ( 374 sec) [ -3531.1462] [ 374] [depth= 2] . ( 374 sec) [ -3524.2343] [ 372] [depth= 6] . ( 379 sec) [ -3524.1935] [ 372] [depth= 2] . ( 380 sec) [ -3524.0932] [ 372] [depth= 2] . ( 383 sec) [ -3524.0440] [ 372] [depth= 3] . ( 384 sec) [ -3524.0062] [ 372] [depth= 5] . ( 384 sec) [ -3523.9577] [ 372] [depth= 4] . ( 385 sec) [ -3523.9297] [ 372] [depth= 3] . ( 387 sec) [ -3523.9196] [ 372] [depth= 9] . ( 391 sec) [ -3523.8760] [ 372] [depth= 4] . ( 394 sec) [ -3523.8646] [ 372] [depth= 5] . ( 402 sec) [ -3523.7094] [ 372] [depth= 5] . ( 405 sec) [ -3523.6835] [ 372] [depth= 1] . ( 408 sec) [ -3523.6711] [ 372] [depth= 2] . ( 427 sec) [ -3520.8830] [Branch lengths ] . ( 428 sec) [ -3520.5070] [GTR parameters ] . ( 429 sec) [ -3515.9428] [Alpha ][ 0.542566] . ( 429 sec) [ -3508.7335] [ 371] [depth= 5] . ( 430 sec) [ -3508.6167] [ 371] [depth= 3] . ( 436 sec) [ -3508.5586] [ 371] [depth= 5] . ( 448 sec) [ -3508.5425] [ 371] [depth= 2] . ( 471 sec) [ -3508.3798] [ 367] [depth= 1] . ( 615 sec) [ -3508.3678] [ 367] [depth= 1] . ( 652 sec) [ -3508.1879] [Branch lengths ] . ( 653 sec) [ -3508.1351] [GTR parameters ] . ( 653 sec) [ -3508.1010] [Alpha ][ 0.569597] . ( 881 sec) [ -3508.0855] [Branch lengths ] . ( 1002 sec) [ -3508.0848] [Branch lengths ] . ( 1002 sec) [ -3508.0848] [Topology ] . ( 1004 sec) [ -3508.0848] [Topology ] . ( 1004 sec) [ -3508.0842] [GTR parameters ] . ( 1005 sec) [ -3508.0838] [Alpha ][ 0.572838] . ( 1005 sec) [ -3508.0838] [Topology ] . ( 1007 sec) [ -3508.0837] [Topology ] . ( 1007 sec) [ -3508.0837] [GTR parameters ] . ( 1008 sec) [ -3508.0837] [Alpha ][ 0.572838] . Checking for NNIs, optimizing five branches... . Log likelihood of the current tree: -3508.083708. . [Random start 3/ 5] . Computing pairwise distances... . Building BioNJ tree... . Randomising the tree... . Maximizing likelihood (using SPR moves)... . ( 3 sec) [ -54712.6337] [GTR parameters ] . ( 3 sec) [ -54057.2300] [Alpha ][ 0.500960] . ( 4 sec) [ -53012.3475] [ 3190] [depth= 12] . ( 4 sec) [ -52813.0892] [ 3172] [depth= 9] . ( 4 sec) [ -52593.3058] [ 3160] [depth= 1] . ( 4 sec) [ -52508.8401] [ 3156] [depth= 1] . ( 4 sec) [ -52222.5883] [ 3143] [depth= 3] . ( 4 sec) [ -51790.1144] [ 3131] [depth= 2] . ( 4 sec) [ -51559.1883] [ 3131] [depth= 1] . ( 4 sec) [ -51328.6896] [ 3130] [depth= 4] . ( 4 sec) [ -51105.6310] [ 3128] [depth= 7] . ( 5 sec) [ -51041.8866] [ 3115] [depth= 9] . ( 5 sec) [ -50598.6490] [ 3115] [depth= 6] . ( 5 sec) [ -49864.2853] [ 3115] [depth= 2] . ( 5 sec) [ -49079.5745] [ 3113] [depth= 5] . ( 5 sec) [ -48987.4055] [ 3080] [depth= 3] . ( 5 sec) [ -48883.6930] [ 3075] [depth= 8] . ( 5 sec) [ -48849.5683] [ 3073] [depth= 5] . ( 5 sec) [ -48768.9183] [ 3073] [depth= 5] . ( 5 sec) [ -48394.4702] [ 3066] [depth= 14] . ( 6 sec) [ -48254.9906] [ 3066] [depth= 2] . ( 6 sec) [ -47965.7138] [ 3059] [depth= 6] . ( 6 sec) [ -47331.2694] [ 3059] [depth= 2] . ( 6 sec) [ -46941.9755] [ 3046] [depth= 4] . ( 6 sec) [ -46934.7386] [ 3036] [depth= 3] . ( 6 sec) [ -46908.7294] [ 3019] [depth= 5] . ( 6 sec) [ -46216.9518] [ 3019] [depth= 16] . ( 6 sec) [ -45981.8267] [ 2979] [depth= 9] . ( 7 sec) [ -45944.8616] [ 2979] [depth= 1] . ( 7 sec) [ -45493.3654] [ 2963] [depth= 6] . ( 7 sec) [ -44957.7042] [ 2963] [depth= 7] . ( 7 sec) [ -44555.0460] [ 2947] [depth= 25] . ( 7 sec) [ -43771.2153] [ 2923] [depth= 24] . ( 7 sec) [ -43630.5042] [ 2913] [depth= 9] . ( 7 sec) [ -43553.7588] [ 2913] [depth= 1] . ( 7 sec) [ -43207.9606] [ 2885] [depth= 7] . ( 8 sec) [ -43195.4141] [ 2882] [depth= 3] . ( 8 sec) [ -43144.1583] [ 2882] [depth= 9] . ( 8 sec) [ -42975.0661] [ 2882] [depth= 2] . ( 8 sec) [ -42393.5873] [ 2876] [depth= 14] . ( 8 sec) [ -42066.2748] [ 2873] [depth= 6] . ( 8 sec) [ -42011.4126] [ 2873] [depth= 3] . ( 8 sec) [ -41641.8383] [ 2873] [depth= 1] . ( 8 sec) [ -41147.1604] [ 2872] [depth= 8] . ( 9 sec) [ -40900.3865] [ 2838] [depth= 18] . ( 9 sec) [ -40889.4883] [ 2838] [depth= 7] . ( 9 sec) [ -40547.7306] [ 2834] [depth= 3] . ( 9 sec) [ -40423.9746] [ 2811] [depth= 7] . ( 9 sec) [ -40268.2841] [ 2810] [depth= 3] . ( 9 sec) [ -39932.9122] [ 2796] [depth= 21] . ( 9 sec) [ -39867.5516] [ 2796] [depth= 2] . ( 9 sec) [ -39837.2433] [ 2792] [depth= 10] . ( 10 sec) [ -39823.0654] [ 2792] [depth= 1] . ( 10 sec) [ -39238.1275] [ 2792] [depth= 2] . ( 10 sec) [ -38656.4015] [ 2789] [depth= 18] . ( 10 sec) [ -37952.3488] [ 2776] [depth= 31] . ( 10 sec) [ -37145.6030] [ 2776] [depth= 1] . ( 10 sec) [ -37125.9707] [ 2751] [depth= 31] . ( 10 sec) [ -36068.8451] [ 2751] [depth= 1] . ( 10 sec) [ -34708.0312] [ 2730] [depth= 9] . ( 11 sec) [ -34162.0872] [ 2700] [depth= 12] . ( 11 sec) [ -34007.2895] [ 2699] [depth= 26] . ( 11 sec) [ -33822.0714] [ 2699] [depth= 14] . ( 11 sec) [ -33715.6860] [ 2694] [depth= 1] . ( 11 sec) [ -33653.4715] [ 2690] [depth= 5] . ( 11 sec) [ -33619.7322] [ 2689] [depth= 20] . ( 11 sec) [ -33535.7369] [ 2674] [depth= 9] . ( 11 sec) [ -33468.6840] [ 2670] [depth= 19] . ( 12 sec) [ -33434.4307] [ 2641] [depth= 3] . ( 12 sec) [ -33235.1303] [ 2634] [depth= 26] . ( 12 sec) [ -33124.0292] [ 2621] [depth= 20] . ( 12 sec) [ -32742.2539] [ 2588] [depth= 8] . ( 12 sec) [ -32610.2404] [ 2577] [depth= 22] . ( 12 sec) [ -32541.6559] [ 2575] [depth= 1] . ( 12 sec) [ -31903.5168] [ 2563] [depth= 24] . ( 12 sec) [ -31762.9002] [ 2555] [depth= 21] . ( 13 sec) [ -31735.7752] [ 2555] [depth= 12] . ( 13 sec) [ -31623.5845] [ 2555] [depth= 1] . ( 13 sec) [ -31522.4659] [ 2539] [depth= 6] . ( 13 sec) [ -31439.0013] [ 2537] [depth= 22] . ( 13 sec) [ -31369.5825] [ 2537] [depth= 3] . ( 13 sec) [ -31352.5322] [ 2536] [depth= 5] . ( 13 sec) [ -31003.4919] [ 2536] [depth= 2] . ( 13 sec) [ -30958.4753] [ 2526] [depth= 2] . ( 13 sec) [ -30741.4852] [ 2526] [depth= 4] . ( 14 sec) [ -30627.4184] [ 2524] [depth= 3] . ( 14 sec) [ -30201.3185] [ 2524] [depth= 1] . ( 14 sec) [ -30084.3529] [ 2505] [depth= 5] . ( 14 sec) [ -29548.3824] [ 2504] [depth= 1] . ( 14 sec) [ -29274.4397] [ 2493] [depth= 10] . ( 14 sec) [ -28525.2019] [ 2472] [depth= 3] . ( 14 sec) [ -28428.5824] [ 2443] [depth= 1] . ( 14 sec) [ -28329.4989] [ 2430] [depth= 20] . ( 15 sec) [ -28244.5084] [ 2425] [depth= 9] . ( 15 sec) [ -28236.6926] [ 2427] [depth= 1] . ( 15 sec) [ -28196.7677] [ 2426] [depth= 4] . ( 15 sec) [ -28087.4950] [ 2403] [depth= 31] . ( 15 sec) [ -27869.6971] [ 2386] [depth= 12] . ( 15 sec) [ -27855.9971] [ 2385] [depth= 3] . ( 15 sec) [ -27571.9616] [ 2382] [depth= 5] . ( 15 sec) [ -27506.4966] [ 2366] [depth= 31] . ( 16 sec) [ -27505.6264] [ 2366] [depth= 20] . ( 16 sec) [ -27264.2571] [ 2352] [depth= 25] . ( 16 sec) [ -27251.8224] [ 2348] [depth= 2] . ( 16 sec) [ -27120.8751] [ 2348] [depth= 2] . ( 16 sec) [ -27084.0094] [ 2346] [depth= 5] . ( 16 sec) [ -27067.7026] [ 2338] [depth= 31] . ( 16 sec) [ -27008.6728] [ 2338] [depth= 2] . ( 16 sec) [ -27003.5135] [ 2327] [depth= 1] . ( 17 sec) [ -26965.6686] [ 2325] [depth= 17] . ( 17 sec) [ -26819.3790] [ 2283] [depth= 20] . ( 17 sec) [ -26814.4119] [ 2281] [depth= 3] . ( 17 sec) [ -26692.3539] [ 2281] [depth= 9] . ( 17 sec) [ -26661.0275] [ 2280] [depth= 3] . ( 17 sec) [ -26528.3615] [ 2277] [depth= 1] . ( 17 sec) [ -26508.0029] [ 2272] [depth= 2] . ( 17 sec) [ -26360.3109] [ 2260] [depth= 7] . ( 18 sec) [ -26212.9904] [ 2221] [depth= 13] . ( 18 sec) [ -26139.1309] [ 2221] [depth= 1] . ( 18 sec) [ -25857.4147] [ 2217] [depth= 7] . ( 18 sec) [ -25781.8032] [ 2217] [depth= 1] . ( 18 sec) [ -25663.2335] [ 2207] [depth= 32] . ( 18 sec) [ -25576.2521] [ 2187] [depth= 2] . ( 18 sec) [ -25571.0549] [ 2188] [depth= 1] . ( 18 sec) [ -25263.9913] [ 2187] [depth= 8] . ( 18 sec) [ -25095.0487] [ 2186] [depth= 25] . ( 19 sec) [ -25008.1261] [ 2164] [depth= 10] . ( 19 sec) [ -24876.8714] [ 2164] [depth= 7] . ( 19 sec) [ -24861.6492] [ 2166] [depth= 1] . ( 19 sec) [ -24667.8557] [ 2139] [depth= 6] . ( 19 sec) [ -24663.1896] [ 2139] [depth= 2] . ( 19 sec) [ -24551.5341] [ 2139] [depth= 5] . ( 19 sec) [ -24357.3865] [ 2131] [depth= 8] . ( 19 sec) [ -24347.4518] [ 2133] [depth= 1] . ( 20 sec) [ -24256.5413] [ 2132] [depth= 10] . ( 20 sec) [ -24235.8502] [ 2132] [depth= 2] . ( 20 sec) [ -23709.2441] [ 2132] [depth= 29] . ( 20 sec) [ -23449.4919] [ 2118] [depth= 11] . ( 20 sec) [ -23313.1129] [ 2118] [depth= 1] . ( 20 sec) [ -22780.0217] [ 2099] [depth= 6] . ( 20 sec) [ -22778.9505] [ 2099] [depth= 17] . ( 20 sec) [ -22778.5579] [ 2099] [depth= 27] . ( 21 sec) [ -22656.4114] [ 2063] [depth= 12] . ( 21 sec) [ -22655.4693] [ 2063] [depth= 27] . ( 21 sec) [ -22507.8067] [ 2028] [depth= 15] . ( 21 sec) [ -22063.6595] [ 2009] [depth= 4] . ( 21 sec) [ -22058.8934] [ 2003] [depth= 7] . ( 21 sec) [ -21983.6252] [ 2003] [depth= 3] . ( 21 sec) [ -21981.7577] [ 2003] [depth= 27] . ( 21 sec) [ -21977.4928] [ 2003] [depth= 2] . ( 22 sec) [ -21911.0221] [ 2003] [depth= 1] . ( 22 sec) [ -21654.4003] [ 2003] [depth= 1] . ( 22 sec) [ -21647.7895] [ 2003] [depth= 20] . ( 22 sec) [ -21644.5916] [ 2003] [depth= 22] . ( 22 sec) [ -21619.8516] [ 2000] [depth= 4] . ( 22 sec) [ -21618.2894] [ 2000] [depth= 1] . ( 22 sec) [ -21553.1018] [ 1984] [depth= 5] . ( 22 sec) [ -21551.3305] [ 1984] [depth= 1] . ( 22 sec) [ -21314.8312] [ 1985] [depth= 15] . ( 23 sec) [ -21125.5458] [ 1985] [depth= 24] . ( 23 sec) [ -20998.7631] [ 1985] [depth= 35] . ( 23 sec) [ -20933.0242] [ 1968] [depth= 13] . ( 23 sec) [ -20655.1722] [ 1953] [depth= 15] . ( 23 sec) [ -20653.2510] [ 1953] [depth= 1] . ( 23 sec) [ -20652.4880] [ 1953] [depth= 1] . ( 23 sec) [ -20605.9761] [ 1940] [depth= 18] . ( 23 sec) [ -20401.1555] [ 1931] [depth= 8] . ( 24 sec) [ -20296.4028] [ 1917] [depth= 9] . ( 24 sec) [ -20231.4855] [ 1914] [depth= 3] . ( 24 sec) [ -20231.1668] [ 1914] [depth= 1] . ( 24 sec) [ -20230.9627] [ 1914] [depth= 5] . ( 24 sec) [ -20230.8691] [ 1914] [depth= 6] . ( 24 sec) [ -20097.9520] [ 1887] [depth= 27] . ( 24 sec) [ -20097.8937] [ 1887] [depth= 4] . ( 24 sec) [ -19974.6957] [ 1870] [depth= 5] . ( 25 sec) [ -19955.2850] [ 1870] [depth= 7] . ( 25 sec) [ -19952.1224] [ 1870] [depth= 2] . ( 25 sec) [ -19857.4437] [ 1860] [depth= 25] . ( 25 sec) [ -19854.8772] [ 1860] [depth= 17] . ( 25 sec) [ -19854.6701] [ 1860] [depth= 18] . ( 25 sec) [ -19849.2312] [ 1861] [depth= 1] . ( 25 sec) [ -19849.1057] [ 1861] [depth= 4] . ( 26 sec) [ -19785.5010] [ 1861] [depth= 2] . ( 26 sec) [ -19751.1890] [ 1861] [depth= 10] . ( 26 sec) [ -19460.0712] [ 1861] [depth= 15] . ( 26 sec) [ -19299.6068] [ 1861] [depth= 12] . ( 26 sec) [ -19299.3920] [ 1861] [depth= 3] . ( 26 sec) [ -19299.3725] [ 1861] [depth= 15] . ( 26 sec) [ -19299.3187] [ 1861] [depth= 7] . ( 27 sec) [ -19247.0109] [ 1858] [depth= 14] . ( 27 sec) [ -19244.4650] [ 1858] [depth= 1] . ( 27 sec) [ -19130.5946] [ 1841] [depth= 3] . ( 27 sec) [ -19130.5775] [ 1841] [depth= 6] . ( 27 sec) [ -19106.6376] [ 1839] [depth= 24] . ( 27 sec) [ -19106.1906] [ 1839] [depth= 1] . ( 27 sec) [ -19043.1602] [ 1818] [depth= 1] . ( 27 sec) [ -19015.3339] [ 1801] [depth= 22] . ( 28 sec) [ -19000.1640] [ 1800] [depth= 1] . ( 28 sec) [ -18626.9782] [ 1800] [depth= 1] . ( 28 sec) [ -18555.7964] [ 1797] [depth= 5] . ( 28 sec) [ -18535.5192] [ 1802] [depth= 1] . ( 28 sec) [ -18500.2733] [ 1797] [depth= 7] . ( 28 sec) [ -18417.2947] [ 1777] [depth= 3] . ( 28 sec) [ -18348.6639] [ 1766] [depth= 7] . ( 28 sec) [ -18346.5662] [ 1766] [depth= 1] . ( 28 sec) [ -18336.4654] [ 1766] [depth= 1] . ( 29 sec) [ -18245.4773] [ 1766] [depth= 9] . ( 29 sec) [ -18114.3754] [ 1770] [depth= 1] . ( 29 sec) [ -18097.2673] [ 1766] [depth= 1] . ( 29 sec) [ -18081.2738] [ 1766] [depth= 6] . ( 29 sec) [ -18032.4889] [ 1756] [depth= 9] . ( 29 sec) [ -17965.0248] [ 1753] [depth= 1] . ( 29 sec) [ -17946.6561] [ 1745] [depth= 4] . ( 29 sec) [ -17945.9495] [ 1745] [depth= 12] . ( 30 sec) [ -17578.2532] [ 1741] [depth= 9] . ( 30 sec) [ -17489.3665] [ 1736] [depth= 8] . ( 30 sec) [ -17280.8699] [ 1736] [depth= 4] . ( 30 sec) [ -17261.5770] [ 1733] [depth= 6] . ( 30 sec) [ -17202.8500] [ 1731] [depth= 2] . ( 30 sec) [ -17100.0247] [ 1731] [depth= 1] . ( 30 sec) [ -17003.9276] [ 1716] [depth= 13] . ( 30 sec) [ -16997.7091] [ 1716] [depth= 9] . ( 31 sec) [ -16903.7717] [ 1694] [depth= 3] . ( 31 sec) [ -16819.2205] [ 1694] [depth= 2] . ( 31 sec) [ -16397.8794] [ 1689] [depth= 10] . ( 31 sec) [ -16319.4902] [ 1689] [depth= 2] . ( 31 sec) [ -16163.8672] [ 1645] [depth= 12] . ( 31 sec) [ -16115.6884] [ 1645] [depth= 11] . ( 31 sec) [ -16096.1697] [ 1643] [depth= 1] . ( 32 sec) [ -16089.8562] [ 1643] [depth= 12] . ( 32 sec) [ -16007.7235] [ 1627] [depth= 19] . ( 32 sec) [ -15988.1236] [ 1621] [depth= 31] . ( 32 sec) [ -15519.2178] [ 1621] [depth= 18] . ( 32 sec) [ -15516.3261] [ 1621] [depth= 30] . ( 32 sec) [ -15416.5720] [ 1599] [depth= 1] . ( 32 sec) [ -15012.2767] [ 1595] [depth= 13] . ( 32 sec) [ -14878.0776] [ 1571] [depth= 17] . ( 32 sec) [ -14840.3244] [ 1577] [depth= 3] . ( 33 sec) [ -14687.1498] [ 1569] [depth= 15] . ( 33 sec) [ -14681.5541] [ 1569] [depth= 1] . ( 33 sec) [ -14578.7580] [ 1543] [depth= 17] . ( 33 sec) [ -14578.5105] [ 1543] [depth= 1] . ( 33 sec) [ -14544.3941] [ 1543] [depth= 5] . ( 33 sec) [ -14356.4350] [ 1530] [depth= 20] . ( 33 sec) [ -14356.2201] [ 1530] [depth= 15] . ( 34 sec) [ -14356.1390] [ 1530] [depth= 27] . ( 34 sec) [ -14353.8108] [ 1530] [depth= 4] . ( 34 sec) [ -14330.3993] [ 1526] [depth= 15] . ( 34 sec) [ -14330.3555] [ 1526] [depth= 1] . ( 34 sec) [ -13713.8984] [ 1519] [depth= 14] . ( 34 sec) [ -13713.6360] [ 1519] [depth= 14] . ( 34 sec) [ -13712.6142] [ 1519] [depth= 1] . ( 34 sec) [ -13712.5431] [ 1519] [depth= 1] . ( 34 sec) [ -13712.0590] [ 1519] [depth= 3] . ( 35 sec) [ -13696.9336] [ 1517] [depth= 29] . ( 35 sec) [ -13685.5174] [ 1517] [depth= 15] . ( 35 sec) [ -13413.1729] [ 1497] [depth= 8] . ( 35 sec) [ -13034.8591] [ 1481] [depth= 6] . ( 35 sec) [ -13001.7679] [ 1481] [depth= 1] . ( 35 sec) [ -13001.0926] [ 1481] [depth= 3] . ( 35 sec) [ -12965.5397] [ 1481] [depth= 1] . ( 35 sec) [ -12844.6563] [ 1481] [depth= 4] . ( 36 sec) [ -12626.9886] [ 1481] [depth= 2] . ( 36 sec) [ -12602.2053] [ 1472] [depth= 5] . ( 36 sec) [ -12588.0180] [ 1472] [depth= 1] . ( 36 sec) [ -12583.0028] [ 1472] [depth= 1] . ( 36 sec) [ -12488.1218] [ 1472] [depth= 12] . ( 36 sec) [ -12473.8934] [ 1471] [depth= 4] . ( 36 sec) [ -12471.3225] [ 1471] [depth= 12] . ( 36 sec) [ -12471.3029] [ 1471] [depth= 12] . ( 37 sec) [ -12298.1080] [ 1475] [depth= 7] . ( 37 sec) [ -12298.0471] [ 1475] [depth= 6] . ( 37 sec) [ -12296.5798] [ 1475] [depth= 3] . ( 37 sec) [ -12261.0827] [ 1473] [depth= 12] . ( 37 sec) [ -12183.8614] [ 1455] [depth= 7] . ( 37 sec) [ -11948.2204] [ 1426] [depth= 10] . ( 37 sec) [ -11910.8625] [ 1415] [depth= 14] . ( 37 sec) [ -11757.8131] [ 1415] [depth= 9] . ( 38 sec) [ -11748.2471] [ 1410] [depth= 9] . ( 38 sec) [ -11733.4524] [ 1410] [depth= 7] . ( 38 sec) [ -11732.8053] [ 1410] [depth= 10] . ( 38 sec) [ -11725.4045] [ 1409] [depth= 8] . ( 38 sec) [ -11725.2455] [ 1409] [depth= 10] . ( 38 sec) [ -11633.7052] [ 1384] [depth= 15] . ( 39 sec) [ -11619.5392] [ 1382] [depth= 9] . ( 39 sec) [ -11513.5838] [ 1379] [depth= 7] . ( 39 sec) [ -11499.1601] [ 1379] [depth= 2] . ( 39 sec) [ -11453.4186] [ 1377] [depth= 4] . ( 39 sec) [ -11427.6590] [ 1377] [depth= 9] . ( 39 sec) [ -11427.3929] [ 1377] [depth= 1] . ( 39 sec) [ -11424.8800] [ 1377] [depth= 4] . ( 39 sec) [ -11400.3647] [ 1377] [depth= 7] . ( 40 sec) [ -11328.8293] [ 1374] [depth= 1] . ( 40 sec) [ -11139.3263] [ 1361] [depth= 15] . ( 40 sec) [ -11138.9019] [ 1361] [depth= 1] . ( 40 sec) [ -11138.4964] [ 1361] [depth= 5] . ( 40 sec) [ -11065.5508] [ 1348] [depth= 23] . ( 40 sec) [ -11057.7644] [ 1348] [depth= 21] . ( 40 sec) [ -10955.6852] [ 1321] [depth= 27] . ( 40 sec) [ -10789.4834] [ 1321] [depth= 1] . ( 40 sec) [ -10313.9360] [ 1323] [depth= 2] . ( 41 sec) [ -10257.5433] [ 1316] [depth= 19] . ( 41 sec) [ -10252.3376] [ 1316] [depth= 1] . ( 41 sec) [ -10238.3743] [ 1315] [depth= 21] . ( 41 sec) [ -9952.3895] [ 1315] [depth= 5] . ( 41 sec) [ -9842.3908] [ 1294] [depth= 21] . ( 41 sec) [ -9817.1921] [ 1294] [depth= 3] . ( 41 sec) [ -9782.8736] [ 1296] [depth= 2] . ( 42 sec) [ -9635.6519] [ 1294] [depth= 11] . ( 42 sec) [ -9616.3103] [ 1291] [depth= 28] . ( 42 sec) [ -9606.4566] [ 1291] [depth= 1] . ( 42 sec) [ -9590.8267] [ 1291] [depth= 30] . ( 42 sec) [ -9587.0210] [ 1291] [depth= 7] . ( 42 sec) [ -9526.5825] [ 1291] [depth= 27] . ( 42 sec) [ -9518.5501] [ 1291] [depth= 1] . ( 42 sec) [ -9511.6500] [ 1291] [depth= 2] . ( 43 sec) [ -9427.5983] [ 1273] [depth= 28] . ( 43 sec) [ -9421.2691] [ 1273] [depth= 1] . ( 43 sec) [ -9270.5099] [ 1273] [depth= 7] . ( 43 sec) [ -9243.5129] [ 1273] [depth= 18] . ( 43 sec) [ -9237.9147] [ 1273] [depth= 1] . ( 43 sec) [ -9237.8150] [ 1273] [depth= 1] . ( 43 sec) [ -9237.8048] [ 1273] [depth= 7] . ( 43 sec) [ -9237.7698] [ 1273] [depth= 3] . ( 44 sec) [ -9236.1340] [ 1273] [depth= 1] . ( 44 sec) [ -9228.2045] [ 1272] [depth= 18] . ( 44 sec) [ -9227.6496] [ 1273] [depth= 4] . ( 44 sec) [ -9160.5231] [ 1261] [depth= 30] . ( 44 sec) [ -9132.2204] [ 1256] [depth= 9] . ( 44 sec) [ -9094.1737] [ 1256] [depth= 11] . ( 44 sec) [ -9082.5073] [ 1252] [depth= 9] . ( 44 sec) [ -9082.4516] [ 1252] [depth= 3] . ( 45 sec) [ -9043.2694] [ 1251] [depth= 17] . ( 45 sec) [ -9043.2586] [ 1251] [depth= 3] . ( 45 sec) [ -9042.0497] [ 1251] [depth= 8] . ( 45 sec) [ -9041.8996] [ 1251] [depth= 16] . ( 45 sec) [ -9041.1444] [ 1251] [depth= 32] . ( 45 sec) [ -8954.7754] [ 1232] [depth= 31] . ( 45 sec) [ -8953.7000] [ 1236] [depth= 1] . ( 45 sec) [ -8945.4235] [ 1236] [depth= 28] . ( 46 sec) [ -8846.2576] [ 1211] [depth= 11] . ( 46 sec) [ -8842.8683] [ 1211] [depth= 2] . ( 46 sec) [ -8842.0943] [ 1207] [depth= 1] . ( 46 sec) [ -8826.4684] [ 1207] [depth= 8] . ( 46 sec) [ -8812.7738] [ 1207] [depth= 1] . ( 46 sec) [ -8809.4486] [ 1203] [depth= 6] . ( 46 sec) [ -8298.3053] [ 1158] [depth= 5] . ( 46 sec) [ -8295.3701] [ 1158] [depth= 29] . ( 47 sec) [ -8286.2370] [ 1158] [depth= 1] . ( 47 sec) [ -8264.7803] [ 1154] [depth= 18] . ( 47 sec) [ -8227.6983] [ 1154] [depth= 12] . ( 47 sec) [ -8203.0995] [ 1152] [depth= 19] . ( 47 sec) [ -8094.0371] [ 1127] [depth= 12] . ( 47 sec) [ -8056.0119] [ 1128] [depth= 1] . ( 47 sec) [ -8011.8149] [ 1127] [depth= 2] . ( 47 sec) [ -7959.9786] [ 1125] [depth= 16] . ( 47 sec) [ -7798.2349] [ 1125] [depth= 2] . ( 48 sec) [ -7735.5844] [ 1114] [depth= 19] . ( 48 sec) [ -7734.1874] [ 1114] [depth= 7] . ( 48 sec) [ -7635.5799] [ 1110] [depth= 5] . ( 48 sec) [ -7618.4247] [ 1110] [depth= 1] . ( 48 sec) [ -7617.3661] [ 1114] [depth= 1] . ( 48 sec) [ -7515.2764] [ 1093] [depth= 11] . ( 48 sec) [ -7503.3679] [ 1093] [depth= 6] . ( 48 sec) [ -7502.9954] [ 1093] [depth= 17] . ( 49 sec) [ -7471.3398] [ 1088] [depth= 1] . ( 49 sec) [ -7387.9844] [ 1073] [depth= 1] . ( 49 sec) [ -7378.8362] [ 1071] [depth= 11] . ( 49 sec) [ -7365.7689] [ 1065] [depth= 12] . ( 49 sec) [ -7337.8487] [ 1064] [depth= 1] . ( 49 sec) [ -7216.2468] [ 1063] [depth= 2] . ( 49 sec) [ -7212.2502] [ 1063] [depth= 1] . ( 49 sec) [ -7200.5433] [ 1062] [depth= 26] . ( 49 sec) [ -7194.0964] [ 1061] [depth= 9] . ( 50 sec) [ -7160.4991] [ 1060] [depth= 6] . ( 50 sec) [ -7160.4849] [ 1060] [depth= 7] . ( 50 sec) [ -7043.4741] [ 1029] [depth= 28] . ( 50 sec) [ -7043.4463] [ 1029] [depth= 35] . ( 50 sec) [ -7043.0430] [ 1029] [depth= 2] . ( 50 sec) [ -7009.2927] [ 1030] [depth= 2] . ( 50 sec) [ -6982.2587] [ 1030] [depth= 18] . ( 51 sec) [ -6976.3194] [ 1030] [depth= 4] . ( 51 sec) [ -6974.3448] [ 1031] [depth= 2] . ( 51 sec) [ -6965.2394] [ 1030] [depth= 2] . ( 51 sec) [ -6852.3051] [ 999] [depth= 5] . ( 51 sec) [ -6844.4783] [ 998] [depth= 11] . ( 51 sec) [ -6840.4389] [ 987] [depth= 4] . ( 51 sec) [ -6835.5307] [ 987] [depth= 15] . ( 51 sec) [ -6814.9446] [ 987] [depth= 7] . ( 51 sec) [ -6810.7794] [ 987] [depth= 4] . ( 52 sec) [ -6809.4590] [ 987] [depth= 16] . ( 52 sec) [ -6809.4267] [ 987] [depth= 5] . ( 52 sec) [ -6795.8777] [ 987] [depth= 18] . ( 52 sec) [ -6694.2332] [ 958] [depth= 4] . ( 52 sec) [ -6631.7298] [ 938] [depth= 21] . ( 52 sec) [ -6592.6304] [ 931] [depth= 7] . ( 52 sec) [ -6591.5470] [ 931] [depth= 31] . ( 52 sec) [ -6589.1813] [ 931] [depth= 3] . ( 53 sec) [ -6505.5024] [ 931] [depth= 3] . ( 53 sec) [ -6500.3876] [ 931] [depth= 5] . ( 53 sec) [ -6500.1347] [ 931] [depth= 3] . ( 53 sec) [ -6499.4781] [ 931] [depth= 24] . ( 53 sec) [ -6499.3268] [ 931] [depth= 3] . ( 53 sec) [ -6473.9966] [ 920] [depth= 14] . ( 53 sec) [ -6460.8701] [ 917] [depth= 15] . ( 53 sec) [ -6440.4697] [ 905] [depth= 5] . ( 54 sec) [ -6431.5677] [ 905] [depth= 2] . ( 54 sec) [ -6370.6188] [ 892] [depth= 3] . ( 54 sec) [ -6271.2957] [ 880] [depth= 7] . ( 54 sec) [ -6271.0382] [ 880] [depth= 2] . ( 54 sec) [ -6270.6165] [ 880] [depth= 2] . ( 54 sec) [ -6252.2595] [ 880] [depth= 14] . ( 54 sec) [ -6247.9652] [ 878] [depth= 2] . ( 54 sec) [ -6245.5306] [ 878] [depth= 2] . ( 55 sec) [ -6140.5291] [ 853] [depth= 12] . ( 55 sec) [ -6136.4147] [ 853] [depth= 14] . ( 55 sec) [ -6012.0985] [ 834] [depth= 15] . ( 55 sec) [ -5914.0247] [ 834] [depth= 1] . ( 55 sec) [ -5710.9365] [ 791] [depth= 17] . ( 55 sec) [ -5687.2970] [ 791] [depth= 3] . ( 55 sec) [ -5679.8028] [ 790] [depth= 3] . ( 55 sec) [ -5639.2421] [ 790] [depth= 12] . ( 55 sec) [ -5638.7796] [ 790] [depth= 2] . ( 56 sec) [ -5638.3314] [ 790] [depth= 2] . ( 56 sec) [ -5638.3175] [ 790] [depth= 7] . ( 56 sec) [ -5635.0508] [ 790] [depth= 2] . ( 56 sec) [ -5634.9969] [ 790] [depth= 14] . ( 56 sec) [ -5479.3300] [ 790] [depth= 4] . ( 56 sec) [ -5470.8677] [ 792] [depth= 1] . ( 56 sec) [ -5453.1844] [ 788] [depth= 27] . ( 56 sec) [ -5447.8439] [ 788] [depth= 4] . ( 57 sec) [ -5439.9883] [ 787] [depth= 1] . ( 57 sec) [ -5436.7160] [ 787] [depth= 1] . ( 57 sec) [ -5436.6569] [ 787] [depth= 18] . ( 57 sec) [ -5432.0103] [ 787] [depth= 5] . ( 57 sec) [ -5431.9094] [ 787] [depth= 26] . ( 57 sec) [ -5421.8639] [ 787] [depth= 4] . ( 57 sec) [ -5421.7650] [ 787] [depth= 9] . ( 58 sec) [ -5417.1599] [ 787] [depth= 4] . ( 58 sec) [ -5416.5142] [ 787] [depth= 13] . ( 58 sec) [ -5416.5034] [ 787] [depth= 16] . ( 58 sec) [ -5414.0902] [ 787] [depth= 1] . ( 58 sec) [ -5412.5123] [ 787] [depth= 7] . ( 59 sec) [ -5409.0119] [ 787] [depth= 5] . ( 59 sec) [ -5401.7861] [ 786] [depth= 1] . ( 59 sec) [ -5330.3586] [ 758] [depth= 21] . ( 59 sec) [ -5328.7961] [ 758] [depth= 2] . ( 60 sec) [ -5328.7791] [ 758] [depth= 2] . ( 60 sec) [ -5324.8961] [ 758] [depth= 1] . ( 60 sec) [ -5261.9314] [ 747] [depth= 11] . ( 60 sec) [ -5253.0658] [ 746] [depth= 3] . ( 60 sec) [ -5235.6286] [ 736] [depth= 8] . ( 60 sec) [ -5224.5456] [ 735] [depth= 1] . ( 60 sec) [ -5222.1899] [ 733] [depth= 2] . ( 61 sec) [ -5222.0920] [ 733] [depth= 15] . ( 61 sec) [ -5210.0241] [ 731] [depth= 1] . ( 61 sec) [ -5201.6363] [ 729] [depth= 2] . ( 61 sec) [ -5089.2776] [ 699] [depth= 2] . ( 61 sec) [ -5009.0253] [ 666] [depth= 4] . ( 61 sec) [ -5008.5998] [ 666] [depth= 3] . ( 61 sec) [ -5006.7082] [ 666] [depth= 19] . ( 62 sec) [ -5006.6119] [ 666] [depth= 1] . ( 62 sec) [ -5006.2334] [ 668] [depth= 2] . ( 62 sec) [ -5005.9050] [ 668] [depth= 2] . ( 62 sec) [ -5001.6777] [ 668] [depth= 3] . ( 62 sec) [ -4997.9592] [ 668] [depth= 3] . ( 63 sec) [ -4997.7991] [ 668] [depth= 18] . ( 63 sec) [ -4996.4150] [ 668] [depth= 11] . ( 63 sec) [ -4912.6314] [ 645] [depth= 14] . ( 63 sec) [ -4911.9666] [ 645] [depth= 3] . ( 63 sec) [ -4911.7124] [ 645] [depth= 2] . ( 63 sec) [ -4911.6894] [ 645] [depth= 2] . ( 63 sec) [ -4911.6736] [ 645] [depth= 7] . ( 63 sec) [ -4910.7364] [ 644] [depth= 5] . ( 64 sec) [ -4910.7173] [ 644] [depth= 4] . ( 64 sec) [ -4910.1758] [ 644] [depth= 4] . ( 64 sec) [ -4910.0152] [ 644] [depth= 1] . ( 64 sec) [ -4905.4141] [ 644] [depth= 2] . ( 64 sec) [ -4900.8702] [ 646] [depth= 10] . ( 64 sec) [ -4900.6645] [ 646] [depth= 5] . ( 65 sec) [ -4898.6567] [ 646] [depth= 8] . ( 65 sec) [ -4897.6398] [ 646] [depth= 17] . ( 65 sec) [ -4895.3087] [ 646] [depth= 4] . ( 65 sec) [ -4895.1441] [ 646] [depth= 4] . ( 65 sec) [ -4894.8655] [ 646] [depth= 4] . ( 65 sec) [ -4894.8365] [ 646] [depth= 5] . ( 65 sec) [ -4892.7580] [ 646] [depth= 7] . ( 65 sec) [ -4892.5529] [ 646] [depth= 6] . ( 66 sec) [ -4892.2952] [ 646] [depth= 2] . ( 66 sec) [ -4884.7783] [ 646] [depth= 16] . ( 66 sec) [ -4884.5754] [ 646] [depth= 5] . ( 66 sec) [ -4884.5584] [ 646] [depth= 1] . ( 66 sec) [ -4882.2638] [ 646] [depth= 5] . ( 66 sec) [ -4880.9593] [ 646] [depth= 3] . ( 66 sec) [ -4880.9401] [ 646] [depth= 7] . ( 66 sec) [ -4862.9894] [ 643] [depth= 8] . ( 67 sec) [ -4839.9212] [ 642] [depth= 6] . ( 67 sec) [ -4832.9075] [ 642] [depth= 2] . ( 67 sec) [ -4831.2609] [ 642] [depth= 10] . ( 67 sec) [ -4831.1769] [ 642] [depth= 12] . ( 67 sec) [ -4831.0825] [ 642] [depth= 12] . ( 68 sec) [ -4653.2289] [Branch lengths ] . ( 71 sec) [ -4645.0384] [GTR parameters ] . ( 71 sec) [ -4591.4815] [Alpha ][ 0.250961] . ( 71 sec) [ -4591.4705] [ 642] [depth= 1] . ( 74 sec) [ -4591.4426] [ 642] [depth= 7] . ( 74 sec) [ -4587.8798] [ 642] [depth= 2] . ( 74 sec) [ -4587.8571] [ 642] [depth= 3] . ( 74 sec) [ -4583.1982] [ 641] [depth= 5] . ( 74 sec) [ -4583.0887] [ 641] [depth= 2] . ( 75 sec) [ -4583.0315] [ 641] [depth= 25] . ( 75 sec) [ -4582.9671] [ 641] [depth= 9] . ( 75 sec) [ -4582.8945] [ 641] [depth= 14] . ( 75 sec) [ -4575.5903] [ 640] [depth= 19] . ( 75 sec) [ -4575.4361] [ 640] [depth= 3] . ( 75 sec) [ -4575.4179] [ 640] [depth= 1] . ( 76 sec) [ -4575.4048] [ 640] [depth= 10] . ( 76 sec) [ -4575.3831] [ 640] [depth= 6] . ( 76 sec) [ -4575.3493] [ 640] [depth= 22] . ( 77 sec) [ -4575.3257] [ 640] [depth= 5] . ( 77 sec) [ -4575.2938] [ 640] [depth= 5] . ( 78 sec) [ -4575.1594] [ 640] [depth= 7] . ( 79 sec) [ -4575.1462] [ 640] [depth= 1] . ( 80 sec) [ -4575.1259] [ 640] [depth= 12] . ( 80 sec) [ -4570.3697] [ 640] [depth= 13] . ( 81 sec) [ -4569.1259] [ 640] [depth= 1] . ( 81 sec) [ -4569.0994] [ 640] [depth= 6] . ( 81 sec) [ -4569.0807] [ 640] [depth= 4] . ( 82 sec) [ -4568.8566] [ 640] [depth= 4] . ( 83 sec) [ -4568.8049] [ 640] [depth= 9] . ( 83 sec) [ -4568.6017] [ 640] [depth= 1] . ( 83 sec) [ -4568.5824] [ 640] [depth= 1] . ( 84 sec) [ -4567.3499] [ 640] [depth= 3] . ( 84 sec) [ -4567.3271] [ 640] [depth= 1] . ( 85 sec) [ -4545.4445] [ 615] [depth= 32] . ( 85 sec) [ -4489.1241] [ 602] [depth= 6] . ( 85 sec) [ -4475.6193] [ 599] [depth= 2] . ( 85 sec) [ -4473.3491] [ 599] [depth= 3] . ( 85 sec) [ -4467.5577] [ 598] [depth= 8] . ( 86 sec) [ -4467.4785] [ 598] [depth= 4] . ( 87 sec) [ -4467.2687] [ 598] [depth= 8] . ( 88 sec) [ -4466.9933] [ 598] [depth= 26] . ( 88 sec) [ -4466.7336] [ 598] [depth= 3] . ( 89 sec) [ -4466.7183] [ 598] [depth= 32] . ( 89 sec) [ -4466.7060] [ 598] [depth= 1] . ( 89 sec) [ -4363.1775] [ 579] [depth= 30] . ( 89 sec) [ -4362.9621] [ 579] [depth= 1] . ( 91 sec) [ -4362.6900] [ 579] [depth= 5] . ( 91 sec) [ -4362.6759] [ 579] [depth= 9] . ( 91 sec) [ -4362.6643] [ 579] [depth= 7] . ( 93 sec) [ -4362.6427] [ 579] [depth= 1] . ( 93 sec) [ -4362.5985] [ 579] [depth= 4] . ( 93 sec) [ -4349.9781] [ 577] [depth= 2] . ( 95 sec) [ -4340.4799] [ 573] [depth= 34] . ( 96 sec) [ -4340.4546] [ 573] [depth= 3] . ( 99 sec) [ -4333.1031] [ 572] [depth= 19] . ( 100 sec) [ -4332.9452] [ 572] [depth= 22] . ( 103 sec) [ -4329.4965] [ 571] [depth= 1] . ( 103 sec) [ -4329.4855] [ 571] [depth= 35] . ( 103 sec) [ -4328.8862] [ 571] [depth= 22] . ( 103 sec) [ -4328.8650] [ 571] [depth= 8] . ( 103 sec) [ -4328.8342] [ 571] [depth= 26] . ( 104 sec) [ -4327.7879] [ 571] [depth= 24] . ( 104 sec) [ -4300.2050] [ 565] [depth= 6] . ( 104 sec) [ -4300.1914] [ 565] [depth= 3] . ( 104 sec) [ -4290.0586] [ 553] [depth= 14] . ( 105 sec) [ -4168.7519] [ 519] [depth= 10] . ( 105 sec) [ -4163.0560] [ 519] [depth= 3] . ( 105 sec) [ -4163.0323] [ 519] [depth= 6] . ( 105 sec) [ -4163.0062] [ 519] [depth= 2] . ( 105 sec) [ -4162.9956] [ 519] [depth= 11] . ( 107 sec) [ -4162.9827] [ 519] [depth= 3] . ( 107 sec) [ -4162.9584] [ 519] [depth= 25] . ( 108 sec) [ -4162.9468] [ 519] [depth= 3] . ( 108 sec) [ -4162.9311] [ 519] [depth= 32] . ( 109 sec) [ -4162.9201] [ 519] [depth= 6] . ( 109 sec) [ -4153.4941] [ 517] [depth= 23] . ( 109 sec) [ -4153.4364] [ 517] [depth= 6] . ( 110 sec) [ -4153.4259] [ 517] [depth= 5] . ( 114 sec) [ -4153.4011] [ 517] [depth= 3] . ( 114 sec) [ -4153.3666] [ 517] [depth= 3] . ( 115 sec) [ -4153.2915] [ 517] [depth= 1] . ( 115 sec) [ -4152.0275] [ 517] [depth= 4] . ( 116 sec) [ -4142.4540] [ 517] [depth= 8] . ( 125 sec) [ -4135.3759] [ 515] [depth= 5] . ( 125 sec) [ -4134.1567] [ 519] [depth= 1] . ( 126 sec) [ -4125.7106] [ 519] [depth= 2] . ( 126 sec) [ -4125.6883] [ 519] [depth= 5] . ( 127 sec) [ -4125.6766] [ 519] [depth= 4] . ( 127 sec) [ -4123.9752] [ 519] [depth= 9] . ( 127 sec) [ -4123.8297] [ 519] [depth= 8] . ( 127 sec) [ -4123.6242] [ 519] [depth= 5] . ( 130 sec) [ -4123.6138] [ 519] [depth= 10] . ( 130 sec) [ -4122.6229] [ 519] [depth= 23] . ( 130 sec) [ -4122.6076] [ 519] [depth= 18] . ( 131 sec) [ -4122.5745] [ 519] [depth= 2] . ( 134 sec) [ -4106.3057] [ 510] [depth= 6] . ( 136 sec) [ -4106.2850] [ 510] [depth= 3] . ( 136 sec) [ -4106.0571] [ 510] [depth= 2] . ( 137 sec) [ -4030.6106] [ 492] [depth= 18] . ( 137 sec) [ -4026.1781] [ 492] [depth= 2] . ( 137 sec) [ -4026.1644] [ 492] [depth= 3] . ( 137 sec) [ -4019.7081] [ 491] [depth= 1] . ( 137 sec) [ -4019.6976] [ 491] [depth= 2] . ( 137 sec) [ -3987.1015] [ 480] [depth= 1] . ( 137 sec) [ -3981.4418] [ 480] [depth= 11] . ( 138 sec) [ -3981.4150] [ 480] [depth= 18] . ( 138 sec) [ -3981.2241] [ 480] [depth= 3] . ( 138 sec) [ -3981.1970] [ 480] [depth= 5] . ( 139 sec) [ -3970.3927] [ 478] [depth= 33] . ( 139 sec) [ -3970.3700] [ 478] [depth= 1] . ( 140 sec) [ -3970.2875] [ 478] [depth= 6] . ( 141 sec) [ -3970.2484] [ 478] [depth= 11] . ( 142 sec) [ -3970.2361] [ 478] [depth= 14] . ( 143 sec) [ -3970.2258] [ 478] [depth= 3] . ( 143 sec) [ -3970.0222] [ 478] [depth= 1] . ( 143 sec) [ -3969.9972] [ 478] [depth= 4] . ( 143 sec) [ -3969.7108] [ 478] [depth= 9] . ( 144 sec) [ -3969.3439] [ 478] [depth= 5] . ( 144 sec) [ -3969.3336] [ 478] [depth= 6] . ( 145 sec) [ -3969.3054] [ 478] [depth= 2] . ( 147 sec) [ -3969.2835] [ 478] [depth= 6] . ( 147 sec) [ -3912.5735] [ 458] [depth= 10] . ( 147 sec) [ -3912.5567] [ 458] [depth= 3] . ( 147 sec) [ -3905.0660] [ 457] [depth= 4] . ( 148 sec) [ -3904.9850] [ 457] [depth= 10] . ( 148 sec) [ -3904.9696] [ 457] [depth= 13] . ( 149 sec) [ -3904.8362] [ 457] [depth= 2] . ( 149 sec) [ -3904.8096] [ 457] [depth= 2] . ( 149 sec) [ -3904.7735] [ 457] [depth= 1] . ( 150 sec) [ -3904.7621] [ 457] [depth= 6] . ( 151 sec) [ -3904.7287] [ 457] [depth= 6] . ( 152 sec) [ -3904.7167] [ 457] [depth= 1] . ( 152 sec) [ -3897.0695] [ 456] [depth= 9] . ( 152 sec) [ -3897.0593] [ 456] [depth= 3] . ( 153 sec) [ -3896.9267] [ 456] [depth= 6] . ( 153 sec) [ -3896.7973] [ 456] [depth= 3] . ( 156 sec) [ -3896.2682] [ 456] [depth= 1] . ( 156 sec) [ -3896.2538] [ 456] [depth= 3] . ( 158 sec) [ -3876.5617] [ 452] [depth= 7] . ( 158 sec) [ -3875.3920] [ 452] [depth= 1] . ( 159 sec) [ -3875.3508] [ 452] [depth= 2] . ( 160 sec) [ -3875.3062] [ 452] [depth= 6] . ( 161 sec) [ -3848.8631] [ 439] [depth= 27] . ( 161 sec) [ -3848.0246] [ 440] [depth= 1] . ( 161 sec) [ -3848.0138] [ 440] [depth= 2] . ( 161 sec) [ -3848.0032] [ 440] [depth= 2] . ( 161 sec) [ -3847.9926] [ 440] [depth= 7] . ( 165 sec) [ -3847.9708] [ 440] [depth= 1] . ( 165 sec) [ -3843.2239] [ 436] [depth= 6] . ( 165 sec) [ -3808.3920] [ 428] [depth= 5] . ( 165 sec) [ -3808.3284] [ 428] [depth= 1] . ( 165 sec) [ -3808.3179] [ 428] [depth= 10] . ( 170 sec) [ -3808.2372] [ 428] [depth= 1] . ( 175 sec) [ -3808.1385] [ 428] [depth= 1] . ( 175 sec) [ -3807.7702] [ 428] [depth= 4] . ( 175 sec) [ -3807.6406] [ 428] [depth= 2] . ( 177 sec) [ -3807.6275] [ 428] [depth= 3] . ( 177 sec) [ -3807.5789] [ 428] [depth= 7] . ( 177 sec) [ -3807.1932] [ 428] [depth= 2] . ( 177 sec) [ -3807.0707] [ 428] [depth= 5] . ( 178 sec) [ -3807.0301] [ 428] [depth= 2] . ( 182 sec) [ -3794.1640] [ 426] [depth= 8] . ( 184 sec) [ -3794.1500] [ 426] [depth= 3] . ( 185 sec) [ -3794.1293] [ 426] [depth= 6] . ( 185 sec) [ -3794.1166] [ 426] [depth= 3] . ( 186 sec) [ -3789.2150] [ 425] [depth= 6] . ( 187 sec) [ -3789.2048] [ 425] [depth= 9] . ( 187 sec) [ -3786.9618] [ 424] [depth= 1] . ( 187 sec) [ -3786.9483] [ 424] [depth= 8] . ( 187 sec) [ -3786.9238] [ 424] [depth= 2] . ( 187 sec) [ -3786.9099] [ 424] [depth= 1] . ( 188 sec) [ -3786.8743] [ 424] [depth= 7] . ( 188 sec) [ -3786.7721] [ 424] [depth= 3] . ( 188 sec) [ -3781.8443] [ 423] [depth= 6] . ( 201 sec) [ -3781.7424] [ 423] [depth= 3] . ( 201 sec) [ -3780.3847] [ 423] [depth= 2] . ( 201 sec) [ -3780.3447] [ 423] [depth= 4] . ( 202 sec) [ -3780.3321] [ 423] [depth= 8] . ( 202 sec) [ -3780.2703] [ 423] [depth= 3] . ( 202 sec) [ -3779.3550] [ 423] [depth= 2] . ( 202 sec) [ -3779.1086] [ 423] [depth= 3] . ( 202 sec) [ -3775.7994] [ 423] [depth= 1] . ( 202 sec) [ -3775.7594] [ 423] [depth= 2] . ( 204 sec) [ -3774.6495] [ 423] [depth= 3] . ( 205 sec) [ -3774.6343] [ 423] [depth= 1] . ( 206 sec) [ -3774.6175] [ 423] [depth= 4] . ( 206 sec) [ -3772.9650] [ 419] [depth= 2] . ( 208 sec) [ -3772.9456] [ 419] [depth= 3] . ( 215 sec) [ -3772.9323] [ 419] [depth= 2] . ( 215 sec) [ -3742.6125] [ 412] [depth= 8] . ( 215 sec) [ -3738.6735] [ 413] [depth= 14] . ( 215 sec) [ -3736.3339] [ 413] [depth= 5] . ( 215 sec) [ -3731.4804] [ 413] [depth= 12] . ( 217 sec) [ -3731.4636] [ 413] [depth= 10] . ( 218 sec) [ -3731.3507] [ 413] [depth= 5] . ( 218 sec) [ -3729.1135] [ 414] [depth= 2] . ( 219 sec) [ -3729.0829] [ 414] [depth= 3] . ( 219 sec) [ -3728.2546] [ 414] [depth= 1] . ( 219 sec) [ -3728.2397] [ 414] [depth= 1] . ( 220 sec) [ -3728.2263] [ 414] [depth= 9] . ( 220 sec) [ -3728.2137] [ 414] [depth= 19] . ( 220 sec) [ -3728.1682] [ 414] [depth= 6] . ( 220 sec) [ -3727.7212] [ 414] [depth= 2] . ( 221 sec) [ -3727.6745] [ 414] [depth= 1] . ( 222 sec) [ -3725.3757] [ 414] [depth= 3] . ( 222 sec) [ -3725.3630] [ 414] [depth= 4] . ( 223 sec) [ -3725.3508] [ 414] [depth= 2] . ( 223 sec) [ -3725.3336] [ 414] [depth= 7] . ( 223 sec) [ -3725.3166] [ 414] [depth= 3] . ( 223 sec) [ -3725.2992] [ 414] [depth= 10] . ( 229 sec) [ -3725.2777] [ 414] [depth= 2] . ( 229 sec) [ -3722.5004] [ 413] [depth= 8] . ( 231 sec) [ -3722.3104] [ 413] [depth= 8] . ( 232 sec) [ -3708.3003] [ 411] [depth= 4] . ( 232 sec) [ -3708.1758] [ 411] [depth= 3] . ( 233 sec) [ -3708.0827] [ 411] [depth= 8] . ( 233 sec) [ -3708.0570] [ 411] [depth= 2] . ( 233 sec) [ -3692.1805] [Branch lengths ] . ( 235 sec) [ -3690.6085] [GTR parameters ] . ( 235 sec) [ -3686.2109] [Alpha ][ 0.379679] . ( 237 sec) [ -3680.7611] [ 410] [depth= 1] . ( 241 sec) [ -3633.0280] [ 395] [depth= 11] . ( 241 sec) [ -3592.3947] [ 387] [depth= 3] . ( 252 sec) [ -3585.6060] [ 385] [depth= 8] . ( 252 sec) [ -3560.3947] [ 381] [depth= 11] . ( 252 sec) [ -3559.8805] [ 381] [depth= 3] . ( 254 sec) [ -3559.8007] [ 381] [depth= 16] . ( 255 sec) [ -3559.5558] [ 381] [depth= 3] . ( 266 sec) [ -3555.3596] [ 380] [depth= 1] . ( 271 sec) [ -3555.3080] [ 380] [depth= 1] . ( 282 sec) [ -3553.6198] [ 379] [depth= 4] . ( 284 sec) [ -3551.9352] [ 378] [depth= 8] . ( 286 sec) [ -3551.9196] [ 378] [depth= 5] . ( 299 sec) [ -3551.8960] [ 378] [depth= 3] . ( 304 sec) [ -3543.5864] [ 376] [depth= 6] . ( 307 sec) [ -3543.4746] [ 376] [depth= 1] . ( 318 sec) [ -3543.4354] [ 376] [depth= 3] . ( 319 sec) [ -3543.1896] [ 376] [depth= 3] . ( 320 sec) [ -3543.0417] [ 376] [depth= 2] . ( 322 sec) [ -3543.0141] [ 376] [depth= 3] . ( 326 sec) [ -3537.1954] [ 375] [depth= 3] . ( 329 sec) [ -3516.1000] [ 370] [depth= 5] . ( 329 sec) [ -3516.0749] [ 370] [depth= 2] . ( 336 sec) [ -3516.0419] [ 370] [depth= 1] . ( 363 sec) [ -3513.1627] [ 369] [depth= 4] . ( 369 sec) [ -3512.9723] [ 369] [depth= 1] . ( 400 sec) [ -3512.9022] [ 369] [depth= 3] . ( 423 sec) [ -3512.8900] [ 369] [depth= 2] . ( 442 sec) [ -3512.8277] [ 369] [depth= 1] . ( 452 sec) [ -3512.6629] [ 369] [depth= 3] . ( 459 sec) [ -3511.0248] [Branch lengths ] . ( 461 sec) [ -3510.6440] [GTR parameters ] . ( 461 sec) [ -3508.1859] [Alpha ][ 0.559630] . ( 688 sec) [ -3508.0726] [Branch lengths ] . ( 808 sec) [ -3508.0698] [Branch lengths ] . ( 808 sec) [ -3508.0698] [Topology ] . ( 810 sec) [ -3508.0697] [Topology ] . ( 812 sec) [ -3508.0293] [GTR parameters ] . ( 812 sec) [ -3508.0231] [Alpha ][ 0.571259] . ( 812 sec) [ -3508.0231] [Topology ] . ( 814 sec) [ -3508.0229] [Topology ] . ( 815 sec) [ -3508.0228] [GTR parameters ] . ( 815 sec) [ -3508.0228] [Alpha ][ 0.571830] . Checking for NNIs, optimizing five branches... . Log likelihood of the current tree: -3508.022812. . [Random start 4/ 5] . Computing pairwise distances... . Building BioNJ tree... . Randomising the tree... . Maximizing likelihood (using SPR moves)... . ( 4 sec) [ -55599.0748] [GTR parameters ] . ( 4 sec) [ -54936.8069] [Alpha ][ 0.500960] . ( 4 sec) [ -54034.2154] [ 3270] [depth= 6] . ( 5 sec) [ -53847.5682] [ 3254] [depth= 5] . ( 5 sec) [ -53750.2870] [ 3254] [depth= 1] . ( 5 sec) [ -53269.7047] [ 3238] [depth= 17] . ( 5 sec) [ -53162.5240] [ 3236] [depth= 2] . ( 5 sec) [ -53054.0763] [ 3234] [depth= 2] . ( 5 sec) [ -52439.5937] [ 3233] [depth= 1] . ( 5 sec) [ -52253.3198] [ 3227] [depth= 14] . ( 5 sec) [ -52198.3926] [ 3218] [depth= 1] . ( 5 sec) [ -51931.5075] [ 3212] [depth= 11] . ( 6 sec) [ -51116.5512] [ 3210] [depth= 4] . ( 6 sec) [ -51058.3670] [ 3210] [depth= 3] . ( 6 sec) [ -50742.9040] [ 3196] [depth= 3] . ( 6 sec) [ -50733.6003] [ 3196] [depth= 1] . ( 6 sec) [ -50073.3482] [ 3194] [depth= 6] . ( 6 sec) [ -49734.3786] [ 3194] [depth= 3] . ( 6 sec) [ -49637.4141] [ 3192] [depth= 2] . ( 6 sec) [ -49479.8004] [ 3192] [depth= 2] . ( 6 sec) [ -49410.9953] [ 3188] [depth= 6] . ( 7 sec) [ -49283.5455] [ 3188] [depth= 3] . ( 7 sec) [ -49227.1320] [ 3186] [depth= 3] . ( 7 sec) [ -48938.8612] [ 3184] [depth= 13] . ( 7 sec) [ -48701.5156] [ 3180] [depth= 2] . ( 7 sec) [ -48615.9895] [ 3180] [depth= 1] . ( 7 sec) [ -48423.3402] [ 3179] [depth= 7] . ( 7 sec) [ -48187.0887] [ 3169] [depth= 6] . ( 7 sec) [ -48026.8749] [ 3151] [depth= 9] . ( 8 sec) [ -47623.8435] [ 3133] [depth= 10] . ( 8 sec) [ -47621.5329] [ 3133] [depth= 1] . ( 8 sec) [ -47457.6588] [ 3133] [depth= 2] . ( 8 sec) [ -46518.4724] [ 3092] [depth= 5] . ( 8 sec) [ -46518.4448] [ 3092] [depth= 2] . ( 8 sec) [ -46432.6537] [ 3092] [depth= 5] . ( 8 sec) [ -46062.8402] [ 3079] [depth= 22] . ( 8 sec) [ -45680.7402] [ 3074] [depth= 3] . ( 9 sec) [ -45661.4629] [ 3074] [depth= 1] . ( 9 sec) [ -45079.0464] [ 3065] [depth= 16] . ( 9 sec) [ -45008.0983] [ 3065] [depth= 6] . ( 9 sec) [ -44591.7180] [ 3067] [depth= 1] . ( 9 sec) [ -44388.6523] [ 3049] [depth= 13] . ( 9 sec) [ -44387.9715] [ 3049] [depth= 3] . ( 9 sec) [ -44287.3265] [ 3026] [depth= 8] . ( 9 sec) [ -44156.9768] [ 3022] [depth= 13] . ( 10 sec) [ -43846.9814] [ 3022] [depth= 26] . ( 10 sec) [ -43751.5321] [ 2999] [depth= 1] . ( 10 sec) [ -43518.5320] [ 2990] [depth= 5] . ( 10 sec) [ -43498.9891] [ 2989] [depth= 6] . ( 10 sec) [ -43291.9255] [ 2989] [depth= 4] . ( 10 sec) [ -43078.7629] [ 2978] [depth= 3] . ( 10 sec) [ -43053.8491] [ 2978] [depth= 8] . ( 10 sec) [ -43027.3867] [ 2979] [depth= 2] . ( 11 sec) [ -42887.7073] [ 2963] [depth= 20] . ( 11 sec) [ -42866.6334] [ 2962] [depth= 20] . ( 11 sec) [ -42108.3691] [ 2950] [depth= 5] . ( 11 sec) [ -41983.2874] [ 2934] [depth= 23] . ( 11 sec) [ -41822.4358] [ 2932] [depth= 14] . ( 11 sec) [ -41807.5821] [ 2932] [depth= 4] . ( 11 sec) [ -41417.8608] [ 2929] [depth= 11] . ( 11 sec) [ -41089.5084] [ 2912] [depth= 16] . ( 12 sec) [ -40923.2934] [ 2912] [depth= 21] . ( 12 sec) [ -40772.9998] [ 2902] [depth= 10] . ( 12 sec) [ -40114.6242] [ 2901] [depth= 6] . ( 12 sec) [ -39263.8167] [ 2899] [depth= 9] . ( 12 sec) [ -38868.7855] [ 2899] [depth= 1] . ( 12 sec) [ -38708.6449] [ 2881] [depth= 4] . ( 12 sec) [ -38635.2916] [ 2863] [depth= 8] . ( 12 sec) [ -38581.0619] [ 2860] [depth= 9] . ( 13 sec) [ -38525.4680] [ 2860] [depth= 15] . ( 13 sec) [ -38407.9467] [ 2845] [depth= 11] . ( 13 sec) [ -38314.8877] [ 2833] [depth= 1] . ( 13 sec) [ -38133.3509] [ 2815] [depth= 24] . ( 13 sec) [ -38131.1547] [ 2815] [depth= 1] . ( 13 sec) [ -37913.6775] [ 2798] [depth= 11] . ( 13 sec) [ -37829.7337] [ 2782] [depth= 14] . ( 13 sec) [ -37704.2552] [ 2782] [depth= 5] . ( 14 sec) [ -37694.9414] [ 2782] [depth= 1] . ( 14 sec) [ -37688.0540] [ 2772] [depth= 6] . ( 14 sec) [ -37645.2186] [ 2772] [depth= 2] . ( 14 sec) [ -37622.7411] [ 2771] [depth= 7] . ( 14 sec) [ -37447.8504] [ 2771] [depth= 2] . ( 14 sec) [ -37322.1830] [ 2762] [depth= 9] . ( 14 sec) [ -37241.2647] [ 2741] [depth= 11] . ( 14 sec) [ -37146.1758] [ 2727] [depth= 10] . ( 14 sec) [ -37145.5618] [ 2727] [depth= 1] . ( 15 sec) [ -37144.7943] [ 2727] [depth= 6] . ( 15 sec) [ -36940.1846] [ 2724] [depth= 13] . ( 15 sec) [ -36938.1000] [ 2723] [depth= 7] . ( 15 sec) [ -36843.4818] [ 2707] [depth= 3] . ( 15 sec) [ -36837.9225] [ 2707] [depth= 6] . ( 15 sec) [ -36834.9938] [ 2707] [depth= 6] . ( 15 sec) [ -36832.5262] [ 2707] [depth= 1] . ( 15 sec) [ -36819.7232] [ 2707] [depth= 3] . ( 16 sec) [ -36599.3317] [ 2673] [depth= 20] . ( 16 sec) [ -36594.5256] [ 2672] [depth= 2] . ( 16 sec) [ -36594.3797] [ 2672] [depth= 2] . ( 16 sec) [ -36594.3232] [ 2672] [depth= 1] . ( 16 sec) [ -36587.0514] [ 2671] [depth= 5] . ( 16 sec) [ -36568.9659] [ 2671] [depth= 15] . ( 16 sec) [ -36543.9966] [ 2671] [depth= 24] . ( 16 sec) [ -36541.5836] [ 2671] [depth= 6] . ( 17 sec) [ -36196.3764] [ 2658] [depth= 5] . ( 17 sec) [ -35992.1622] [ 2658] [depth= 6] . ( 17 sec) [ -35921.0257] [ 2645] [depth= 2] . ( 17 sec) [ -35837.5896] [ 2644] [depth= 12] . ( 17 sec) [ -35776.0961] [ 2644] [depth= 1] . ( 17 sec) [ -35610.2062] [ 2644] [depth= 27] . ( 17 sec) [ -35427.1192] [ 2644] [depth= 1] . ( 17 sec) [ -35323.8911] [ 2630] [depth= 24] . ( 18 sec) [ -35321.0009] [ 2630] [depth= 1] . ( 18 sec) [ -35290.4579] [ 2630] [depth= 7] . ( 18 sec) [ -35226.5563] [ 2619] [depth= 2] . ( 18 sec) [ -34879.2988] [ 2618] [depth= 2] . ( 18 sec) [ -34879.2065] [ 2618] [depth= 28] . ( 18 sec) [ -34863.9521] [ 2616] [depth= 20] . ( 18 sec) [ -34812.6706] [ 2601] [depth= 1] . ( 18 sec) [ -34717.8863] [ 2597] [depth= 7] . ( 19 sec) [ -34411.3468] [ 2596] [depth= 3] . ( 19 sec) [ -33348.7567] [ 2551] [depth= 20] . ( 19 sec) [ -32873.9986] [ 2551] [depth= 12] . ( 19 sec) [ -32859.3719] [ 2551] [depth= 2] . ( 19 sec) [ -32857.5258] [ 2551] [depth= 2] . ( 19 sec) [ -32853.3499] [ 2551] [depth= 2] . ( 19 sec) [ -32724.4229] [ 2548] [depth= 14] . ( 19 sec) [ -31902.9302] [ 2548] [depth= 1] . ( 19 sec) [ -31385.4293] [ 2548] [depth= 1] . ( 20 sec) [ -31370.8870] [ 2548] [depth= 1] . ( 20 sec) [ -31266.0194] [ 2536] [depth= 6] . ( 20 sec) [ -30997.5806] [ 2500] [depth= 18] . ( 20 sec) [ -30422.2274] [ 2464] [depth= 14] . ( 20 sec) [ -30069.1608] [ 2461] [depth= 17] . ( 20 sec) [ -30006.6804] [ 2462] [depth= 1] . ( 20 sec) [ -29741.6977] [ 2453] [depth= 11] . ( 20 sec) [ -29699.6475] [ 2439] [depth= 6] . ( 21 sec) [ -29617.8124] [ 2426] [depth= 16] . ( 21 sec) [ -28897.2880] [ 2425] [depth= 8] . ( 21 sec) [ -28880.1247] [ 2427] [depth= 4] . ( 21 sec) [ -28780.5729] [ 2404] [depth= 16] . ( 21 sec) [ -28654.4546] [ 2384] [depth= 10] . ( 21 sec) [ -28345.5197] [ 2376] [depth= 16] . ( 21 sec) [ -28123.7640] [ 2375] [depth= 15] . ( 22 sec) [ -28092.6539] [ 2374] [depth= 12] . ( 22 sec) [ -27988.2771] [ 2374] [depth= 3] . ( 22 sec) [ -27940.0681] [ 2372] [depth= 1] . ( 22 sec) [ -27936.4115] [ 2372] [depth= 1] . ( 22 sec) [ -27915.3690] [ 2369] [depth= 1] . ( 22 sec) [ -27887.7919] [ 2369] [depth= 1] . ( 22 sec) [ -27885.0959] [ 2369] [depth= 1] . ( 22 sec) [ -27752.9404] [ 2354] [depth= 25] . ( 22 sec) [ -27749.8747] [ 2354] [depth= 5] . ( 23 sec) [ -27738.5087] [ 2354] [depth= 17] . ( 23 sec) [ -27738.1871] [ 2354] [depth= 4] . ( 23 sec) [ -27555.7764] [ 2342] [depth= 13] . ( 23 sec) [ -27546.6695] [ 2342] [depth= 1] . ( 23 sec) [ -27426.5583] [ 2328] [depth= 8] . ( 23 sec) [ -27389.8408] [ 2318] [depth= 2] . ( 23 sec) [ -27378.8041] [ 2318] [depth= 1] . ( 23 sec) [ -27378.3702] [ 2318] [depth= 12] . ( 24 sec) [ -27365.7734] [ 2318] [depth= 2] . ( 24 sec) [ -27261.7787] [ 2291] [depth= 11] . ( 24 sec) [ -27055.2869] [ 2263] [depth= 8] . ( 24 sec) [ -26977.9615] [ 2263] [depth= 5] . ( 24 sec) [ -26977.8995] [ 2263] [depth= 7] . ( 24 sec) [ -26634.4404] [ 2232] [depth= 9] . ( 24 sec) [ -26605.7416] [ 2226] [depth= 5] . ( 24 sec) [ -26605.4501] [ 2226] [depth= 5] . ( 25 sec) [ -26454.0288] [ 2222] [depth= 7] . ( 25 sec) [ -25589.7911] [ 2222] [depth= 1] . ( 25 sec) [ -25540.3946] [ 2217] [depth= 1] . ( 25 sec) [ -25367.1652] [ 2192] [depth= 10] . ( 25 sec) [ -25225.2043] [ 2169] [depth= 1] . ( 25 sec) [ -25204.7085] [ 2169] [depth= 14] . ( 25 sec) [ -25117.9010] [ 2153] [depth= 9] . ( 25 sec) [ -24657.7179] [ 2152] [depth= 22] . ( 26 sec) [ -24657.4561] [ 2156] [depth= 1] . ( 26 sec) [ -24567.3077] [ 2152] [depth= 1] . ( 26 sec) [ -24481.2966] [ 2152] [depth= 6] . ( 26 sec) [ -24466.3143] [ 2152] [depth= 1] . ( 26 sec) [ -24460.8560] [ 2152] [depth= 29] . ( 26 sec) [ -24223.2530] [ 2142] [depth= 5] . ( 26 sec) [ -24220.1671] [ 2142] [depth= 1] . ( 26 sec) [ -23912.5476] [ 2133] [depth= 21] . ( 27 sec) [ -23795.3129] [ 2134] [depth= 30] . ( 27 sec) [ -23792.8270] [ 2134] [depth= 34] . ( 27 sec) [ -23585.0418] [ 2116] [depth= 14] . ( 27 sec) [ -23582.8213] [ 2116] [depth= 1] . ( 27 sec) [ -23483.9810] [ 2101] [depth= 6] . ( 27 sec) [ -23462.0119] [ 2097] [depth= 16] . ( 27 sec) [ -23449.0699] [ 2096] [depth= 26] . ( 27 sec) [ -23448.4431] [ 2096] [depth= 1] . ( 27 sec) [ -22999.9893] [ 2093] [depth= 11] . ( 28 sec) [ -22987.8148] [ 2093] [depth= 2] . ( 28 sec) [ -22687.8582] [ 2080] [depth= 2] . ( 28 sec) [ -22685.3707] [ 2080] [depth= 3] . ( 28 sec) [ -22315.8755] [ 2080] [depth= 5] . ( 28 sec) [ -22123.9037] [ 2070] [depth= 3] . ( 28 sec) [ -21978.0057] [ 2070] [depth= 4] . ( 28 sec) [ -21953.8744] [ 2070] [depth= 1] . ( 29 sec) [ -21924.4467] [ 2070] [depth= 1] . ( 29 sec) [ -21924.1161] [ 2072] [depth= 14] . ( 29 sec) [ -21881.6915] [ 2072] [depth= 2] . ( 29 sec) [ -21845.7336] [ 2072] [depth= 1] . ( 29 sec) [ -21840.2681] [ 2072] [depth= 3] . ( 29 sec) [ -21838.9235] [ 2072] [depth= 14] . ( 29 sec) [ -21809.1003] [ 2068] [depth= 4] . ( 29 sec) [ -21635.3573] [ 2055] [depth= 25] . ( 30 sec) [ -21635.2602] [ 2054] [depth= 2] . ( 30 sec) [ -21632.3001] [ 2054] [depth= 8] . ( 30 sec) [ -21506.1424] [ 2022] [depth= 3] . ( 30 sec) [ -21502.6520] [ 2022] [depth= 2] . ( 30 sec) [ -21402.0582] [ 2003] [depth= 23] . ( 30 sec) [ -21401.6217] [ 1979] [depth= 3] . ( 30 sec) [ -21399.9008] [ 1974] [depth= 4] . ( 30 sec) [ -20622.9375] [ 1949] [depth= 11] . ( 31 sec) [ -20586.6516] [ 1942] [depth= 22] . ( 31 sec) [ -20372.8741] [ 1942] [depth= 26] . ( 31 sec) [ -19801.3453] [ 1929] [depth= 20] . ( 31 sec) [ -19782.9092] [ 1929] [depth= 2] . ( 31 sec) [ -19317.0764] [ 1929] [depth= 21] . ( 31 sec) [ -19314.9006] [ 1929] [depth= 3] . ( 31 sec) [ -19228.6595] [ 1929] [depth= 1] . ( 31 sec) [ -19228.0283] [ 1929] [depth= 22] . ( 32 sec) [ -19207.1958] [ 1926] [depth= 4] . ( 32 sec) [ -19198.1814] [ 1926] [depth= 28] . ( 32 sec) [ -19191.4141] [ 1926] [depth= 18] . ( 32 sec) [ -18949.2216] [ 1926] [depth= 10] . ( 32 sec) [ -18945.3529] [ 1926] [depth= 23] . ( 32 sec) [ -18882.2969] [ 1925] [depth= 8] . ( 32 sec) [ -18872.8914] [ 1925] [depth= 1] . ( 33 sec) [ -18782.7719] [ 1901] [depth= 15] . ( 33 sec) [ -18782.0821] [ 1901] [depth= 8] . ( 33 sec) [ -18656.8618] [ 1880] [depth= 9] . ( 33 sec) [ -18598.1471] [ 1880] [depth= 1] . ( 33 sec) [ -18528.5461] [ 1856] [depth= 3] . ( 33 sec) [ -18456.3168] [ 1854] [depth= 19] . ( 33 sec) [ -18454.9205] [ 1854] [depth= 1] . ( 33 sec) [ -18453.8662] [ 1854] [depth= 1] . ( 34 sec) [ -18290.2628] [ 1854] [depth= 20] . ( 34 sec) [ -18279.1561] [ 1853] [depth= 3] . ( 34 sec) [ -18278.9813] [ 1853] [depth= 21] . ( 34 sec) [ -18236.4144] [ 1853] [depth= 15] . ( 34 sec) [ -18224.9947] [ 1853] [depth= 4] . ( 34 sec) [ -18043.4448] [ 1853] [depth= 8] . ( 34 sec) [ -18015.3240] [ 1851] [depth= 12] . ( 34 sec) [ -17970.2795] [ 1838] [depth= 11] . ( 35 sec) [ -17887.5290] [ 1837] [depth= 29] . ( 35 sec) [ -17866.8850] [ 1833] [depth= 16] . ( 35 sec) [ -17859.1310] [ 1831] [depth= 1] . ( 35 sec) [ -17847.7443] [ 1831] [depth= 22] . ( 35 sec) [ -17669.5461] [ 1823] [depth= 18] . ( 35 sec) [ -17665.3721] [ 1816] [depth= 3] . ( 35 sec) [ -17660.2045] [ 1815] [depth= 5] . ( 35 sec) [ -17650.0086] [ 1811] [depth= 4] . ( 36 sec) [ -17624.9104] [ 1811] [depth= 1] . ( 36 sec) [ -17569.3691] [ 1796] [depth= 1] . ( 36 sec) [ -16871.7428] [ 1796] [depth= 2] . ( 36 sec) [ -16630.9944] [ 1779] [depth= 32] . ( 36 sec) [ -16630.8637] [ 1779] [depth= 10] . ( 36 sec) [ -16551.2028] [ 1753] [depth= 7] . ( 36 sec) [ -16435.5894] [ 1734] [depth= 3] . ( 36 sec) [ -16169.7764] [ 1707] [depth= 25] . ( 37 sec) [ -16150.7289] [ 1707] [depth= 1] . ( 37 sec) [ -16133.7286] [ 1707] [depth= 26] . ( 37 sec) [ -16025.8167] [ 1707] [depth= 10] . ( 37 sec) [ -15943.7162] [ 1692] [depth= 21] . ( 37 sec) [ -15936.9014] [ 1691] [depth= 19] . ( 37 sec) [ -15914.9223] [ 1691] [depth= 4] . ( 37 sec) [ -15912.2034] [ 1691] [depth= 7] . ( 37 sec) [ -15850.1753] [ 1685] [depth= 5] . ( 38 sec) [ -15845.6140] [ 1684] [depth= 27] . ( 38 sec) [ -15815.9617] [ 1666] [depth= 2] . ( 38 sec) [ -15731.4026] [ 1665] [depth= 5] . ( 38 sec) [ -15611.4446] [ 1642] [depth= 5] . ( 38 sec) [ -15290.4497] [ 1643] [depth= 1] . ( 38 sec) [ -15024.8111] [ 1625] [depth= 2] . ( 38 sec) [ -14914.3018] [ 1604] [depth= 9] . ( 38 sec) [ -14904.8109] [ 1604] [depth= 1] . ( 38 sec) [ -14898.9155] [ 1604] [depth= 19] . ( 39 sec) [ -14891.6793] [ 1603] [depth= 20] . ( 39 sec) [ -14891.4847] [ 1603] [depth= 41] . ( 39 sec) [ -14884.5140] [ 1603] [depth= 16] . ( 39 sec) [ -14816.9383] [ 1592] [depth= 27] . ( 39 sec) [ -14785.5931] [ 1592] [depth= 2] . ( 39 sec) [ -14773.8230] [ 1592] [depth= 24] . ( 39 sec) [ -14766.6688] [ 1592] [depth= 1] . ( 39 sec) [ -14711.9574] [ 1583] [depth= 25] . ( 40 sec) [ -14703.5513] [ 1583] [depth= 3] . ( 40 sec) [ -14700.5751] [ 1583] [depth= 10] . ( 40 sec) [ -14631.9597] [ 1574] [depth= 28] . ( 40 sec) [ -14629.9899] [ 1574] [depth= 24] . ( 40 sec) [ -14521.7733] [ 1557] [depth= 17] . ( 40 sec) [ -14521.4319] [ 1557] [depth= 25] . ( 40 sec) [ -14455.1426] [ 1557] [depth= 21] . ( 40 sec) [ -14432.7401] [ 1553] [depth= 5] . ( 41 sec) [ -14414.5985] [ 1553] [depth= 2] . ( 41 sec) [ -14414.3202] [ 1553] [depth= 3] . ( 41 sec) [ -14046.1675] [ 1553] [depth= 7] . ( 41 sec) [ -14046.1395] [ 1553] [depth= 3] . ( 41 sec) [ -14045.8135] [ 1553] [depth= 2] . ( 41 sec) [ -14043.4470] [ 1553] [depth= 6] . ( 41 sec) [ -14029.2324] [ 1551] [depth= 1] . ( 41 sec) [ -13837.6319] [ 1549] [depth= 23] . ( 42 sec) [ -13837.5045] [ 1549] [depth= 3] . ( 42 sec) [ -13830.4375] [ 1551] [depth= 8] . ( 42 sec) [ -13724.9172] [ 1531] [depth= 9] . ( 42 sec) [ -13698.8131] [ 1531] [depth= 1] . ( 42 sec) [ -13698.5928] [ 1531] [depth= 2] . ( 42 sec) [ -13688.7566] [ 1531] [depth= 1] . ( 42 sec) [ -13683.5681] [ 1531] [depth= 1] . ( 43 sec) [ -13682.3746] [ 1531] [depth= 1] . ( 43 sec) [ -13677.3322] [ 1531] [depth= 2] . ( 43 sec) [ -13676.7574] [ 1531] [depth= 9] . ( 43 sec) [ -13675.1019] [ 1531] [depth= 1] . ( 43 sec) [ -13670.2734] [ 1531] [depth= 3] . ( 43 sec) [ -13668.6257] [ 1531] [depth= 2] . ( 43 sec) [ -13647.6345] [ 1531] [depth= 24] . ( 43 sec) [ -13465.7702] [ 1483] [depth= 15] . ( 44 sec) [ -13465.7379] [ 1483] [depth= 1] . ( 44 sec) [ -13465.7179] [ 1483] [depth= 1] . ( 44 sec) [ -13465.6215] [ 1483] [depth= 11] . ( 44 sec) [ -13464.3925] [ 1483] [depth= 25] . ( 44 sec) [ -13463.1811] [ 1483] [depth= 4] . ( 44 sec) [ -13460.7456] [ 1483] [depth= 12] . ( 44 sec) [ -13460.0967] [ 1483] [depth= 1] . ( 44 sec) [ -13244.2350] [ 1462] [depth= 7] . ( 44 sec) [ -13160.0010] [ 1453] [depth= 1] . ( 45 sec) [ -13091.0355] [ 1447] [depth= 16] . ( 45 sec) [ -13084.1727] [ 1441] [depth= 9] . ( 45 sec) [ -13068.6979] [ 1441] [depth= 1] . ( 45 sec) [ -13016.0868] [ 1438] [depth= 20] . ( 45 sec) [ -12822.2053] [ 1438] [depth= 1] . ( 45 sec) [ -12820.3728] [ 1438] [depth= 22] . ( 45 sec) [ -12816.0105] [ 1438] [depth= 2] . ( 45 sec) [ -12809.9307] [ 1438] [depth= 8] . ( 46 sec) [ -12759.0622] [ 1412] [depth= 5] . ( 46 sec) [ -12751.9468] [ 1413] [depth= 3] . ( 46 sec) [ -12511.8124] [ 1408] [depth= 5] . ( 46 sec) [ -12459.1164] [ 1399] [depth= 3] . ( 46 sec) [ -12459.0484] [ 1399] [depth= 24] . ( 46 sec) [ -12452.9946] [ 1399] [depth= 11] . ( 46 sec) [ -12452.7251] [ 1399] [depth= 18] . ( 46 sec) [ -12406.4919] [ 1385] [depth= 22] . ( 47 sec) [ -12404.2994] [ 1385] [depth= 4] . ( 47 sec) [ -12289.4472] [ 1370] [depth= 10] . ( 47 sec) [ -12268.7815] [ 1367] [depth= 4] . ( 47 sec) [ -12141.8135] [ 1367] [depth= 1] . ( 47 sec) [ -12124.6002] [ 1352] [depth= 4] . ( 47 sec) [ -10190.6804] [ 1352] [depth= 8] . ( 47 sec) [ -10156.7270] [ 1342] [depth= 7] . ( 47 sec) [ -10156.6233] [ 1342] [depth= 11] . ( 48 sec) [ -10116.4470] [ 1342] [depth= 11] . ( 48 sec) [ -10114.3718] [ 1342] [depth= 9] . ( 48 sec) [ -10027.1768] [ 1342] [depth= 3] . ( 48 sec) [ -9867.5171] [ 1343] [depth= 3] . ( 48 sec) [ -9856.8180] [ 1343] [depth= 24] . ( 48 sec) [ -9722.4668] [ 1341] [depth= 13] . ( 48 sec) [ -9678.9604] [ 1329] [depth= 6] . ( 48 sec) [ -9620.5276] [ 1316] [depth= 16] . ( 49 sec) [ -9620.2464] [ 1316] [depth= 9] . ( 49 sec) [ -9619.4997] [ 1316] [depth= 7] . ( 49 sec) [ -9555.0457] [ 1309] [depth= 3] . ( 49 sec) [ -9293.2163] [ 1309] [depth= 2] . ( 49 sec) [ -9150.9779] [ 1285] [depth= 11] . ( 49 sec) [ -9150.9118] [ 1285] [depth= 13] . ( 49 sec) [ -9124.3430] [ 1284] [depth= 5] . ( 49 sec) [ -9124.0749] [ 1284] [depth= 5] . ( 50 sec) [ -9077.0600] [ 1281] [depth= 13] . ( 50 sec) [ -9075.0651] [ 1281] [depth= 1] . ( 50 sec) [ -9068.6630] [ 1281] [depth= 3] . ( 50 sec) [ -9063.3522] [ 1281] [depth= 3] . ( 50 sec) [ -9013.1277] [ 1272] [depth= 7] . ( 50 sec) [ -8938.7039] [ 1261] [depth= 14] . ( 50 sec) [ -8937.0727] [ 1261] [depth= 6] . ( 50 sec) [ -8888.0051] [ 1258] [depth= 12] . ( 50 sec) [ -8882.4400] [ 1258] [depth= 6] . ( 51 sec) [ -8849.2963] [ 1237] [depth= 13] . ( 51 sec) [ -8822.1498] [ 1237] [depth= 7] . ( 51 sec) [ -8652.1886] [ 1225] [depth= 16] . ( 51 sec) [ -8651.8377] [ 1225] [depth= 28] . ( 51 sec) [ -8649.8238] [ 1208] [depth= 15] . ( 51 sec) [ -8598.3687] [ 1208] [depth= 1] . ( 51 sec) [ -8588.7138] [ 1211] [depth= 1] . ( 51 sec) [ -8546.4299] [ 1208] [depth= 13] . ( 52 sec) [ -8546.4003] [ 1208] [depth= 9] . ( 52 sec) [ -8527.8549] [ 1195] [depth= 4] . ( 52 sec) [ -8453.4825] [ 1181] [depth= 23] . ( 52 sec) [ -8452.8577] [ 1181] [depth= 2] . ( 52 sec) [ -8089.4996] [ 1172] [depth= 11] . ( 52 sec) [ -8086.4891] [ 1172] [depth= 2] . ( 52 sec) [ -8085.5275] [ 1172] [depth= 6] . ( 53 sec) [ -8083.1673] [ 1172] [depth= 14] . ( 53 sec) [ -8082.6163] [ 1172] [depth= 4] . ( 53 sec) [ -8076.3551] [ 1172] [depth= 1] . ( 53 sec) [ -7938.6272] [ 1135] [depth= 8] . ( 53 sec) [ -7937.1430] [ 1135] [depth= 1] . ( 53 sec) [ -7878.9042] [ 1135] [depth= 11] . ( 53 sec) [ -7878.7223] [ 1135] [depth= 3] . ( 53 sec) [ -7785.0970] [ 1112] [depth= 16] . ( 54 sec) [ -7785.0713] [ 1112] [depth= 4] . ( 54 sec) [ -7705.6802] [ 1100] [depth= 13] . ( 54 sec) [ -7693.7113] [ 1100] [depth= 1] . ( 54 sec) [ -7693.4847] [ 1100] [depth= 16] . ( 54 sec) [ -7693.1773] [ 1100] [depth= 2] . ( 54 sec) [ -7692.7947] [ 1100] [depth= 10] . ( 54 sec) [ -7666.8720] [ 1097] [depth= 3] . ( 54 sec) [ -7598.8579] [ 1100] [depth= 16] . ( 55 sec) [ -7591.5924] [ 1099] [depth= 5] . ( 55 sec) [ -7584.3486] [ 1098] [depth= 31] . ( 55 sec) [ -7584.1773] [ 1098] [depth= 3] . ( 55 sec) [ -7519.9094] [ 1098] [depth= 6] . ( 55 sec) [ -7463.1716] [ 1098] [depth= 2] . ( 55 sec) [ -7462.4565] [ 1099] [depth= 4] . ( 55 sec) [ -7360.4265] [ 1077] [depth= 11] . ( 55 sec) [ -7288.1673] [ 1062] [depth= 20] . ( 55 sec) [ -7190.3977] [ 1062] [depth= 1] . ( 56 sec) [ -7189.5092] [ 1062] [depth= 6] . ( 56 sec) [ -7189.4327] [ 1062] [depth= 3] . ( 56 sec) [ -7185.0907] [ 1062] [depth= 18] . ( 56 sec) [ -6897.2503] [ 1062] [depth= 7] . ( 56 sec) [ -6896.2071] [ 1051] [depth= 12] . ( 56 sec) [ -6895.7634] [ 1051] [depth= 24] . ( 56 sec) [ -6881.1333] [ 1049] [depth= 24] . ( 57 sec) [ -6875.2488] [ 1049] [depth= 3] . ( 57 sec) [ -6874.5890] [ 1049] [depth= 3] . ( 57 sec) [ -6872.6926] [ 1049] [depth= 1] . ( 57 sec) [ -6847.3568] [ 1046] [depth= 1] . ( 57 sec) [ -6845.2624] [ 1046] [depth= 16] . ( 57 sec) [ -6783.8013] [ 1033] [depth= 6] . ( 57 sec) [ -6711.8466] [ 1033] [depth= 2] . ( 57 sec) [ -6643.2801] [ 1029] [depth= 10] . ( 58 sec) [ -6622.3136] [ 1020] [depth= 14] . ( 58 sec) [ -6621.2159] [ 1020] [depth= 2] . ( 58 sec) [ -6525.0249] [ 1016] [depth= 25] . ( 58 sec) [ -6521.3271] [ 1016] [depth= 1] . ( 58 sec) [ -6519.5476] [ 1016] [depth= 2] . ( 58 sec) [ -6510.0299] [ 1015] [depth= 1] . ( 58 sec) [ -6459.9751] [ 994] [depth= 10] . ( 58 sec) [ -6459.9406] [ 994] [depth= 4] . ( 58 sec) [ -6446.5497] [ 994] [depth= 1] . ( 59 sec) [ -6446.1080] [ 994] [depth= 9] . ( 59 sec) [ -6445.1257] [ 994] [depth= 1] . ( 59 sec) [ -6444.8899] [ 994] [depth= 14] . ( 59 sec) [ -6411.6864] [ 990] [depth= 2] . ( 59 sec) [ -6410.7297] [ 990] [depth= 1] . ( 59 sec) [ -6409.2634] [ 990] [depth= 5] . ( 59 sec) [ -6408.4255] [ 990] [depth= 14] . ( 59 sec) [ -6404.0699] [ 990] [depth= 15] . ( 60 sec) [ -6403.8682] [ 990] [depth= 1] . ( 60 sec) [ -6403.8092] [ 990] [depth= 16] . ( 60 sec) [ -6353.6191] [ 986] [depth= 3] . ( 60 sec) [ -6351.9062] [ 987] [depth= 1] . ( 60 sec) [ -6351.8920] [ 987] [depth= 16] . ( 60 sec) [ -6349.8978] [ 987] [depth= 22] . ( 60 sec) [ -6343.5752] [ 981] [depth= 8] . ( 60 sec) [ -6339.1542] [ 981] [depth= 4] . ( 61 sec) [ -6335.4089] [ 982] [depth= 2] . ( 61 sec) [ -6333.8181] [ 982] [depth= 1] . ( 61 sec) [ -6333.3251] [ 982] [depth= 31] . ( 61 sec) [ -6318.7949] [ 982] [depth= 2] . ( 61 sec) [ -6169.1824] [ 945] [depth= 6] . ( 62 sec) [ -6154.9950] [ 941] [depth= 3] . ( 62 sec) [ -6153.1996] [ 941] [depth= 16] . ( 62 sec) [ -6145.4341] [ 941] [depth= 2] . ( 62 sec) [ -6099.0405] [ 929] [depth= 21] . ( 62 sec) [ -6096.7775] [ 928] [depth= 1] . ( 62 sec) [ -6095.1753] [ 928] [depth= 9] . ( 62 sec) [ -6083.4380] [ 925] [depth= 2] . ( 62 sec) [ -6083.4001] [ 925] [depth= 2] . ( 63 sec) [ -6061.0447] [ 912] [depth= 18] . ( 63 sec) [ -6037.9184] [ 911] [depth= 1] . ( 63 sec) [ -6025.1868] [ 911] [depth= 17] . ( 63 sec) [ -6019.8286] [ 911] [depth= 2] . ( 63 sec) [ -6018.4192] [ 912] [depth= 2] . ( 63 sec) [ -6017.9544] [ 912] [depth= 3] . ( 64 sec) [ -6017.8358] [ 912] [depth= 1] . ( 64 sec) [ -6008.5112] [ 914] [depth= 1] . ( 64 sec) [ -5988.0358] [ 912] [depth= 11] . ( 64 sec) [ -5988.0251] [ 912] [depth= 31] . ( 65 sec) [ -5972.8489] [ 901] [depth= 4] . ( 65 sec) [ -5932.8165] [ 889] [depth= 15] . ( 65 sec) [ -5932.5293] [ 889] [depth= 12] . ( 65 sec) [ -5930.8612] [ 893] [depth= 1] . ( 65 sec) [ -5930.7950] [ 893] [depth= 9] . ( 65 sec) [ -5844.5937] [ 870] [depth= 21] . ( 65 sec) [ -5844.3654] [ 870] [depth= 1] . ( 66 sec) [ -5843.7064] [ 870] [depth= 13] . ( 66 sec) [ -5842.2527] [ 870] [depth= 4] . ( 66 sec) [ -5762.2359] [ 850] [depth= 7] . ( 66 sec) [ -5762.1703] [ 850] [depth= 4] . ( 66 sec) [ -5759.0161] [ 850] [depth= 1] . ( 67 sec) [ -5758.9934] [ 850] [depth= 4] . ( 67 sec) [ -5753.7621] [ 850] [depth= 2] . ( 68 sec) [ -5582.3319] [Branch lengths ] . ( 71 sec) [ -5557.1387] [GTR parameters ] . ( 71 sec) [ -5437.2496] [Alpha ][ 0.250961] . ( 72 sec) [ -5437.1994] [ 850] [depth= 10] . ( 72 sec) [ -5406.4514] [ 850] [depth= 5] . ( 72 sec) [ -5403.9808] [ 849] [depth= 1] . ( 72 sec) [ -5366.5357] [ 826] [depth= 4] . ( 72 sec) [ -5293.8888] [ 803] [depth= 20] . ( 73 sec) [ -5290.2356] [ 801] [depth= 3] . ( 73 sec) [ -5281.3899] [ 800] [depth= 13] . ( 73 sec) [ -5271.3291] [ 794] [depth= 16] . ( 74 sec) [ -5263.1066] [ 788] [depth= 22] . ( 74 sec) [ -5263.0957] [ 788] [depth= 8] . ( 74 sec) [ -5247.4202] [ 781] [depth= 3] . ( 75 sec) [ -5246.7565] [ 781] [depth= 7] . ( 76 sec) [ -5237.8659] [ 781] [depth= 11] . ( 76 sec) [ -5237.8230] [ 781] [depth= 3] . ( 76 sec) [ -5237.3524] [ 780] [depth= 7] . ( 76 sec) [ -5237.3393] [ 780] [depth= 4] . ( 76 sec) [ -5237.1271] [ 780] [depth= 4] . ( 78 sec) [ -5128.6268] [ 739] [depth= 18] . ( 78 sec) [ -5121.8853] [ 738] [depth= 1] . ( 78 sec) [ -5121.5488] [ 738] [depth= 11] . ( 79 sec) [ -5117.1569] [ 733] [depth= 11] . ( 79 sec) [ -5062.3982] [ 716] [depth= 16] . ( 80 sec) [ -5041.6008] [ 716] [depth= 17] . ( 81 sec) [ -5036.3266] [ 716] [depth= 10] . ( 81 sec) [ -5036.2202] [ 716] [depth= 2] . ( 81 sec) [ -5036.2079] [ 716] [depth= 10] . ( 81 sec) [ -4982.4851] [ 696] [depth= 6] . ( 81 sec) [ -4968.6828] [ 695] [depth= 41] . ( 82 sec) [ -4968.1955] [ 695] [depth= 10] . ( 83 sec) [ -4951.2595] [ 693] [depth= 16] . ( 83 sec) [ -4951.2133] [ 693] [depth= 17] . ( 83 sec) [ -4946.0153] [ 693] [depth= 24] . ( 83 sec) [ -4904.2644] [ 685] [depth= 21] . ( 83 sec) [ -4903.5278] [ 685] [depth= 14] . ( 85 sec) [ -4903.5019] [ 685] [depth= 5] . ( 85 sec) [ -4902.9427] [ 684] [depth= 5] . ( 85 sec) [ -4898.9036] [ 684] [depth= 3] . ( 85 sec) [ -4898.8646] [ 684] [depth= 15] . ( 85 sec) [ -4898.5295] [ 684] [depth= 12] . ( 86 sec) [ -4886.5850] [ 683] [depth= 17] . ( 86 sec) [ -4886.2511] [ 683] [depth= 10] . ( 86 sec) [ -4886.2129] [ 678] [depth= 1] . ( 86 sec) [ -4886.0611] [ 678] [depth= 14] . ( 86 sec) [ -4882.1338] [ 673] [depth= 18] . ( 87 sec) [ -4878.1140] [ 673] [depth= 5] . ( 87 sec) [ -4877.1643] [ 673] [depth= 14] . ( 87 sec) [ -4848.4667] [ 657] [depth= 17] . ( 87 sec) [ -4790.3664] [ 641] [depth= 7] . ( 87 sec) [ -4790.3550] [ 641] [depth= 1] . ( 87 sec) [ -4789.6572] [ 641] [depth= 5] . ( 88 sec) [ -4789.5508] [ 641] [depth= 2] . ( 88 sec) [ -4789.4663] [ 641] [depth= 19] . ( 88 sec) [ -4788.9988] [ 641] [depth= 15] . ( 88 sec) [ -4775.9717] [ 641] [depth= 18] . ( 88 sec) [ -4775.7602] [ 641] [depth= 18] . ( 89 sec) [ -4772.9876] [ 643] [depth= 11] . ( 89 sec) [ -4693.8848] [ 623] [depth= 43] . ( 89 sec) [ -4673.9594] [ 622] [depth= 1] . ( 90 sec) [ -4673.9364] [ 622] [depth= 21] . ( 90 sec) [ -4673.8262] [ 622] [depth= 7] . ( 90 sec) [ -4673.8154] [ 622] [depth= 2] . ( 90 sec) [ -4669.4634] [ 621] [depth= 1] . ( 91 sec) [ -4669.3724] [ 621] [depth= 3] . ( 91 sec) [ -4668.4219] [ 620] [depth= 1] . ( 91 sec) [ -4668.3068] [ 620] [depth= 2] . ( 91 sec) [ -4668.2890] [ 620] [depth= 13] . ( 91 sec) [ -4668.2670] [ 620] [depth= 2] . ( 91 sec) [ -4619.9136] [ 594] [depth= 39] . ( 92 sec) [ -4611.7067] [ 594] [depth= 9] . ( 92 sec) [ -4610.9473] [ 594] [depth= 37] . ( 92 sec) [ -4609.9755] [ 594] [depth= 8] . ( 92 sec) [ -4609.8495] [ 594] [depth= 13] . ( 92 sec) [ -4609.8322] [ 594] [depth= 14] . ( 92 sec) [ -4609.8092] [ 594] [depth= 3] . ( 94 sec) [ -4609.7668] [ 594] [depth= 2] . ( 94 sec) [ -4609.4979] [ 594] [depth= 7] . ( 94 sec) [ -4609.4726] [ 594] [depth= 4] . ( 95 sec) [ -4602.1080] [ 593] [depth= 19] . ( 95 sec) [ -4594.8101] [ 592] [depth= 2] . ( 96 sec) [ -4594.7713] [ 592] [depth= 2] . ( 96 sec) [ -4594.7418] [ 592] [depth= 1] . ( 96 sec) [ -4594.2210] [ 592] [depth= 1] . ( 96 sec) [ -4594.1532] [ 592] [depth= 3] . ( 97 sec) [ -4593.9588] [ 592] [depth= 7] . ( 97 sec) [ -4593.9436] [ 592] [depth= 2] . ( 98 sec) [ -4593.9080] [ 592] [depth= 6] . ( 98 sec) [ -4593.8939] [ 592] [depth= 3] . ( 98 sec) [ -4593.3201] [ 592] [depth= 17] . ( 99 sec) [ -4593.0941] [ 592] [depth= 4] . ( 99 sec) [ -4588.8740] [ 592] [depth= 13] . ( 99 sec) [ -4588.8534] [ 592] [depth= 34] . ( 99 sec) [ -4588.6808] [ 592] [depth= 2] . ( 99 sec) [ -4588.6595] [ 592] [depth= 7] . ( 100 sec) [ -4588.6489] [ 592] [depth= 1] . ( 100 sec) [ -4588.5613] [ 592] [depth= 6] . ( 100 sec) [ -4588.5423] [ 592] [depth= 8] . ( 100 sec) [ -4588.5094] [ 592] [depth= 3] . ( 101 sec) [ -4584.9753] [ 591] [depth= 22] . ( 101 sec) [ -4582.1948] [ 591] [depth= 12] . ( 102 sec) [ -4581.5896] [ 592] [depth= 1] . ( 102 sec) [ -4578.0869] [ 590] [depth= 16] . ( 104 sec) [ -4577.8074] [ 590] [depth= 5] . ( 104 sec) [ -4481.2633] [ 589] [depth= 38] . ( 104 sec) [ -4472.3435] [ 588] [depth= 3] . ( 104 sec) [ -4472.3323] [ 588] [depth= 2] . ( 104 sec) [ -4469.4297] [ 586] [depth= 1] . ( 106 sec) [ -4468.4299] [ 586] [depth= 9] . ( 106 sec) [ -4465.5770] [ 586] [depth= 1] . ( 106 sec) [ -4465.2179] [ 586] [depth= 6] . ( 106 sec) [ -4465.1950] [ 586] [depth= 6] . ( 106 sec) [ -4465.1096] [ 586] [depth= 26] . ( 106 sec) [ -4464.2867] [ 586] [depth= 8] . ( 107 sec) [ -4463.9382] [ 586] [depth= 11] . ( 108 sec) [ -4463.9053] [ 586] [depth= 5] . ( 108 sec) [ -4463.8945] [ 586] [depth= 2] . ( 109 sec) [ -4463.8603] [ 586] [depth= 4] . ( 110 sec) [ -4463.7695] [ 586] [depth= 46] . ( 110 sec) [ -4463.6664] [ 586] [depth= 24] . ( 110 sec) [ -4456.8427] [ 585] [depth= 5] . ( 111 sec) [ -4456.6749] [ 585] [depth= 7] . ( 112 sec) [ -4456.2449] [ 585] [depth= 1] . ( 112 sec) [ -4456.2277] [ 585] [depth= 4] . ( 113 sec) [ -4454.8986] [ 585] [depth= 3] . ( 114 sec) [ -4453.6811] [ 585] [depth= 1] . ( 114 sec) [ -4453.6280] [ 585] [depth= 3] . ( 114 sec) [ -4453.6036] [ 585] [depth= 4] . ( 114 sec) [ -4453.5123] [ 585] [depth= 20] . ( 115 sec) [ -4453.4135] [ 585] [depth= 67] . ( 116 sec) [ -4447.1376] [ 583] [depth= 4] . ( 118 sec) [ -4447.0198] [ 583] [depth= 1] . ( 118 sec) [ -4446.8810] [ 583] [depth= 4] . ( 118 sec) [ -4446.8704] [ 583] [depth= 4] . ( 119 sec) [ -4412.2551] [ 577] [depth= 34] . ( 119 sec) [ -4410.5815] [ 577] [depth= 1] . ( 119 sec) [ -4410.5034] [ 577] [depth= 5] . ( 119 sec) [ -4410.4406] [ 577] [depth= 11] . ( 120 sec) [ -4408.6998] [ 577] [depth= 3] . ( 120 sec) [ -4408.4543] [ 577] [depth= 2] . ( 120 sec) [ -4387.0977] [ 561] [depth= 2] . ( 121 sec) [ -4386.8987] [ 561] [depth= 1] . ( 121 sec) [ -4386.4872] [ 561] [depth= 44] . ( 121 sec) [ -4356.1525] [ 553] [depth= 6] . ( 121 sec) [ -4338.2135] [ 547] [depth= 33] . ( 121 sec) [ -4338.1921] [ 547] [depth= 19] . ( 121 sec) [ -4338.1726] [ 547] [depth= 5] . ( 122 sec) [ -4326.0654] [ 547] [depth= 11] . ( 122 sec) [ -4311.2058] [ 542] [depth= 5] . ( 122 sec) [ -4311.0286] [ 542] [depth= 5] . ( 122 sec) [ -4311.0173] [ 542] [depth= 1] . ( 122 sec) [ -4310.2284] [ 542] [depth= 14] . ( 122 sec) [ -4309.4857] [ 542] [depth= 11] . ( 124 sec) [ -4305.7634] [ 540] [depth= 2] . ( 125 sec) [ -4305.4503] [ 540] [depth= 3] . ( 125 sec) [ -4305.4392] [ 540] [depth= 9] . ( 127 sec) [ -4305.4123] [ 540] [depth= 2] . ( 128 sec) [ -4301.9762] [ 540] [depth= 15] . ( 128 sec) [ -4301.8810] [ 540] [depth= 11] . ( 128 sec) [ -4300.7916] [ 540] [depth= 7] . ( 128 sec) [ -4299.7849] [ 540] [depth= 7] . ( 129 sec) [ -4299.2557] [ 540] [depth= 1] . ( 129 sec) [ -4299.1900] [ 540] [depth= 2] . ( 130 sec) [ -4299.1150] [ 540] [depth= 3] . ( 130 sec) [ -4287.2727] [ 538] [depth= 7] . ( 130 sec) [ -4280.4322] [ 537] [depth= 2] . ( 130 sec) [ -4273.9821] [ 536] [depth= 3] . ( 130 sec) [ -4273.7375] [ 536] [depth= 8] . ( 130 sec) [ -4273.7032] [ 536] [depth= 14] . ( 130 sec) [ -4273.6381] [ 536] [depth= 3] . ( 130 sec) [ -4273.6169] [ 536] [depth= 1] . ( 131 sec) [ -4273.4666] [ 536] [depth= 1] . ( 132 sec) [ -4273.4553] [ 536] [depth= 4] . ( 134 sec) [ -4273.4440] [ 536] [depth= 1] . ( 134 sec) [ -4273.3734] [ 536] [depth= 7] . ( 135 sec) [ -4272.5019] [ 536] [depth= 26] . ( 135 sec) [ -4272.2828] [ 536] [depth= 3] . ( 136 sec) [ -4272.2727] [ 536] [depth= 2] . ( 136 sec) [ -4272.2031] [ 536] [depth= 8] . ( 136 sec) [ -4272.1572] [ 536] [depth= 3] . ( 136 sec) [ -4264.3824] [ 534] [depth= 22] . ( 136 sec) [ -4264.3644] [ 534] [depth= 4] . ( 137 sec) [ -4262.6043] [ 533] [depth= 1] . ( 138 sec) [ -4262.4524] [ 533] [depth= 15] . ( 138 sec) [ -4225.2973] [ 519] [depth= 6] . ( 138 sec) [ -4225.0464] [ 519] [depth= 7] . ( 138 sec) [ -4225.0338] [ 519] [depth= 8] . ( 138 sec) [ -4225.0230] [ 519] [depth= 8] . ( 142 sec) [ -4224.9372] [ 519] [depth= 2] . ( 145 sec) [ -4224.8938] [ 519] [depth= 6] . ( 146 sec) [ -4224.8816] [ 519] [depth= 4] . ( 146 sec) [ -4224.8334] [ 519] [depth= 6] . ( 148 sec) [ -4224.7214] [ 519] [depth= 1] . ( 148 sec) [ -4224.6942] [ 519] [depth= 1] . ( 150 sec) [ -4224.6284] [ 519] [depth= 1] . ( 150 sec) [ -4224.6167] [ 519] [depth= 10] . ( 150 sec) [ -4221.4913] [ 519] [depth= 7] . ( 151 sec) [ -4221.3796] [ 519] [depth= 2] . ( 151 sec) [ -4219.1971] [ 519] [depth= 5] . ( 151 sec) [ -4219.0977] [ 519] [depth= 7] . ( 151 sec) [ -4219.0182] [ 519] [depth= 3] . ( 155 sec) [ -4218.7823] [ 519] [depth= 7] . ( 155 sec) [ -4218.6989] [ 519] [depth= 6] . ( 155 sec) [ -4212.0720] [ 518] [depth= 6] . ( 155 sec) [ -4212.0460] [ 518] [depth= 1] . ( 155 sec) [ -4212.0275] [ 518] [depth= 5] . ( 155 sec) [ -4211.7234] [ 518] [depth= 4] . ( 156 sec) [ -4211.6045] [ 518] [depth= 2] . ( 156 sec) [ -4209.8654] [ 518] [depth= 21] . ( 157 sec) [ -4209.8456] [ 518] [depth= 4] . ( 157 sec) [ -4209.8192] [ 518] [depth= 1] . ( 158 sec) [ -4209.4765] [ 518] [depth= 10] . ( 158 sec) [ -4207.9898] [ 518] [depth= 6] . ( 158 sec) [ -4207.5864] [ 518] [depth= 1] . ( 158 sec) [ -4207.5599] [ 518] [depth= 5] . ( 158 sec) [ -4206.5387] [ 518] [depth= 1] . ( 158 sec) [ -4206.4184] [ 518] [depth= 1] . ( 158 sec) [ -4193.1750] [ 510] [depth= 22] . ( 159 sec) [ -4139.8284] [ 505] [depth= 1] . ( 159 sec) [ -4076.3288] [ 493] [depth= 20] . ( 159 sec) [ -4074.9777] [ 493] [depth= 11] . ( 159 sec) [ -4074.9590] [ 493] [depth= 9] . ( 159 sec) [ -4037.8686] [ 480] [depth= 11] . ( 159 sec) [ -4035.1981] [ 480] [depth= 1] . ( 160 sec) [ -4035.1692] [ 480] [depth= 6] . ( 160 sec) [ -4017.2783] [ 470] [depth= 8] . ( 160 sec) [ -4017.2515] [ 470] [depth= 2] . ( 161 sec) [ -4017.2166] [ 470] [depth= 1] . ( 162 sec) [ -4010.2871] [ 469] [depth= 17] . ( 162 sec) [ -4010.2612] [ 469] [depth= 3] . ( 163 sec) [ -4010.2414] [ 469] [depth= 1] . ( 165 sec) [ -4008.5894] [ 469] [depth= 12] . ( 165 sec) [ -4008.5233] [ 469] [depth= 6] . ( 165 sec) [ -4007.8149] [ 469] [depth= 4] . ( 166 sec) [ -4005.5540] [ 469] [depth= 3] . ( 166 sec) [ -4005.5111] [ 469] [depth= 2] . ( 166 sec) [ -4004.5808] [ 469] [depth= 12] . ( 167 sec) [ -4004.5393] [ 469] [depth= 2] . ( 169 sec) [ -4004.2704] [ 469] [depth= 5] . ( 169 sec) [ -4004.2426] [ 469] [depth= 4] . ( 169 sec) [ -4004.2142] [ 469] [depth= 2] . ( 171 sec) [ -4004.1826] [ 469] [depth= 10] . ( 171 sec) [ -3983.5231] [ 465] [depth= 2] . ( 171 sec) [ -3952.3123] [ 459] [depth= 5] . ( 172 sec) [ -3951.8435] [ 459] [depth= 3] . ( 172 sec) [ -3951.7456] [ 459] [depth= 3] . ( 172 sec) [ -3951.6571] [ 459] [depth= 2] . ( 173 sec) [ -3951.6362] [ 459] [depth= 3] . ( 173 sec) [ -3934.3696] [ 456] [depth= 24] . ( 174 sec) [ -3931.6063] [ 456] [depth= 1] . ( 174 sec) [ -3931.1883] [ 456] [depth= 10] . ( 174 sec) [ -3931.1038] [ 456] [depth= 3] . ( 174 sec) [ -3924.7356] [ 454] [depth= 11] . ( 174 sec) [ -3924.7115] [ 454] [depth= 4] . ( 175 sec) [ -3924.6985] [ 454] [depth= 1] . ( 175 sec) [ -3924.6830] [ 454] [depth= 6] . ( 176 sec) [ -3923.2612] [ 454] [depth= 11] . ( 178 sec) [ -3923.2366] [ 454] [depth= 3] . ( 178 sec) [ -3923.2197] [ 454] [depth= 8] . ( 178 sec) [ -3923.2090] [ 454] [depth= 12] . ( 179 sec) [ -3923.1368] [ 454] [depth= 2] . ( 180 sec) [ -3923.1151] [ 454] [depth= 2] . ( 180 sec) [ -3919.3463] [ 453] [depth= 2] . ( 180 sec) [ -3919.3271] [ 453] [depth= 2] . ( 181 sec) [ -3919.3128] [ 453] [depth= 4] . ( 182 sec) [ -3919.2855] [ 453] [depth= 6] . ( 184 sec) [ -3918.8268] [ 452] [depth= 2] . ( 184 sec) [ -3918.8158] [ 452] [depth= 2] . ( 184 sec) [ -3918.7282] [ 452] [depth= 2] . ( 185 sec) [ -3918.7027] [ 452] [depth= 15] . ( 186 sec) [ -3918.6905] [ 452] [depth= 4] . ( 186 sec) [ -3918.6739] [ 452] [depth= 6] . ( 187 sec) [ -3918.5819] [ 452] [depth= 2] . ( 187 sec) [ -3918.5095] [ 452] [depth= 9] . ( 188 sec) [ -3918.3603] [ 452] [depth= 2] . ( 188 sec) [ -3894.7629] [ 443] [depth= 1] . ( 188 sec) [ -3877.8828] [ 438] [depth= 1] . ( 188 sec) [ -3875.7569] [ 434] [depth= 1] . ( 189 sec) [ -3874.1637] [ 436] [depth= 2] . ( 190 sec) [ -3873.8458] [ 436] [depth= 2] . ( 190 sec) [ -3873.8125] [ 436] [depth= 3] . ( 190 sec) [ -3873.7970] [ 436] [depth= 1] . ( 190 sec) [ -3873.7711] [ 436] [depth= 14] . ( 190 sec) [ -3873.7485] [ 436] [depth= 11] . ( 191 sec) [ -3853.1415] [ 436] [depth= 4] . ( 191 sec) [ -3849.5399] [ 436] [depth= 2] . ( 191 sec) [ -3849.4731] [ 436] [depth= 12] . ( 191 sec) [ -3848.6419] [ 436] [depth= 1] . ( 191 sec) [ -3847.5435] [ 436] [depth= 1] . ( 192 sec) [ -3845.9698] [ 436] [depth= 2] . ( 192 sec) [ -3845.8882] [ 436] [depth= 16] . ( 192 sec) [ -3845.8366] [ 436] [depth= 4] . ( 193 sec) [ -3845.1736] [ 436] [depth= 11] . ( 194 sec) [ -3845.1259] [ 436] [depth= 14] . ( 195 sec) [ -3841.3853] [ 435] [depth= 37] . ( 195 sec) [ -3841.3739] [ 435] [depth= 1] . ( 195 sec) [ -3804.8736] [ 429] [depth= 5] . ( 195 sec) [ -3804.8607] [ 429] [depth= 3] . ( 197 sec) [ -3773.7875] [Branch lengths ] . ( 199 sec) [ -3771.0882] [GTR parameters ] . ( 199 sec) [ -3767.9761] [Alpha ][ 0.340985] . ( 203 sec) [ -3751.4405] [ 426] [depth= 3] . ( 203 sec) [ -3731.1547] [ 426] [depth= 24] . ( 205 sec) [ -3731.0744] [ 426] [depth= 11] . ( 212 sec) [ -3730.8970] [ 426] [depth= 2] . ( 220 sec) [ -3729.4922] [ 426] [depth= 1] . ( 220 sec) [ -3699.5224] [ 416] [depth= 10] . ( 220 sec) [ -3699.5069] [ 416] [depth= 2] . ( 227 sec) [ -3699.4325] [ 416] [depth= 5] . ( 228 sec) [ -3689.8167] [ 412] [depth= 4] . ( 228 sec) [ -3660.2068] [ 401] [depth= 3] . ( 230 sec) [ -3660.1385] [ 401] [depth= 1] . ( 231 sec) [ -3659.9288] [ 399] [depth= 1] . ( 231 sec) [ -3659.9133] [ 399] [depth= 6] . ( 233 sec) [ -3659.8527] [ 399] [depth= 4] . ( 233 sec) [ -3659.8370] [ 399] [depth= 11] . ( 234 sec) [ -3659.8118] [ 399] [depth= 7] . ( 237 sec) [ -3659.7989] [ 399] [depth= 4] . ( 240 sec) [ -3652.7574] [ 397] [depth= 3] . ( 246 sec) [ -3652.6312] [ 397] [depth= 2] . ( 246 sec) [ -3648.3010] [ 396] [depth= 3] . ( 253 sec) [ -3642.2405] [ 397] [depth= 2] . ( 259 sec) [ -3641.1321] [ 397] [depth= 3] . ( 262 sec) [ -3640.9631] [ 397] [depth= 2] . ( 271 sec) [ -3640.9399] [ 397] [depth= 2] . ( 277 sec) [ -3640.9279] [ 397] [depth= 1] . ( 286 sec) [ -3640.7737] [ 397] [depth= 2] . ( 287 sec) [ -3640.7580] [ 397] [depth= 2] . ( 288 sec) [ -3618.4225] [ 388] [depth= 15] . ( 288 sec) [ -3605.7293] [ 385] [depth= 1] . ( 289 sec) [ -3603.8451] [ 385] [depth= 6] . ( 292 sec) [ -3603.8304] [ 385] [depth= 1] . ( 295 sec) [ -3603.8174] [ 385] [depth= 1] . ( 303 sec) [ -3602.7236] [ 387] [depth= 1] . ( 308 sec) [ -3602.6502] [ 387] [depth= 9] . ( 309 sec) [ -3602.6224] [ 387] [depth= 1] . ( 314 sec) [ -3602.5903] [ 387] [depth= 2] . ( 329 sec) [ -3602.5540] [ 387] [depth= 3] . ( 349 sec) [ -3599.0742] [ 387] [depth= 1] . ( 349 sec) [ -3599.0033] [ 387] [depth= 3] . ( 352 sec) [ -3558.7929] [ 376] [depth= 1] . ( 353 sec) [ -3557.6769] [ 376] [depth= 1] . ( 355 sec) [ -3557.6621] [ 376] [depth= 1] . ( 355 sec) [ -3557.5161] [ 376] [depth= 2] . ( 357 sec) [ -3556.6459] [ 376] [depth= 1] . ( 371 sec) [ -3556.6103] [ 376] [depth= 1] . ( 379 sec) [ -3556.5904] [ 376] [depth= 1] . ( 385 sec) [ -3556.5336] [ 376] [depth= 2] . ( 390 sec) [ -3556.5085] [ 376] [depth= 1] . ( 395 sec) [ -3556.4926] [ 376] [depth= 2] . ( 395 sec) [ -3540.4775] [ 373] [depth= 12] . ( 395 sec) [ -3540.4276] [ 373] [depth= 9] . ( 397 sec) [ -3540.4165] [ 373] [depth= 2] . ( 401 sec) [ -3540.4037] [ 373] [depth= 3] . ( 401 sec) [ -3540.3037] [ 373] [depth= 1] . ( 401 sec) [ -3539.7870] [ 377] [depth= 1] . ( 409 sec) [ -3539.7517] [ 377] [depth= 1] . ( 417 sec) [ -3536.0230] [Branch lengths ] . ( 419 sec) [ -3534.7982] [GTR parameters ] . ( 419 sec) [ -3531.6257] [Alpha ][ 0.514827] . ( 439 sec) [ -3526.6279] [ 375] [depth= 2] . ( 440 sec) [ -3526.5826] [ 375] [depth= 3] . ( 448 sec) [ -3525.9908] [ 375] [depth= 4] . ( 448 sec) [ -3525.8539] [ 375] [depth= 14] . ( 450 sec) [ -3525.7596] [ 375] [depth= 3] . ( 475 sec) [ -3523.9359] [ 374] [depth= 1] . ( 480 sec) [ -3523.9116] [ 374] [depth= 4] . ( 486 sec) [ -3523.8620] [ 374] [depth= 5] . ( 497 sec) [ -3523.7490] [ 374] [depth= 1] . ( 576 sec) [ -3517.7656] [ 373] [depth= 5] . ( 627 sec) [ -3517.6454] [ 369] [depth= 1] . ( 642 sec) [ -3515.8613] [Branch lengths ] . ( 643 sec) [ -3515.7730] [GTR parameters ] . ( 644 sec) [ -3515.6807] [Alpha ][ 0.556422] . ( 675 sec) [ -3515.6211] [ 369] [depth= 2] . ( 868 sec) [ -3513.4305] [Branch lengths ] . ( 869 sec) [ -3513.4297] [GTR parameters ] . ( 869 sec) [ -3513.4289] [Alpha ][ 0.560624] . ( 1092 sec) [ -3512.4430] [Branch lengths ] . ( 1211 sec) [ -3512.4427] [Branch lengths ] . ( 1211 sec) [ -3512.4427] [Topology ] . ( 1213 sec) [ -3512.4427] [Topology ] . ( 1214 sec) [ -3512.4427] [GTR parameters ] . ( 1214 sec) [ -3512.4427] [Alpha ][ 0.561850] . Checking for NNIs, optimizing five branches... . Log likelihood of the current tree: -3512.442657. . [Random start 5/ 5] . Computing pairwise distances... . Building BioNJ tree... . Randomising the tree... . Maximizing likelihood (using SPR moves)... . ( 3 sec) [ -53823.0680] [GTR parameters ] . ( 3 sec) [ -53176.1099] [Alpha ][ 0.500960] . ( 3 sec) [ -51814.5537] [ 3260] [depth= 6] . ( 3 sec) [ -51251.5613] [ 3242] [depth= 12] . ( 3 sec) [ -50806.6426] [ 3228] [depth= 1] . ( 4 sec) [ -50243.9511] [ 3220] [depth= 9] . ( 4 sec) [ -49910.4700] [ 3203] [depth= 1] . ( 4 sec) [ -49582.1990] [ 3193] [depth= 12] . ( 4 sec) [ -49558.3239] [ 3191] [depth= 3] . ( 4 sec) [ -48926.2561] [ 3190] [depth= 7] . ( 4 sec) [ -48767.3910] [ 3141] [depth= 3] . ( 4 sec) [ -48758.9885] [ 3138] [depth= 15] . ( 4 sec) [ -48704.4638] [ 3136] [depth= 6] . ( 4 sec) [ -48626.7943] [ 3133] [depth= 11] . ( 5 sec) [ -48409.9604] [ 3110] [depth= 6] . ( 5 sec) [ -48396.4725] [ 3110] [depth= 1] . ( 5 sec) [ -47932.9234] [ 3105] [depth= 14] . ( 5 sec) [ -47926.3742] [ 3105] [depth= 2] . ( 5 sec) [ -47895.4696] [ 3105] [depth= 1] . ( 5 sec) [ -47414.4326] [ 3105] [depth= 2] . ( 5 sec) [ -47105.9454] [ 3078] [depth= 5] . ( 5 sec) [ -47101.6446] [ 3078] [depth= 4] . ( 5 sec) [ -47026.5684] [ 3078] [depth= 15] . ( 6 sec) [ -46894.2039] [ 3077] [depth= 20] . ( 6 sec) [ -46854.9643] [ 3075] [depth= 10] . ( 6 sec) [ -46359.0723] [ 3056] [depth= 15] . ( 6 sec) [ -46206.2346] [ 3055] [depth= 8] . ( 6 sec) [ -46139.4097] [ 3056] [depth= 1] . ( 6 sec) [ -46101.3842] [ 3056] [depth= 1] . ( 6 sec) [ -45831.3016] [ 3053] [depth= 10] . ( 6 sec) [ -45806.7415] [ 3053] [depth= 18] . ( 7 sec) [ -45584.2675] [ 3036] [depth= 12] . ( 7 sec) [ -45584.1499] [ 3036] [depth= 7] . ( 7 sec) [ -45086.8831] [ 3021] [depth= 26] . ( 7 sec) [ -44828.7080] [ 3001] [depth= 17] . ( 7 sec) [ -44744.8467] [ 3001] [depth= 1] . ( 7 sec) [ -44387.7529] [ 2996] [depth= 11] . ( 7 sec) [ -44079.0977] [ 2979] [depth= 9] . ( 7 sec) [ -43947.9190] [ 2948] [depth= 14] . ( 8 sec) [ -43711.6950] [ 2948] [depth= 18] . ( 8 sec) [ -43651.8564] [ 2946] [depth= 7] . ( 8 sec) [ -43263.3228] [ 2922] [depth= 10] . ( 8 sec) [ -43184.9380] [ 2917] [depth= 1] . ( 8 sec) [ -42977.5901] [ 2903] [depth= 3] . ( 8 sec) [ -42976.4053] [ 2903] [depth= 17] . ( 8 sec) [ -42950.4794] [ 2903] [depth= 7] . ( 8 sec) [ -42938.4256] [ 2903] [depth= 1] . ( 9 sec) [ -42823.7592] [ 2877] [depth= 24] . ( 9 sec) [ -42750.3851] [ 2860] [depth= 24] . ( 9 sec) [ -42636.6144] [ 2860] [depth= 11] . ( 9 sec) [ -42636.4731] [ 2860] [depth= 1] . ( 9 sec) [ -42414.2902] [ 2851] [depth= 4] . ( 9 sec) [ -42278.0436] [ 2851] [depth= 10] . ( 9 sec) [ -42269.2750] [ 2847] [depth= 9] . ( 9 sec) [ -41887.5197] [ 2847] [depth= 1] . ( 10 sec) [ -41293.4074] [ 2844] [depth= 1] . ( 10 sec) [ -41094.7239] [ 2843] [depth= 6] . ( 10 sec) [ -41023.6626] [ 2843] [depth= 3] . ( 10 sec) [ -40492.1928] [ 2852] [depth= 1] . ( 10 sec) [ -40019.8393] [ 2851] [depth= 5] . ( 10 sec) [ -39946.1833] [ 2851] [depth= 1] . ( 10 sec) [ -39892.9914] [ 2849] [depth= 6] . ( 10 sec) [ -39843.3424] [ 2828] [depth= 6] . ( 11 sec) [ -39663.8848] [ 2813] [depth= 2] . ( 11 sec) [ -39452.2737] [ 2779] [depth= 13] . ( 11 sec) [ -39001.3125] [ 2779] [depth= 10] . ( 11 sec) [ -38775.4705] [ 2748] [depth= 2] . ( 11 sec) [ -38628.0812] [ 2741] [depth= 4] . ( 11 sec) [ -38202.6510] [ 2741] [depth= 7] . ( 11 sec) [ -38104.5852] [ 2742] [depth= 1] . ( 11 sec) [ -37929.3808] [ 2735] [depth= 18] . ( 11 sec) [ -37750.3374] [ 2697] [depth= 35] . ( 12 sec) [ -37667.2759] [ 2689] [depth= 32] . ( 12 sec) [ -37495.7362] [ 2693] [depth= 1] . ( 12 sec) [ -37295.6735] [ 2684] [depth= 28] . ( 12 sec) [ -36988.4495] [ 2653] [depth= 8] . ( 12 sec) [ -36789.9057] [ 2653] [depth= 5] . ( 12 sec) [ -36711.0951] [ 2653] [depth= 17] . ( 12 sec) [ -36646.2435] [ 2651] [depth= 2] . ( 12 sec) [ -36116.0502] [ 2642] [depth= 2] . ( 13 sec) [ -36111.0371] [ 2642] [depth= 18] . ( 13 sec) [ -35843.1420] [ 2639] [depth= 6] . ( 13 sec) [ -35805.5335] [ 2637] [depth= 10] . ( 13 sec) [ -35724.8742] [ 2636] [depth= 14] . ( 13 sec) [ -35133.0124] [ 2628] [depth= 16] . ( 13 sec) [ -35129.8907] [ 2627] [depth= 9] . ( 13 sec) [ -34952.4602] [ 2593] [depth= 13] . ( 14 sec) [ -34952.3524] [ 2593] [depth= 20] . ( 14 sec) [ -34939.9808] [ 2594] [depth= 1] . ( 14 sec) [ -34731.4624] [ 2576] [depth= 13] . ( 14 sec) [ -34658.3156] [ 2576] [depth= 10] . ( 14 sec) [ -34310.1526] [ 2570] [depth= 3] . ( 14 sec) [ -33862.5902] [ 2570] [depth= 1] . ( 14 sec) [ -33547.5226] [ 2568] [depth= 10] . ( 14 sec) [ -33334.2842] [ 2568] [depth= 5] . ( 14 sec) [ -33274.0944] [ 2565] [depth= 21] . ( 15 sec) [ -32948.2334] [ 2565] [depth= 2] . ( 15 sec) [ -32837.4057] [ 2549] [depth= 2] . ( 15 sec) [ -32600.1850] [ 2520] [depth= 2] . ( 15 sec) [ -32551.3325] [ 2520] [depth= 1] . ( 15 sec) [ -32525.7335] [ 2519] [depth= 10] . ( 15 sec) [ -32474.2755] [ 2519] [depth= 6] . ( 15 sec) [ -32473.6936] [ 2519] [depth= 10] . ( 15 sec) [ -32359.6466] [ 2505] [depth= 16] . ( 16 sec) [ -32253.7196] [ 2490] [depth= 7] . ( 16 sec) [ -32038.8793] [ 2480] [depth= 7] . ( 16 sec) [ -32038.2229] [ 2480] [depth= 26] . ( 16 sec) [ -32035.4688] [ 2480] [depth= 7] . ( 16 sec) [ -32026.4659] [ 2480] [depth= 6] . ( 16 sec) [ -31661.1492] [ 2480] [depth= 11] . ( 16 sec) [ -31314.3735] [ 2476] [depth= 9] . ( 17 sec) [ -30918.4286] [ 2455] [depth= 15] . ( 17 sec) [ -30708.8240] [ 2454] [depth= 13] . ( 17 sec) [ -30407.4137] [ 2433] [depth= 21] . ( 17 sec) [ -30404.0729] [ 2433] [depth= 10] . ( 17 sec) [ -30106.6414] [ 2431] [depth= 18] . ( 17 sec) [ -29560.4974] [ 2388] [depth= 10] . ( 17 sec) [ -29502.5699] [ 2388] [depth= 7] . ( 17 sec) [ -29136.7909] [ 2383] [depth= 3] . ( 18 sec) [ -28654.1062] [ 2355] [depth= 14] . ( 18 sec) [ -28567.3980] [ 2340] [depth= 12] . ( 18 sec) [ -28421.7747] [ 2304] [depth= 13] . ( 18 sec) [ -28370.5810] [ 2304] [depth= 10] . ( 18 sec) [ -28099.7086] [ 2304] [depth= 2] . ( 18 sec) [ -28089.2565] [ 2304] [depth= 14] . ( 18 sec) [ -28086.8822] [ 2304] [depth= 3] . ( 18 sec) [ -28080.5767] [ 2302] [depth= 7] . ( 19 sec) [ -28079.3654] [ 2302] [depth= 1] . ( 19 sec) [ -28048.2419] [ 2302] [depth= 12] . ( 19 sec) [ -27645.1198] [ 2302] [depth= 3] . ( 19 sec) [ -27455.0784] [ 2302] [depth= 6] . ( 19 sec) [ -27444.7927] [ 2302] [depth= 2] . ( 19 sec) [ -27356.9028] [ 2288] [depth= 5] . ( 19 sec) [ -27351.6281] [ 2288] [depth= 1] . ( 19 sec) [ -26293.0460] [ 2268] [depth= 34] . ( 20 sec) [ -26289.2317] [ 2268] [depth= 1] . ( 20 sec) [ -25946.2047] [ 2268] [depth= 1] . ( 20 sec) [ -25900.5563] [ 2259] [depth= 7] . ( 20 sec) [ -25693.1502] [ 2233] [depth= 6] . ( 20 sec) [ -25658.5031] [ 2229] [depth= 6] . ( 20 sec) [ -25631.9257] [ 2229] [depth= 9] . ( 20 sec) [ -25275.5443] [ 2213] [depth= 19] . ( 20 sec) [ -24995.0737] [ 2213] [depth= 40] . ( 21 sec) [ -24962.1870] [ 2208] [depth= 13] . ( 21 sec) [ -24945.8418] [ 2208] [depth= 1] . ( 21 sec) [ -24944.9713] [ 2208] [depth= 1] . ( 21 sec) [ -24943.2071] [ 2208] [depth= 6] . ( 21 sec) [ -24943.0432] [ 2208] [depth= 14] . ( 21 sec) [ -24722.6165] [ 2191] [depth= 7] . ( 21 sec) [ -24722.2628] [ 2191] [depth= 9] . ( 21 sec) [ -24719.1199] [ 2189] [depth= 6] . ( 22 sec) [ -24718.3359] [ 2189] [depth= 1] . ( 22 sec) [ -24642.6432] [ 2181] [depth= 10] . ( 22 sec) [ -24641.4291] [ 2181] [depth= 16] . ( 22 sec) [ -24531.1073] [ 2165] [depth= 16] . ( 22 sec) [ -24194.0536] [ 2131] [depth= 23] . ( 22 sec) [ -24118.8416] [ 2128] [depth= 9] . ( 22 sec) [ -24103.3973] [ 2147] [depth= 1] . ( 22 sec) [ -24025.5640] [ 2132] [depth= 7] . ( 23 sec) [ -24021.8188] [ 2131] [depth= 1] . ( 23 sec) [ -23741.4197] [ 2111] [depth= 3] . ( 23 sec) [ -23702.8447] [ 2099] [depth= 16] . ( 23 sec) [ -23611.1461] [ 2067] [depth= 4] . ( 23 sec) [ -23588.6464] [ 2067] [depth= 12] . ( 23 sec) [ -23460.0744] [ 2050] [depth= 2] . ( 23 sec) [ -23459.1130] [ 2050] [depth= 2] . ( 23 sec) [ -23368.6996] [ 2043] [depth= 4] . ( 24 sec) [ -23310.2272] [ 2043] [depth= 1] . ( 24 sec) [ -23147.7591] [ 2030] [depth= 17] . ( 24 sec) [ -23078.9483] [ 2030] [depth= 1] . ( 24 sec) [ -23065.8447] [ 2023] [depth= 13] . ( 24 sec) [ -23065.7046] [ 2023] [depth= 1] . ( 24 sec) [ -23036.8209] [ 2019] [depth= 19] . ( 24 sec) [ -23036.7994] [ 2019] [depth= 31] . ( 24 sec) [ -23036.2582] [ 2019] [depth= 1] . ( 25 sec) [ -22634.3022] [ 1985] [depth= 1] . ( 25 sec) [ -22449.0545] [ 1979] [depth= 22] . ( 25 sec) [ -22376.0152] [ 1968] [depth= 9] . ( 25 sec) [ -22355.0702] [ 1968] [depth= 1] . ( 25 sec) [ -22354.8817] [ 1968] [depth= 1] . ( 25 sec) [ -22243.9111] [ 1968] [depth= 18] . ( 25 sec) [ -22243.7769] [ 1968] [depth= 26] . ( 26 sec) [ -22117.3734] [ 1968] [depth= 13] . ( 26 sec) [ -22115.3573] [ 1968] [depth= 22] . ( 26 sec) [ -22115.2579] [ 1968] [depth= 3] . ( 26 sec) [ -22106.6147] [ 1968] [depth= 10] . ( 26 sec) [ -22068.6529] [ 1968] [depth= 1] . ( 26 sec) [ -22065.0186] [ 1968] [depth= 1] . ( 26 sec) [ -22062.9576] [ 1968] [depth= 22] . ( 26 sec) [ -22062.5736] [ 1968] [depth= 17] . ( 27 sec) [ -21999.6930] [ 1966] [depth= 2] . ( 27 sec) [ -21865.7986] [ 1966] [depth= 10] . ( 27 sec) [ -21865.6310] [ 1964] [depth= 15] . ( 27 sec) [ -21799.2420] [ 1964] [depth= 4] . ( 27 sec) [ -21794.8579] [ 1964] [depth= 1] . ( 27 sec) [ -21751.7224] [ 1952] [depth= 9] . ( 27 sec) [ -21729.4513] [ 1952] [depth= 2] . ( 28 sec) [ -21728.8160] [ 1952] [depth= 1] . ( 28 sec) [ -21700.8514] [ 1952] [depth= 9] . ( 28 sec) [ -21692.0699] [ 1952] [depth= 6] . ( 28 sec) [ -21690.9364] [ 1952] [depth= 9] . ( 28 sec) [ -21593.0214] [ 1934] [depth= 26] . ( 28 sec) [ -21579.4313] [ 1934] [depth= 2] . ( 28 sec) [ -21569.8741] [ 1933] [depth= 3] . ( 28 sec) [ -21527.5878] [ 1928] [depth= 14] . ( 29 sec) [ -21462.9545] [ 1926] [depth= 16] . ( 29 sec) [ -21450.4218] [ 1926] [depth= 6] . ( 29 sec) [ -21448.7449] [ 1926] [depth= 2] . ( 29 sec) [ -21381.3433] [ 1926] [depth= 26] . ( 29 sec) [ -21379.0861] [ 1926] [depth= 15] . ( 29 sec) [ -21378.8992] [ 1926] [depth= 14] . ( 29 sec) [ -21376.5724] [ 1926] [depth= 16] . ( 30 sec) [ -21356.8876] [ 1924] [depth= 21] . ( 30 sec) [ -21333.7649] [ 1924] [depth= 8] . ( 30 sec) [ -21331.1606] [ 1924] [depth= 1] . ( 30 sec) [ -21294.4483] [ 1923] [depth= 13] . ( 30 sec) [ -21282.5799] [ 1923] [depth= 2] . ( 30 sec) [ -21276.3256] [ 1915] [depth= 15] . ( 30 sec) [ -21154.3887] [ 1915] [depth= 3] . ( 31 sec) [ -20966.8640] [ 1867] [depth= 11] . ( 31 sec) [ -20964.8902] [ 1867] [depth= 28] . ( 31 sec) [ -20882.5748] [ 1867] [depth= 1] . ( 31 sec) [ -20352.5880] [ 1839] [depth= 12] . ( 31 sec) [ -20281.0577] [ 1827] [depth= 3] . ( 31 sec) [ -20271.4866] [ 1827] [depth= 21] . ( 31 sec) [ -20246.9983] [ 1824] [depth= 2] . ( 31 sec) [ -20185.4795] [ 1812] [depth= 2] . ( 31 sec) [ -20184.9031] [ 1812] [depth= 20] . ( 32 sec) [ -20127.3104] [ 1804] [depth= 20] . ( 32 sec) [ -20041.3825] [ 1803] [depth= 10] . ( 32 sec) [ -20035.2098] [ 1803] [depth= 1] . ( 32 sec) [ -19964.3767] [ 1802] [depth= 1] . ( 32 sec) [ -19655.5304] [ 1802] [depth= 1] . ( 32 sec) [ -19642.6227] [ 1802] [depth= 2] . ( 32 sec) [ -19563.4940] [ 1785] [depth= 9] . ( 32 sec) [ -19464.0450] [ 1784] [depth= 9] . ( 33 sec) [ -18974.0748] [ 1770] [depth= 4] . ( 33 sec) [ -17980.4959] [ 1726] [depth= 21] . ( 33 sec) [ -17850.7410] [ 1726] [depth= 24] . ( 33 sec) [ -17671.9678] [ 1699] [depth= 9] . ( 33 sec) [ -17669.1659] [ 1693] [depth= 9] . ( 33 sec) [ -17668.9808] [ 1693] [depth= 10] . ( 33 sec) [ -17587.4194] [ 1693] [depth= 10] . ( 33 sec) [ -17553.4772] [ 1691] [depth= 10] . ( 34 sec) [ -17553.2019] [ 1691] [depth= 22] . ( 34 sec) [ -17542.6414] [ 1687] [depth= 2] . ( 34 sec) [ -17497.7080] [ 1673] [depth= 2] . ( 34 sec) [ -17389.7795] [ 1644] [depth= 30] . ( 34 sec) [ -17355.3448] [ 1643] [depth= 26] . ( 34 sec) [ -17309.7957] [ 1643] [depth= 11] . ( 34 sec) [ -17309.7401] [ 1643] [depth= 1] . ( 34 sec) [ -17307.9968] [ 1643] [depth= 11] . ( 35 sec) [ -16916.0885] [ 1642] [depth= 20] . ( 35 sec) [ -16914.6706] [ 1643] [depth= 1] . ( 35 sec) [ -16868.0231] [ 1639] [depth= 1] . ( 35 sec) [ -16741.4113] [ 1607] [depth= 17] . ( 35 sec) [ -16734.5306] [ 1607] [depth= 4] . ( 35 sec) [ -16733.7890] [ 1607] [depth= 1] . ( 35 sec) [ -16674.9194] [ 1607] [depth= 15] . ( 36 sec) [ -16586.9331] [ 1607] [depth= 13] . ( 36 sec) [ -16586.7796] [ 1610] [depth= 1] . ( 36 sec) [ -16585.6475] [ 1610] [depth= 7] . ( 36 sec) [ -16011.4865] [ 1592] [depth= 23] . ( 36 sec) [ -15999.6863] [ 1589] [depth= 1] . ( 36 sec) [ -15999.5235] [ 1589] [depth= 12] . ( 36 sec) [ -15994.4699] [ 1589] [depth= 25] . ( 37 sec) [ -14756.6242] [ 1589] [depth= 12] . ( 37 sec) [ -14755.9936] [ 1589] [depth= 2] . ( 37 sec) [ -14747.5492] [ 1593] [depth= 1] . ( 37 sec) [ -14595.8152] [ 1549] [depth= 17] . ( 37 sec) [ -14595.5601] [ 1549] [depth= 3] . 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( 40 sec) [ -13382.2177] [ 1407] [depth= 3] . ( 40 sec) [ -13355.5062] [ 1402] [depth= 19] . ( 40 sec) [ -13308.6992] [ 1394] [depth= 19] . ( 40 sec) [ -12981.9378] [ 1394] [depth= 8] . ( 40 sec) [ -12913.5027] [ 1391] [depth= 16] . ( 40 sec) [ -12855.3162] [ 1383] [depth= 15] . ( 41 sec) [ -12593.8112] [ 1377] [depth= 9] . ( 41 sec) [ -12332.7727] [ 1354] [depth= 6] . ( 41 sec) [ -12152.1456] [ 1354] [depth= 5] . ( 41 sec) [ -12001.6709] [ 1354] [depth= 27] . ( 41 sec) [ -11999.3163] [ 1354] [depth= 27] . ( 41 sec) [ -11975.5322] [ 1343] [depth= 2] . ( 41 sec) [ -11928.6641] [ 1333] [depth= 15] . ( 41 sec) [ -11880.8477] [ 1332] [depth= 3] . ( 42 sec) [ -11368.7963] [ 1322] [depth= 8] . ( 42 sec) [ -11357.5240] [ 1322] [depth= 1] . ( 42 sec) [ -11351.8038] [ 1322] [depth= 3] . ( 42 sec) [ -11348.7286] [ 1322] [depth= 5] . ( 42 sec) [ -11330.5754] [ 1320] [depth= 18] . ( 42 sec) [ -11323.8758] [ 1320] [depth= 2] . ( 43 sec) [ -11322.7731] [ 1320] [depth= 1] . 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( 48 sec) [ -8761.1296] [ 1057] [depth= 18] . ( 48 sec) [ -8759.4202] [ 1057] [depth= 10] . ( 48 sec) [ -8647.2004] [ 1040] [depth= 6] . ( 49 sec) [ -8644.6419] [ 1040] [depth= 27] . ( 49 sec) [ -8642.9084] [ 1037] [depth= 15] . ( 49 sec) [ -8621.0298] [ 1037] [depth= 1] . ( 49 sec) [ -8547.6531] [ 1023] [depth= 19] . ( 49 sec) [ -8443.8199] [ 1018] [depth= 4] . ( 49 sec) [ -8442.4892] [ 1018] [depth= 3] . ( 49 sec) [ -8439.5363] [ 1019] [depth= 1] . ( 49 sec) [ -8361.1940] [ 1015] [depth= 18] . ( 49 sec) [ -8250.1423] [ 992] [depth= 14] . ( 50 sec) [ -8178.5732] [ 987] [depth= 26] . ( 50 sec) [ -8178.2459] [ 987] [depth= 21] . ( 50 sec) [ -8054.0769] [ 968] [depth= 5] . ( 50 sec) [ -8044.6854] [ 968] [depth= 1] . ( 50 sec) [ -7957.8186] [ 967] [depth= 8] . ( 50 sec) [ -7957.7671] [ 967] [depth= 4] . ( 50 sec) [ -7919.8926] [ 960] [depth= 5] . ( 50 sec) [ -7691.6771] [ 960] [depth= 2] . ( 51 sec) [ -7501.0830] [ 951] [depth= 13] . ( 51 sec) [ -7407.8913] [ 939] [depth= 6] . ( 51 sec) [ -7138.3324] [ 920] [depth= 1] . ( 51 sec) [ -7020.3074] [ 907] [depth= 11] . ( 51 sec) [ -7011.5846] [ 907] [depth= 5] . ( 51 sec) [ -7011.2527] [ 907] [depth= 10] . ( 51 sec) [ -7007.9444] [ 907] [depth= 9] . ( 52 sec) [ -6959.9846] [ 905] [depth= 22] . ( 52 sec) [ -6771.9749] [ 875] [depth= 9] . ( 52 sec) [ -6764.2584] [ 875] [depth= 12] . ( 52 sec) [ -6763.9942] [ 875] [depth= 1] . ( 52 sec) [ -6763.8808] [ 875] [depth= 38] . ( 52 sec) [ -6709.3140] [ 862] [depth= 18] . ( 52 sec) [ -6709.2199] [ 862] [depth= 1] . ( 53 sec) [ -6707.8064] [ 862] [depth= 29] . ( 53 sec) [ -6664.7162] [ 864] [depth= 2] . ( 53 sec) [ -6649.6519] [ 860] [depth= 15] . ( 53 sec) [ -6649.6363] [ 860] [depth= 3] . ( 53 sec) [ -6649.2829] [ 860] [depth= 33] . ( 53 sec) [ -6645.3375] [ 856] [depth= 30] . ( 53 sec) [ -6644.9119] [ 856] [depth= 2] . ( 54 sec) [ -6485.1621] [ 856] [depth= 1] . ( 54 sec) [ -6483.8407] [ 856] [depth= 32] . ( 54 sec) [ -6471.1866] [ 854] [depth= 19] . 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( 62 sec) [ -5836.7964] [ 768] [depth= 12] . ( 63 sec) [ -5675.8370] [ 731] [depth= 20] . ( 63 sec) [ -5672.6893] [ 731] [depth= 30] . ( 63 sec) [ -5671.3036] [ 729] [depth= 14] . ( 63 sec) [ -5641.1797] [ 729] [depth= 1] . ( 63 sec) [ -5640.8744] [ 729] [depth= 6] . ( 63 sec) [ -5612.3809] [ 728] [depth= 20] . ( 64 sec) [ -5506.3310] [ 704] [depth= 24] . ( 64 sec) [ -5505.9008] [ 704] [depth= 2] . ( 64 sec) [ -5505.0612] [ 704] [depth= 1] . ( 64 sec) [ -5501.1004] [ 704] [depth= 19] . ( 64 sec) [ -5501.0809] [ 704] [depth= 2] . ( 64 sec) [ -5501.0683] [ 704] [depth= 3] . ( 64 sec) [ -5370.2144] [ 672] [depth= 17] . ( 64 sec) [ -5369.6079] [ 672] [depth= 1] . ( 65 sec) [ -5369.2761] [ 672] [depth= 1] . ( 65 sec) [ -5365.7239] [ 671] [depth= 3] . ( 65 sec) [ -5359.6528] [ 669] [depth= 7] . ( 65 sec) [ -5359.5095] [ 669] [depth= 1] . ( 66 sec) [ -5359.4742] [ 669] [depth= 13] . ( 66 sec) [ -5335.8063] [ 662] [depth= 1] . ( 66 sec) [ -5273.4765] [ 650] [depth= 6] . ( 66 sec) [ -5269.7970] [ 652] [depth= 26] . ( 66 sec) [ -5258.1244] [ 652] [depth= 3] . ( 67 sec) [ -5254.7288] [ 652] [depth= 2] . ( 67 sec) [ -5254.6938] [ 652] [depth= 3] . ( 67 sec) [ -5250.3698] [ 652] [depth= 2] . ( 67 sec) [ -5250.3410] [ 652] [depth= 3] . ( 67 sec) [ -5227.2985] [ 631] [depth= 8] . ( 67 sec) [ -5226.9269] [ 631] [depth= 9] . ( 67 sec) [ -5226.7802] [ 631] [depth= 5] . ( 68 sec) [ -5226.1463] [ 631] [depth= 9] . ( 69 sec) [ -5225.9981] [ 631] [depth= 2] . ( 69 sec) [ -5221.5863] [ 631] [depth= 18] . ( 69 sec) [ -5217.0280] [ 631] [depth= 2] . ( 70 sec) [ -4970.4875] [Branch lengths ] . ( 73 sec) [ -4953.9980] [GTR parameters ] . ( 73 sec) [ -4893.6540] [Alpha ][ 0.250961] . ( 73 sec) [ -4893.6428] [ 631] [depth= 22] . ( 74 sec) [ -4893.5338] [ 631] [depth= 2] . ( 74 sec) [ -4886.1343] [ 628] [depth= 2] . ( 74 sec) [ -4855.4163] [ 610] [depth= 2] . ( 75 sec) [ -4855.1000] [ 607] [depth= 15] . ( 75 sec) [ -4855.0827] [ 607] [depth= 8] . ( 75 sec) [ -4853.3620] [ 606] [depth= 3] . ( 75 sec) [ -4782.1901] [ 585] [depth= 7] . ( 75 sec) [ -4778.7615] [ 585] [depth= 12] . ( 75 sec) [ -4778.7477] [ 585] [depth= 7] . ( 76 sec) [ -4778.2825] [ 589] [depth= 13] . ( 77 sec) [ -4778.2714] [ 589] [depth= 9] . ( 77 sec) [ -4778.2586] [ 589] [depth= 6] . ( 78 sec) [ -4778.2250] [ 589] [depth= 1] . ( 79 sec) [ -4777.7638] [ 589] [depth= 21] . ( 81 sec) [ -4777.7321] [ 589] [depth= 22] . ( 81 sec) [ -4777.6913] [ 589] [depth= 19] . ( 82 sec) [ -4777.6696] [ 589] [depth= 4] . ( 82 sec) [ -4777.1200] [ 589] [depth= 4] . ( 82 sec) [ -4686.1721] [ 573] [depth= 13] . ( 82 sec) [ -4684.2571] [ 573] [depth= 7] . ( 82 sec) [ -4684.0308] [ 573] [depth= 7] . ( 83 sec) [ -4671.7959] [ 568] [depth= 3] . ( 83 sec) [ -4671.7769] [ 568] [depth= 1] . ( 83 sec) [ -4671.5563] [ 568] [depth= 6] . ( 83 sec) [ -4605.9041] [ 550] [depth= 8] . ( 83 sec) [ -4589.8094] [ 549] [depth= 8] . ( 84 sec) [ -4589.6684] [ 549] [depth= 9] . 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( 98 sec) [ -4318.7562] [ 488] [depth= 2] . ( 98 sec) [ -4299.0715] [ 480] [depth= 5] . ( 99 sec) [ -4299.0593] [ 480] [depth= 10] . ( 99 sec) [ -4299.0019] [ 480] [depth= 10] . ( 99 sec) [ -4297.7555] [ 480] [depth= 11] . ( 99 sec) [ -4297.5808] [ 480] [depth= 7] . ( 99 sec) [ -4297.5592] [ 480] [depth= 2] . ( 100 sec) [ -4297.5051] [ 480] [depth= 3] . ( 100 sec) [ -4297.3260] [ 480] [depth= 4] . ( 100 sec) [ -4297.2755] [ 480] [depth= 2] . ( 100 sec) [ -4297.2197] [ 480] [depth= 1] . ( 101 sec) [ -4273.9776] [ 476] [depth= 16] . ( 101 sec) [ -4273.8990] [ 476] [depth= 17] . ( 101 sec) [ -4257.1864] [ 470] [depth= 3] . ( 102 sec) [ -4257.1692] [ 470] [depth= 9] . ( 102 sec) [ -4257.0685] [ 470] [depth= 2] . ( 102 sec) [ -4200.3789] [ 457] [depth= 1] . ( 102 sec) [ -4193.2683] [ 455] [depth= 9] . ( 102 sec) [ -4193.2027] [ 455] [depth= 3] . ( 102 sec) [ -4000.1332] [ 459] [depth= 1] . ( 103 sec) [ -4000.1164] [ 459] [depth= 1] . ( 104 sec) [ -3999.9517] [ 457] [depth= 4] . ( 104 sec) [ -3990.3861] [ 453] [depth= 2] . ( 105 sec) [ -3986.8895] [ 454] [depth= 1] . ( 105 sec) [ -3986.8579] [ 454] [depth= 4] . ( 111 sec) [ -3985.7398] [ 454] [depth= 3] . ( 112 sec) [ -3985.6927] [ 454] [depth= 16] . ( 114 sec) [ -3892.1889] [ 429] [depth= 15] . ( 114 sec) [ -3889.5489] [ 429] [depth= 4] . ( 114 sec) [ -3889.5318] [ 429] [depth= 4] . ( 115 sec) [ -3875.7577] [ 429] [depth= 3] . ( 116 sec) [ -3875.6069] [ 430] [depth= 4] . ( 117 sec) [ -3875.5936] [ 430] [depth= 4] . ( 117 sec) [ -3872.0261] [ 430] [depth= 1] . ( 117 sec) [ -3865.2733] [ 429] [depth= 24] . ( 118 sec) [ -3865.2462] [ 429] [depth= 4] . ( 118 sec) [ -3865.2357] [ 429] [depth= 12] . ( 118 sec) [ -3865.1740] [ 429] [depth= 2] . ( 118 sec) [ -3865.0312] [ 429] [depth= 2] . ( 118 sec) [ -3857.8993] [ 427] [depth= 13] . ( 118 sec) [ -3857.4625] [ 427] [depth= 4] . ( 120 sec) [ -3857.2229] [ 427] [depth= 1] . ( 120 sec) [ -3857.1858] [ 427] [depth= 3] . ( 120 sec) [ -3853.8414] [ 427] [depth= 4] . ( 121 sec) [ -3853.8235] [ 427] [depth= 2] . ( 123 sec) [ -3853.8051] [ 427] [depth= 4] . ( 124 sec) [ -3838.6674] [ 423] [depth= 1] . ( 124 sec) [ -3821.2104] [ 421] [depth= 19] . ( 124 sec) [ -3821.1400] [ 421] [depth= 3] . ( 124 sec) [ -3820.4191] [ 421] [depth= 10] . ( 124 sec) [ -3820.3608] [ 421] [depth= 2] . ( 124 sec) [ -3814.0607] [ 421] [depth= 2] . ( 125 sec) [ -3814.0502] [ 421] [depth= 7] . ( 125 sec) [ -3813.7500] [ 421] [depth= 2] . ( 125 sec) [ -3813.3030] [ 421] [depth= 9] . ( 125 sec) [ -3813.2630] [ 421] [depth= 11] . ( 126 sec) [ -3804.7793] [ 420] [depth= 3] . ( 126 sec) [ -3804.7691] [ 420] [depth= 1] . ( 126 sec) [ -3804.0841] [ 420] [depth= 1] . ( 126 sec) [ -3803.9060] [ 420] [depth= 1] . ( 127 sec) [ -3803.8647] [ 420] [depth= 2] . ( 127 sec) [ -3803.8320] [ 420] [depth= 7] . ( 127 sec) [ -3803.8210] [ 420] [depth= 3] . ( 127 sec) [ -3803.7969] [ 420] [depth= 8] . ( 128 sec) [ -3803.7769] [ 420] [depth= 3] . ( 130 sec) [ -3803.2119] [ 420] [depth= 2] . ( 130 sec) [ -3803.1030] [ 420] [depth= 6] . ( 130 sec) [ -3802.9041] [ 420] [depth= 3] . ( 131 sec) [ -3802.8467] [ 420] [depth= 6] . ( 131 sec) [ -3801.9359] [ 420] [depth= 6] . ( 131 sec) [ -3791.6288] [ 418] [depth= 5] . ( 132 sec) [ -3791.6047] [ 418] [depth= 9] . ( 133 sec) [ -3791.5938] [ 418] [depth= 2] . ( 133 sec) [ -3791.5375] [ 418] [depth= 2] . ( 134 sec) [ -3780.9663] [ 416] [depth= 1] . ( 134 sec) [ -3780.9019] [ 416] [depth= 1] . ( 134 sec) [ -3780.8803] [ 416] [depth= 3] . ( 134 sec) [ -3780.8685] [ 416] [depth= 2] . ( 138 sec) [ -3762.3304] [ 413] [depth= 9] . ( 138 sec) [ -3759.6323] [ 412] [depth= 1] . ( 138 sec) [ -3759.5312] [ 412] [depth= 1] . ( 143 sec) [ -3756.7503] [ 411] [depth= 10] . ( 143 sec) [ -3756.4824] [ 411] [depth= 4] . ( 143 sec) [ -3756.2159] [ 411] [depth= 2] . ( 146 sec) [ -3751.1358] [ 410] [depth= 8] . ( 146 sec) [ -3738.2982] [ 408] [depth= 6] . ( 149 sec) [ -3738.0229] [ 408] [depth= 1] . ( 149 sec) [ -3737.3756] [ 408] [depth= 12] . ( 151 sec) [ -3737.3656] [ 408] [depth= 3] . ( 152 sec) [ -3737.1140] [ 408] [depth= 2] . ( 152 sec) [ -3737.0392] [ 408] [depth= 8] . ( 153 sec) [ -3737.0142] [ 408] [depth= 2] . ( 155 sec) [ -3731.5047] [ 407] [depth= 12] . ( 156 sec) [ -3731.4682] [ 407] [depth= 11] . ( 156 sec) [ -3731.4538] [ 407] [depth= 9] . ( 157 sec) [ -3731.2446] [ 407] [depth= 2] . ( 158 sec) [ -3636.6801] [ 384] [depth= 12] . ( 158 sec) [ -3636.5203] [ 384] [depth= 11] . ( 162 sec) [ -3632.0077] [ 383] [depth= 3] . ( 163 sec) [ -3631.9574] [ 383] [depth= 2] . ( 163 sec) [ -3617.9688] [ 383] [depth= 3] . ( 164 sec) [ -3617.5533] [ 383] [depth= 1] . ( 166 sec) [ -3617.5388] [ 383] [depth= 8] . ( 170 sec) [ -3602.8159] [ 379] [depth= 1] . ( 171 sec) [ -3602.5924] [ 379] [depth= 6] . ( 173 sec) [ -3602.1084] [ 379] [depth= 2] . ( 173 sec) [ -3602.0727] [ 379] [depth= 1] . ( 173 sec) [ -3602.0489] [ 379] [depth= 1] . ( 174 sec) [ -3598.9159] [ 379] [depth= 2] . ( 174 sec) [ -3596.0960] [ 378] [depth= 1] . ( 175 sec) [ -3592.9911] [ 378] [depth= 1] . ( 175 sec) [ -3592.9380] [ 378] [depth= 2] . ( 175 sec) [ -3592.9240] [ 378] [depth= 1] . ( 184 sec) [ -3592.8965] [ 378] [depth= 5] . ( 184 sec) [ -3592.8559] [ 378] [depth= 3] . ( 187 sec) [ -3592.8066] [ 378] [depth= 1] . ( 188 sec) [ -3592.7454] [ 378] [depth= 4] . ( 190 sec) [ -3592.7333] [ 378] [depth= 1] . ( 190 sec) [ -3592.7215] [ 378] [depth= 3] . ( 191 sec) [ -3592.7007] [ 378] [depth= 5] . ( 191 sec) [ -3592.6563] [ 378] [depth= 2] . ( 192 sec) [ -3592.5980] [ 378] [depth= 1] . ( 192 sec) [ -3586.1907] [ 378] [depth= 1] . ( 192 sec) [ -3585.7131] [ 378] [depth= 5] . ( 192 sec) [ -3585.6358] [ 378] [depth= 2] . ( 193 sec) [ -3585.6196] [ 378] [depth= 5] . ( 193 sec) [ -3585.1380] [ 378] [depth= 5] . ( 193 sec) [ -3585.1273] [ 378] [depth= 11] . ( 197 sec) [ -3584.5118] [ 375] [depth= 1] . ( 198 sec) [ -3584.4965] [ 375] [depth= 4] . ( 198 sec) [ -3584.1787] [ 375] [depth= 3] . ( 198 sec) [ -3584.1474] [ 375] [depth= 3] . ( 199 sec) [ -3583.5470] [ 377] [depth= 1] . ( 200 sec) [ -3580.7202] [ 376] [depth= 5] . ( 200 sec) [ -3580.6831] [ 376] [depth= 1] . ( 200 sec) [ -3580.6675] [ 376] [depth= 15] . ( 201 sec) [ -3580.6543] [ 376] [depth= 2] . ( 207 sec) [ -3580.6169] [ 376] [depth= 3] . ( 207 sec) [ -3576.5323] [ 376] [depth= 3] . ( 207 sec) [ -3576.5104] [ 376] [depth= 1] . ( 207 sec) [ -3576.4824] [ 376] [depth= 2] . ( 207 sec) [ -3576.4721] [ 376] [depth= 2] . ( 211 sec) [ -3576.4475] [ 376] [depth= 2] . ( 212 sec) [ -3576.4320] [ 376] [depth= 1] . ( 212 sec) [ -3575.6772] [ 376] [depth= 1] . ( 213 sec) [ -3575.6075] [ 376] [depth= 1] . ( 215 sec) [ -3575.5969] [ 376] [depth= 2] . ( 215 sec) [ -3575.5499] [ 376] [depth= 1] . ( 216 sec) [ -3575.0159] [ 376] [depth= 1] . ( 221 sec) [ -3574.8643] [ 376] [depth= 2] . ( 221 sec) [ -3574.8498] [ 376] [depth= 1] . ( 222 sec) [ -3573.8372] [ 376] [depth= 6] . ( 222 sec) [ -3573.8030] [ 376] [depth= 2] . ( 227 sec) [ -3555.9651] [Branch lengths ] . ( 229 sec) [ -3554.2391] [GTR parameters ] . ( 229 sec) [ -3544.5535] [Alpha ][ 0.500941] . ( 254 sec) [ -3517.4810] [ 372] [depth= 15] . ( 267 sec) [ -3516.9820] [ 373] [depth= 2] . ( 277 sec) [ -3516.9712] [ 373] [depth= 3] . ( 280 sec) [ -3516.9601] [ 373] [depth= 2] . ( 281 sec) [ -3516.4540] [ 373] [depth= 3] . ( 291 sec) [ -3516.0658] [ 369] [depth= 1] . ( 341 sec) [ -3515.9450] [ 369] [depth= 2] . ( 354 sec) [ -3515.9067] [ 369] [depth= 2] . ( 443 sec) [ -3515.2886] [ 369] [depth= 11] . ( 444 sec) [ -3513.6718] [ 369] [depth= 18] . ( 456 sec) [ -3513.0011] [Branch lengths ] . ( 458 sec) [ -3512.6341] [GTR parameters ] . ( 458 sec) [ -3512.4553] [Alpha ][ 0.558119] . ( 689 sec) [ -3512.4467] [Branch lengths ] . ( 811 sec) [ -3512.4461] [Branch lengths ] . ( 811 sec) [ -3512.4461] [Topology ] . ( 813 sec) [ -3512.4461] [Topology ] . ( 814 sec) [ -3512.4436] [GTR parameters ] . ( 814 sec) [ -3512.4430] [Alpha ][ 0.561792] . ( 814 sec) [ -3512.4430] [Topology ] . ( 816 sec) [ -3512.4429] [Topology ] . ( 817 sec) [ -3512.4429] [GTR parameters ] . ( 817 sec) [ -3512.4429] [Alpha ][ 0.561792] . Checking for NNIs, optimizing five branches... . Log likelihood of the current tree: -3512.442924. . Computing pairwise distances... . Building BioNJ tree... . Maximizing likelihood (using NNI moves)... . ( 3 sec) [ -3531.0072] [GTR parameters ] . ( 4 sec) [ -3527.8965] [Alpha ][ 0.577459] . ( 4 sec) [ -3527.8965] [Topology ] . ( 6 sec) [ -3510.2444] [Topology ] . ( 9 sec) [ -3508.5708] [Topology ] . ( 11 sec) [ -3508.2867] [Topology ] . ( 13 sec) [ -3508.2234] [Topology ] . ( 15 sec) [ -3508.2072] [Topology ] . ( 17 sec) [ -3508.2027] [Topology ] . ( 19 sec) [ -3508.2013] [Topology ] . Checking for NNIs, optimizing five branches... . ( 31 sec) [ -3508.0718] [GTR parameters ] . ( 31 sec) [ -3508.0712] [Alpha ][ 0.573895] . ( 31 sec) [ -3508.0712] [Topology ] . ( 33 sec) [ -3508.0703] [Topology ] . Checking for NNIs, optimizing five branches... . ( 43 sec) [ -3508.0703] [GTR parameters ] . ( 43 sec) [ -3508.0703] [Alpha ][ 0.573191] . ( 43 sec) [ -3508.0703] [Topology ] . ( 45 sec) [ -3508.0702] [Topology ] . Checking for NNIs, optimizing five branches... . Checking for NNIs, optimizing five branches... . Maximizing likelihood (using SPR moves)... . ( 66 sec) [ -3531.0072] [GTR parameters ] . ( 67 sec) [ -3527.8965] [Alpha ][ 0.577459] . ( 68 sec) [ -3527.8479] [ 369] [depth= 1] . ( 68 sec) [ -3527.8239] [ 369] [depth= 1] . ( 68 sec) [ -3527.8118] [ 369] [depth= 1] . ( 68 sec) [ -3527.7895] [ 369] [depth= 2] . ( 69 sec) [ -3527.5963] [ 369] [depth= 1] . ( 69 sec) [ -3527.5160] [ 369] [depth= 1] . ( 69 sec) [ -3527.4234] [ 369] [depth= 1] . ( 69 sec) [ -3527.3767] [ 369] [depth= 1] . ( 70 sec) [ -3527.3454] [ 369] [depth= 1] . ( 70 sec) [ -3526.6627] [ 369] [depth= 1] . ( 71 sec) [ -3526.5187] [ 369] [depth= 1] . ( 72 sec) [ -3525.6629] [ 371] [depth= 2] . ( 72 sec) [ -3525.3201] [ 371] [depth= 1] . ( 74 sec) [ -3525.2826] [ 371] [depth= 1] . ( 74 sec) [ -3525.1647] [ 371] [depth= 9] . ( 74 sec) [ -3525.1288] [ 371] [depth= 1] . ( 74 sec) [ -3525.0164] [ 371] [depth= 6] . ( 75 sec) [ -3524.9966] [ 371] [depth= 1] . ( 75 sec) [ -3524.9866] [ 371] [depth= 2] . ( 80 sec) [ -3524.9735] [ 371] [depth= 1] . ( 81 sec) [ -3524.9627] [ 371] [depth= 1] . ( 82 sec) [ -3523.8521] [ 371] [depth= 1] . ( 82 sec) [ -3523.0114] [ 371] [depth= 1] . ( 82 sec) [ -3522.9783] [ 371] [depth= 1] . ( 82 sec) [ -3522.8374] [ 371] [depth= 1] . ( 105 sec) [ -3522.8214] [ 371] [depth= 1] . ( 106 sec) [ -3522.8100] [ 371] [depth= 1] . ( 129 sec) [ -3522.7923] [ 371] [depth= 2] . ( 129 sec) [ -3522.7272] [ 371] [depth= 9] . ( 129 sec) [ -3522.6714] [ 371] [depth= 7] . ( 129 sec) [ -3522.6361] [ 371] [depth= 3] . ( 146 sec) [ -3522.6060] [ 371] [depth= 5] . ( 148 sec) [ -3522.4612] [ 371] [depth= 4] . ( 151 sec) [ -3522.4477] [ 371] [depth= 1] . ( 152 sec) [ -3522.3715] [ 371] [depth= 28] . ( 152 sec) [ -3522.3332] [ 371] [depth= 27] . ( 152 sec) [ -3521.9724] [ 371] [depth= 2] . ( 153 sec) [ -3521.9393] [ 371] [depth= 2] . ( 153 sec) [ -3521.9117] [ 371] [depth= 27] . ( 186 sec) [ -3521.8083] [ 371] [depth= 3] . ( 186 sec) [ -3521.6973] [ 371] [depth= 3] . ( 186 sec) [ -3521.0631] [ 371] [depth= 3] . ( 186 sec) [ -3520.9156] [ 371] [depth= 1] . ( 187 sec) [ -3519.9119] [ 371] [depth= 4] . ( 187 sec) [ -3517.6696] [ 370] [depth= 1] . ( 207 sec) [ -3517.4609] [ 370] [depth= 4] . ( 207 sec) [ -3517.4300] [ 370] [depth= 4] . ( 207 sec) [ -3517.4065] [ 370] [depth= 2] . ( 208 sec) [ -3517.3814] [ 370] [depth= 2] . ( 216 sec) [ -3512.8983] [ 369] [depth= 1] . ( 219 sec) [ -3512.4324] [ 369] [depth= 1] . ( 219 sec) [ -3512.3180] [ 369] [depth= 4] . ( 220 sec) [ -3512.3034] [ 369] [depth= 4] . ( 224 sec) [ -3512.2889] [ 369] [depth= 4] . ( 266 sec) [ -3508.2210] [Branch lengths ] . ( 268 sec) [ -3508.0541] [GTR parameters ] . ( 268 sec) [ -3508.0535] [Alpha ][ 0.573103] . ( 488 sec) [ -3508.0092] [Branch lengths ] . ( 607 sec) [ -3508.0080] [Branch lengths ] . ( 607 sec) [ -3508.0080] [Topology ] . ( 610 sec) [ -3508.0080] [Topology ] . ( 610 sec) [ -3508.0080] [GTR parameters ] . ( 610 sec) [ -3508.0079] [Alpha ][ 0.571928] . Checking for NNIs, optimizing five branches... . Log likelihood obtained after NNI moves : -3508.070176 . Log likelihood obtained after SPR moves : -3508.007923 . Log likelihood of the current tree: -3508.007923. . Printing the most likely tree in file 'nucleic_M2572_191x990_2006.phy_phyml_tree.txt'... . Best log likelihood : -3508.007923 . Time used 0h10m21s oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo 5345.61user 0.00system 1:29:28elapsed 99%CPU (0avgtext+0avgdata 0maxresident)k 0inputs+0outputs (0major+0minor)pagefaults 0swaps