.......................... ooooooooooooooooooooooooooooo CURRENT SETTINGS ooooooooooooooooooooooooooooooooooo .......................... . Sequence filename : nucleic_M2792_166x812_2006.phy . Data type : dna . Sequence format : interleaved . Number of data sets : 1 . Nb of bootstrapped data sets : 0 . Model name : GTR . Proportion of invariable sites : 0.000000 . Number of subst. rate categs : 4 . Gamma distribution parameter : estimated . 'Middle' of each rate class : mean . Nucleotide equilibrium frequencies : empirical . Optimise tree topology : yes . Tree topology search : Best of NNIs and SPRs . Starting tree : BioNJ . Add random input tree : yes . Number of random starting trees : 5 . Optimise branch lengths : yes . Optimise substitution model parameters : yes . Run ID : none oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo . 1 sites are made from completely undetermined states ('X', '-', '?' or 'N')... . Compressing sequences... . 616 patterns found. (out of a total of 812 sites) . 322 sites without polymorphism (39.66%). . [Random start 1/ 5] . Computing pairwise distances... . Building BioNJ tree... . Randomising the tree... . This analysis requires at least 54Mo of memory space. . Maximizing likelihood (using SPR moves)... . ( 5 sec) [ -52875.9140] [GTR parameters ] . ( 5 sec) [ -51619.1781] [Alpha ][ 0.500960] . ( 6 sec) [ -51328.7350] [ 7224] [depth= 8] . ( 6 sec) [ -50876.5714] [ 7174] [depth= 12] . ( 6 sec) [ -50704.0217] [ 7173] [depth= 2] . ( 7 sec) [ -50517.9028] [ 7170] [depth= 8] . ( 7 sec) [ -50476.2561] [ 7147] [depth= 7] . ( 7 sec) [ -50461.4901] [ 7147] [depth= 1] . ( 7 sec) [ -49657.1667] [ 7137] [depth= 3] . ( 8 sec) [ -49427.3949] [ 7134] [depth= 10] . ( 9 sec) [ -49000.8501] [ 7128] [depth= 16] . ( 9 sec) [ -48936.3578] [ 7128] [depth= 2] . ( 9 sec) [ -48921.4514] [ 7123] [depth= 2] . ( 10 sec) [ -48670.1035] [ 7096] [depth= 1] . ( 10 sec) [ -48602.7514] [ 7086] [depth= 24] . ( 10 sec) [ -48426.5327] [ 7068] [depth= 25] . ( 10 sec) [ -47996.9865] [ 7067] [depth= 2] . ( 11 sec) [ -47971.6882] [ 7062] [depth= 4] . ( 11 sec) [ -47635.1937] [ 7061] [depth= 1] . ( 11 sec) [ -47293.0339] [ 6991] [depth= 25] . ( 12 sec) [ -47284.9332] [ 6994] [depth= 1] . ( 12 sec) [ -47104.3580] [ 6985] [depth= 1] . ( 12 sec) [ -46741.0188] [ 6987] [depth= 1] . ( 13 sec) [ -46712.8889] [ 6983] [depth= 1] . ( 13 sec) [ -46649.3756] [ 6986] [depth= 1] . ( 13 sec) [ -46572.9698] [ 6972] [depth= 31] . ( 14 sec) [ -46308.1636] [ 6923] [depth= 28] . ( 14 sec) [ -46192.5158] [ 6905] [depth= 13] . ( 14 sec) [ -45872.7152] [ 6846] [depth= 10] . ( 15 sec) [ -45707.8984] [ 6819] [depth= 30] . ( 15 sec) [ -45408.8130] [ 6845] [depth= 22] . ( 15 sec) [ -45289.7730] [ 6818] [depth= 28] . ( 16 sec) [ -45133.2421] [ 6768] [depth= 9] . ( 16 sec) [ -44785.9831] [ 6702] [depth= 21] . ( 17 sec) [ -44758.5634] [ 6688] [depth= 8] . ( 17 sec) [ -44671.9741] [ 6668] [depth= 19] . ( 17 sec) [ -44510.3863] [ 6657] [depth= 8] . ( 18 sec) [ -44209.1666] [ 6626] [depth= 9] . ( 18 sec) [ -44173.9325] [ 6614] [depth= 19] . ( 18 sec) [ -43931.5865] [ 6579] [depth= 14] . ( 19 sec) [ -43782.6526] [ 6511] [depth= 20] . ( 19 sec) [ -43480.9222] [ 6489] [depth= 8] . ( 19 sec) [ -42605.9866] [ 6409] [depth= 29] . ( 20 sec) [ -42589.7203] [ 6409] [depth= 15] . ( 20 sec) [ -42403.0389] [ 6370] [depth= 9] . ( 21 sec) [ -42138.7638] [ 6311] [depth= 12] . ( 21 sec) [ -42102.3584] [ 6311] [depth= 14] . ( 21 sec) [ -41859.3130] [ 6253] [depth= 3] . ( 22 sec) [ -41818.6932] [ 6254] [depth= 6] . ( 22 sec) [ -41694.9598] [ 6249] [depth= 10] . ( 23 sec) [ -41242.0966] [ 6223] [depth= 15] . ( 23 sec) [ -41240.7602] [ 6224] [depth= 1] . ( 23 sec) [ -41054.1157] [ 6222] [depth= 32] . ( 24 sec) [ -40997.6961] [ 6206] [depth= 25] . ( 24 sec) [ -40941.2956] [ 6198] [depth= 10] . ( 24 sec) [ -40728.0295] [ 6168] [depth= 6] . ( 25 sec) [ -40593.9565] [ 6160] [depth= 9] . ( 25 sec) [ -40439.5566] [ 6140] [depth= 9] . ( 26 sec) [ -40430.3104] [ 6136] [depth= 4] . ( 26 sec) [ -40418.4956] [ 6133] [depth= 4] . ( 26 sec) [ -40396.3046] [ 6133] [depth= 1] . ( 27 sec) [ -40298.0034] [ 6119] [depth= 2] . ( 27 sec) [ -40279.2525] [ 6119] [depth= 1] . ( 27 sec) [ -40177.0058] [ 6107] [depth= 14] . ( 27 sec) [ -40166.6744] [ 6107] [depth= 1] . ( 28 sec) [ -40071.3387] [ 6077] [depth= 2] . ( 28 sec) [ -40033.2026] [ 6077] [depth= 4] . ( 28 sec) [ -40007.4947] [ 6079] [depth= 3] . ( 29 sec) [ -39908.4369] [ 6059] [depth= 22] . ( 29 sec) [ -39874.4981] [ 6050] [depth= 3] . ( 29 sec) [ -39855.9756] [ 6049] [depth= 5] . ( 30 sec) [ -39650.9824] [ 6002] [depth= 8] . ( 30 sec) [ -39575.1718] [ 5990] [depth= 15] . ( 30 sec) [ -39571.8829] [ 5990] [depth= 3] . ( 31 sec) [ -39429.3062] [ 5946] [depth= 11] . ( 31 sec) [ -39391.0730] [ 5942] [depth= 19] . ( 32 sec) [ -39233.7428] [ 5936] [depth= 9] . ( 32 sec) [ -39173.5502] [ 5940] [depth= 1] . ( 32 sec) [ -38884.0724] [ 5928] [depth= 19] . ( 33 sec) [ -38782.3467] [ 5876] [depth= 13] . ( 33 sec) [ -38624.9117] [ 5860] [depth= 12] . ( 33 sec) [ -38268.5381] [ 5841] [depth= 18] . ( 34 sec) [ -38150.7865] [ 5841] [depth= 1] . ( 34 sec) [ -37853.6009] [ 5835] [depth= 19] . ( 34 sec) [ -37492.8641] [ 5812] [depth= 19] . ( 35 sec) [ -37406.2223] [ 5799] [depth= 19] . ( 35 sec) [ -37328.5828] [ 5783] [depth= 18] . ( 35 sec) [ -37168.5795] [ 5745] [depth= 11] . ( 36 sec) [ -37083.0038] [ 5740] [depth= 1] . ( 36 sec) [ -36771.5015] [ 5723] [depth= 29] . ( 36 sec) [ -36425.9869] [ 5679] [depth= 27] . ( 37 sec) [ -36386.9667] [ 5669] [depth= 1] . ( 37 sec) [ -35607.1497] [ 5599] [depth= 15] . ( 38 sec) [ -35362.4696] [ 5530] [depth= 15] . ( 38 sec) [ -35007.9460] [ 5505] [depth= 9] . ( 38 sec) [ -34948.4904] [ 5497] [depth= 10] . ( 39 sec) [ -34678.9741] [ 5462] [depth= 17] . ( 39 sec) [ -34618.7043] [ 5454] [depth= 13] . ( 40 sec) [ -34617.0912] [ 5452] [depth= 3] . ( 40 sec) [ -34555.8365] [ 5455] [depth= 1] . ( 40 sec) [ -34529.3735] [ 5450] [depth= 35] . ( 41 sec) [ -34452.6057] [ 5431] [depth= 27] . ( 41 sec) [ -34391.6223] [ 5423] [depth= 1] . ( 41 sec) [ -34264.1069] [ 5413] [depth= 3] . ( 42 sec) [ -33984.4071] [ 5411] [depth= 8] . ( 42 sec) [ -33982.2420] [ 5411] [depth= 27] . ( 43 sec) [ -33908.3313] [ 5393] [depth= 25] . ( 43 sec) [ -33871.1157] [ 5386] [depth= 25] . ( 44 sec) [ -33771.9230] [ 5362] [depth= 31] . ( 44 sec) [ -33592.4845] [ 5319] [depth= 1] . ( 45 sec) [ -33561.7902] [ 5321] [depth= 10] . ( 45 sec) [ -33486.4274] [ 5299] [depth= 7] . ( 45 sec) [ -33473.2234] [ 5302] [depth= 1] . ( 46 sec) [ -33437.5391] [ 5296] [depth= 33] . ( 46 sec) [ -33109.1195] [ 5271] [depth= 24] . ( 47 sec) [ -32767.4675] [ 5205] [depth= 7] . ( 47 sec) [ -32640.3081] [ 5195] [depth= 13] . ( 47 sec) [ -32467.4677] [ 5165] [depth= 27] . ( 48 sec) [ -31993.9561] [ 5084] [depth= 24] . ( 48 sec) [ -31856.2176] [ 5087] [depth= 4] . ( 49 sec) [ -31846.8496] [ 5087] [depth= 13] . ( 49 sec) [ -31751.5334] [ 5080] [depth= 32] . ( 50 sec) [ -31593.8542] [ 5080] [depth= 7] . ( 50 sec) [ -31584.5711] [ 5078] [depth= 1] . ( 51 sec) [ -31496.3424] [ 5044] [depth= 17] . ( 51 sec) [ -31464.5227] [ 5039] [depth= 8] . ( 51 sec) [ -31296.3943] [ 5001] [depth= 20] . ( 52 sec) [ -31179.9742] [ 4975] [depth= 5] . ( 52 sec) [ -30953.3712] [ 4953] [depth= 12] . ( 53 sec) [ -30837.9490] [ 4959] [depth= 1] . ( 53 sec) [ -30798.3906] [ 4951] [depth= 1] . ( 54 sec) [ -30788.2762] [ 4951] [depth= 1] . ( 54 sec) [ -30636.9467] [ 4917] [depth= 13] . ( 54 sec) [ -30244.9803] [ 4883] [depth= 11] . ( 55 sec) [ -29393.6721] [ 4871] [depth= 8] . ( 55 sec) [ -29393.3401] [ 4872] [depth= 1] . ( 56 sec) [ -29346.4896] [ 4826] [depth= 8] . ( 56 sec) [ -29200.7541] [ 4827] [depth= 20] . ( 57 sec) [ -28279.8334] [ 4796] [depth= 20] . ( 57 sec) [ -27763.7889] [ 4796] [depth= 1] . ( 57 sec) [ -27064.4728] [ 4792] [depth= 26] . ( 57 sec) [ -26742.0034] [ 4735] [depth= 3] . ( 58 sec) [ -26576.9999] [ 4702] [depth= 27] . ( 58 sec) [ -26575.9207] [ 4702] [depth= 1] . ( 58 sec) [ -26223.7364] [ 4702] [depth= 9] . ( 58 sec) [ -25815.2870] [ 4702] [depth= 1] . ( 58 sec) [ -25682.4494] [ 4657] [depth= 23] . ( 59 sec) [ -25240.5404] [ 4598] [depth= 10] . ( 59 sec) [ -25226.3772] [ 4600] [depth= 1] . ( 59 sec) [ -25040.6618] [ 4544] [depth= 20] . ( 59 sec) [ -25008.8356] [ 4532] [depth= 14] . ( 60 sec) [ -25008.7660] [ 4533] [depth= 3] . ( 60 sec) [ -25006.5869] [ 4514] [depth= 18] . ( 60 sec) [ -24984.7384] [ 4514] [depth= 1] . ( 60 sec) [ -24850.1381] [ 4495] [depth= 15] . ( 60 sec) [ -24844.7696] [ 4499] [depth= 1] . ( 61 sec) [ -24826.7298] [ 4499] [depth= 3] . ( 61 sec) [ -24766.7200] [ 4468] [depth= 1] . ( 61 sec) [ -24655.4839] [ 4473] [depth= 27] . ( 61 sec) [ -24650.3098] [ 4469] [depth= 1] . ( 62 sec) [ -24581.8748] [ 4456] [depth= 6] . ( 62 sec) [ -24575.6889] [ 4455] [depth= 32] . ( 62 sec) [ -24498.2297] [ 4441] [depth= 7] . ( 63 sec) [ -24326.6253] [ 4437] [depth= 5] . ( 63 sec) [ -24248.7596] [ 4433] [depth= 7] . ( 63 sec) [ -24087.4281] [ 4401] [depth= 19] . ( 63 sec) [ -23965.8614] [ 4370] [depth= 1] . ( 64 sec) [ -23957.5900] [ 4369] [depth= 1] . ( 64 sec) [ -23839.9065] [ 4341] [depth= 19] . ( 64 sec) [ -23784.7964] [ 4337] [depth= 23] . ( 64 sec) [ -23756.5759] [ 4338] [depth= 19] . ( 64 sec) [ -23756.2652] [ 4338] [depth= 1] . ( 65 sec) [ -23485.3849] [ 4273] [depth= 29] . ( 65 sec) [ -23398.2260] [ 4267] [depth= 25] . ( 65 sec) [ -23289.0799] [ 4267] [depth= 7] . ( 65 sec) [ -23142.3349] [ 4215] [depth= 3] . ( 66 sec) [ -23127.0397] [ 4215] [depth= 2] . ( 66 sec) [ -23108.2874] [ 4215] [depth= 16] . ( 66 sec) [ -22983.4443] [ 4208] [depth= 7] . ( 66 sec) [ -22686.5533] [ 4187] [depth= 6] . ( 67 sec) [ -22566.8018] [ 4186] [depth= 6] . ( 67 sec) [ -22441.1080] [ 4164] [depth= 25] . ( 67 sec) [ -22415.4096] [ 4165] [depth= 4] . ( 68 sec) [ -22281.5368] [ 4140] [depth= 19] . ( 68 sec) [ -22077.9864] [ 4066] [depth= 21] . ( 68 sec) [ -22077.6650] [ 4067] [depth= 1] . ( 68 sec) [ -21991.4507] [ 4051] [depth= 17] . ( 68 sec) [ -21985.7727] [ 4051] [depth= 1] . ( 69 sec) [ -21916.2453] [ 4035] [depth= 10] . ( 69 sec) [ -21878.9843] [ 4026] [depth= 6] . ( 69 sec) [ -21878.2526] [ 4026] [depth= 1] . ( 69 sec) [ -21877.1612] [ 4026] [depth= 1] . ( 70 sec) [ -21851.3934] [ 4022] [depth= 13] . ( 70 sec) [ -21564.9661] [ 3994] [depth= 7] . ( 70 sec) [ -21392.2836] [ 3945] [depth= 8] . ( 71 sec) [ -21332.5769] [ 3924] [depth= 11] . ( 71 sec) [ -21267.0919] [ 3925] [depth= 1] . ( 71 sec) [ -21238.6721] [ 3920] [depth= 6] . ( 71 sec) [ -21210.3455] [ 3912] [depth= 4] . ( 71 sec) [ -21183.5215] [ 3910] [depth= 1] . ( 72 sec) [ -21033.3550] [ 3877] [depth= 23] . ( 72 sec) [ -21023.0865] [ 3868] [depth= 1] . ( 72 sec) [ -20988.2123] [ 3867] [depth= 1] . ( 72 sec) [ -20904.6707] [ 3866] [depth= 20] . ( 72 sec) [ -20876.8488] [ 3852] [depth= 4] . ( 73 sec) [ -20850.5909] [ 3849] [depth= 17] . ( 73 sec) [ -20812.6248] [ 3837] [depth= 24] . ( 73 sec) [ -20812.5727] [ 3838] [depth= 2] . ( 73 sec) [ -20752.7716] [ 3836] [depth= 1] . ( 73 sec) [ -20633.8542] [ 3833] [depth= 9] . ( 74 sec) [ -20598.5238] [ 3832] [depth= 1] . ( 74 sec) [ -20509.8833] [ 3832] [depth= 9] . ( 74 sec) [ -20456.4842] [ 3818] [depth= 19] . ( 74 sec) [ -20413.1591] [ 3876] [depth= 1] . ( 75 sec) [ -20203.6626] [ 3803] [depth= 17] . ( 75 sec) [ -20044.3363] [ 3801] [depth= 15] . ( 75 sec) [ -20041.8553] [ 3803] [depth= 20] . ( 76 sec) [ -19992.7606] [ 3777] [depth= 4] . ( 76 sec) [ -19832.1425] [ 3730] [depth= 8] . ( 76 sec) [ -19699.0313] [ 3697] [depth= 17] . ( 77 sec) [ -19696.2104] [ 3697] [depth= 3] . ( 77 sec) [ -19695.7681] [ 3697] [depth= 1] . ( 77 sec) [ -18921.8891] [ 3700] [depth= 8] . ( 77 sec) [ -18901.1609] [ 3698] [depth= 1] . ( 77 sec) [ -18894.3510] [ 3698] [depth= 1] . ( 78 sec) [ -18882.7924] [ 3692] [depth= 10] . ( 78 sec) [ -18748.8690] [ 3690] [depth= 2] . ( 78 sec) [ -18587.5115] [ 3679] [depth= 13] . ( 78 sec) [ -18528.1674] [ 3680] [depth= 1] . ( 78 sec) [ -18406.8292] [ 3659] [depth= 15] . ( 79 sec) [ -18369.7248] [ 3649] [depth= 22] . ( 80 sec) [ -18364.1766] [ 3648] [depth= 2] . ( 80 sec) [ -18351.3349] [ 3648] [depth= 1] . ( 80 sec) [ -18332.9765] [ 3648] [depth= 2] . ( 80 sec) [ -18275.0282] [ 3621] [depth= 10] . ( 81 sec) [ -18271.6928] [ 3621] [depth= 1] . ( 81 sec) [ -18134.9622] [ 3584] [depth= 8] . ( 81 sec) [ -18090.0969] [ 3571] [depth= 16] . ( 81 sec) [ -18042.3705] [ 3570] [depth= 1] . ( 81 sec) [ -18003.8662] [ 3561] [depth= 1] . ( 82 sec) [ -17984.5786] [ 3556] [depth= 14] . ( 82 sec) [ -17853.2874] [ 3557] [depth= 1] . ( 82 sec) [ -17751.9561] [ 3513] [depth= 14] . ( 83 sec) [ -17744.8602] [ 3516] [depth= 1] . ( 83 sec) [ -17741.5598] [ 3516] [depth= 1] . ( 83 sec) [ -17680.7427] [ 3513] [depth= 2] . ( 83 sec) [ -17582.3943] [ 3500] [depth= 12] . ( 83 sec) [ -17570.4251] [ 3499] [depth= 1] . ( 84 sec) [ -17570.2315] [ 3497] [depth= 8] . ( 84 sec) [ -17548.0625] [ 3497] [depth= 2] . ( 84 sec) [ -17472.9643] [ 3461] [depth= 3] . ( 84 sec) [ -17427.4626] [ 3446] [depth= 12] . ( 85 sec) [ -17419.1817] [ 3420] [depth= 1] . ( 85 sec) [ -17413.6929] [ 3410] [depth= 1] . ( 85 sec) [ -17320.2730] [ 3384] [depth= 8] . ( 85 sec) [ -17271.7563] [ 3383] [depth= 2] . ( 85 sec) [ -17261.5249] [ 3381] [depth= 1] . ( 86 sec) [ -17227.5358] [ 3381] [depth= 3] . ( 86 sec) [ -17130.4271] [ 3332] [depth= 11] . ( 86 sec) [ -16920.2144] [ 3322] [depth= 1] . ( 87 sec) [ -16779.7777] [ 3247] [depth= 1] . ( 87 sec) [ -16375.6100] [ 3201] [depth= 16] . ( 87 sec) [ -16312.6618] [ 3221] [depth= 1] . ( 87 sec) [ -16183.4955] [ 3186] [depth= 7] . ( 87 sec) [ -16177.8342] [ 3171] [depth= 1] . ( 88 sec) [ -16170.5963] [ 3170] [depth= 12] . ( 88 sec) [ -16150.9793] [ 3171] [depth= 1] . ( 88 sec) [ -16147.9319] [ 3169] [depth= 2] . ( 88 sec) [ -16023.9744] [ 3155] [depth= 10] . ( 89 sec) [ -16007.5725] [ 3153] [depth= 2] . ( 89 sec) [ -15903.8444] [ 3125] [depth= 13] . ( 89 sec) [ -15868.7406] [ 3116] [depth= 6] . ( 89 sec) [ -15866.8423] [ 3114] [depth= 3] . ( 90 sec) [ -15866.8164] [ 3114] [depth= 2] . ( 90 sec) [ -15859.5698] [ 3114] [depth= 3] . ( 90 sec) [ -15841.8427] [ 3106] [depth= 2] . ( 90 sec) [ -15815.6707] [ 3106] [depth= 2] . ( 90 sec) [ -15812.3934] [ 3106] [depth= 1] . ( 90 sec) [ -15806.8260] [ 3106] [depth= 1] . ( 91 sec) [ -15797.3159] [ 3104] [depth= 3] . ( 91 sec) [ -15797.0166] [ 3105] [depth= 1] . ( 92 sec) [ -15738.7048] [ 3099] [depth= 2] . ( 92 sec) [ -15671.2767] [ 3080] [depth= 7] . ( 92 sec) [ -15664.9544] [ 3080] [depth= 2] . ( 93 sec) [ -15646.1898] [ 3074] [depth= 14] . ( 93 sec) [ -15640.5210] [ 3078] [depth= 14] . ( 93 sec) [ -15608.5081] [ 3071] [depth= 2] . ( 93 sec) [ -15556.1399] [ 3058] [depth= 8] . ( 94 sec) [ -15441.4848] [ 3019] [depth= 6] . ( 94 sec) [ -15405.1627] [ 3021] [depth= 10] . ( 94 sec) [ -15360.7654] [ 3008] [depth= 5] . ( 94 sec) [ -15360.1699] [ 3009] [depth= 1] . ( 94 sec) [ -15351.8931] [ 3008] [depth= 1] . ( 95 sec) [ -15349.2925] [ 3008] [depth= 1] . ( 95 sec) [ -15348.8332] [ 3008] [depth= 1] . ( 95 sec) [ -15340.1968] [ 3008] [depth= 6] . ( 95 sec) [ -15268.8374] [ 2995] [depth= 11] . ( 96 sec) [ -15263.4986] [ 2995] [depth= 1] . ( 96 sec) [ -15222.2307] [ 2988] [depth= 3] . ( 96 sec) [ -15189.4958] [ 2980] [depth= 8] . ( 96 sec) [ -15178.6990] [ 2979] [depth= 2] . ( 97 sec) [ -15171.2447] [ 2957] [depth= 7] . ( 97 sec) [ -15151.2709] [ 2957] [depth= 1] . ( 97 sec) [ -14934.7670] [ 2911] [depth= 10] . ( 97 sec) [ -14885.2890] [ 2900] [depth= 13] . ( 97 sec) [ -14821.3481] [ 2890] [depth= 3] . ( 98 sec) [ -14816.9135] [ 2890] [depth= 1] . ( 98 sec) [ -14815.8680] [ 2890] [depth= 1] . ( 98 sec) [ -14815.7442] [ 2891] [depth= 1] . ( 98 sec) [ -14812.9676] [ 2893] [depth= 1] . ( 99 sec) [ -14791.3901] [ 2892] [depth= 1] . ( 99 sec) [ -14638.5921] [ 2848] [depth= 16] . ( 99 sec) [ -14632.0043] [ 2847] [depth= 3] . ( 100 sec) [ -14630.7602] [ 2847] [depth= 2] . ( 100 sec) [ -14628.5074] [ 2847] [depth= 1] . ( 101 sec) [ -14625.5477] [ 2847] [depth= 5] . ( 101 sec) [ -14622.0570] [ 2847] [depth= 7] . ( 101 sec) [ -14620.9724] [ 2847] [depth= 2] . ( 101 sec) [ -14620.3546] [ 2847] [depth= 1] . ( 102 sec) [ -14615.3817] [ 2847] [depth= 1] . ( 102 sec) [ -14500.3560] [ 2798] [depth= 19] . ( 102 sec) [ -14499.7962] [ 2798] [depth= 2] . ( 102 sec) [ -14377.4125] [ 2780] [depth= 10] . ( 103 sec) [ -14362.4622] [ 2780] [depth= 1] . ( 103 sec) [ -14360.1748] [ 2780] [depth= 1] . ( 103 sec) [ -14358.2519] [ 2781] [depth= 1] . ( 103 sec) [ -14357.4640] [ 2784] [depth= 1] . ( 104 sec) [ -14322.1304] [ 2778] [depth= 6] . ( 104 sec) [ -14277.4427] [ 2777] [depth= 1] . ( 104 sec) [ -14276.7078] [ 2761] [depth= 3] . ( 104 sec) [ -14245.0106] [ 2760] [depth= 1] . ( 105 sec) [ -14227.6637] [ 2743] [depth= 6] . ( 105 sec) [ -14206.4047] [ 2742] [depth= 8] . ( 105 sec) [ -14170.8809] [ 2743] [depth= 11] . ( 105 sec) [ -14169.4539] [ 2743] [depth= 3] . ( 106 sec) [ -14135.9545] [ 2735] [depth= 6] . ( 106 sec) [ -14128.8532] [ 2734] [depth= 21] . ( 106 sec) [ -14108.0265] [ 2714] [depth= 8] . ( 106 sec) [ -14106.7323] [ 2715] [depth= 1] . ( 106 sec) [ -14086.5855] [ 2710] [depth= 11] . ( 107 sec) [ -14075.6651] [ 2703] [depth= 1] . ( 107 sec) [ -14025.6470] [ 2695] [depth= 11] . ( 107 sec) [ -13933.1969] [ 2678] [depth= 3] . ( 107 sec) [ -13866.3568] [ 2660] [depth= 13] . ( 107 sec) [ -13850.7943] [ 2659] [depth= 6] . ( 108 sec) [ -13847.2059] [ 2659] [depth= 3] . ( 108 sec) [ -13846.7504] [ 2658] [depth= 1] . ( 109 sec) [ -13844.4269] [ 2658] [depth= 4] . ( 109 sec) [ -13825.1250] [ 2663] [depth= 6] . ( 109 sec) [ -13813.2477] [ 2659] [depth= 1] . ( 110 sec) [ -13761.8075] [ 2646] [depth= 4] . ( 110 sec) [ -13744.5339] [ 2645] [depth= 3] . ( 110 sec) [ -13631.8888] [ 2616] [depth= 3] . ( 110 sec) [ -13630.0250] [ 2613] [depth= 3] . ( 111 sec) [ -13602.5734] [ 2612] [depth= 4] . ( 111 sec) [ -13578.1844] [ 2610] [depth= 1] . ( 111 sec) [ -13467.5508] [ 2583] [depth= 11] . ( 112 sec) [ -13442.9696] [ 2583] [depth= 1] . ( 112 sec) [ -13270.9695] [ 2543] [depth= 15] . ( 112 sec) [ -13265.0295] [ 2541] [depth= 1] . ( 114 sec) [ -13257.7120] [ 2541] [depth= 1] . ( 114 sec) [ -13254.9776] [ 2541] [depth= 1] . ( 115 sec) [ -13254.7068] [ 2541] [depth= 1] . ( 115 sec) [ -13241.7020] [ 2539] [depth= 1] . ( 115 sec) [ -13241.1908] [ 2539] [depth= 9] . ( 115 sec) [ -13240.7988] [ 2539] [depth= 1] . ( 116 sec) [ -13239.7120] [ 2539] [depth= 1] . ( 116 sec) [ -13239.6757] [ 2539] [depth= 1] . ( 116 sec) [ -13182.1692] [ 2531] [depth= 1] . ( 116 sec) [ -13180.6577] [ 2531] [depth= 2] . ( 117 sec) [ -13046.4422] [ 2487] [depth= 11] . ( 118 sec) [ -13021.8848] [ 2454] [depth= 1] . ( 119 sec) [ -13016.2368] [ 2455] [depth= 1] . ( 119 sec) [ -13015.9582] [ 2455] [depth= 1] . ( 119 sec) [ -13009.9124] [ 2456] [depth= 1] . ( 119 sec) [ -13005.3819] [ 2456] [depth= 4] . ( 120 sec) [ -12940.7476] [ 2440] [depth= 1] . ( 120 sec) [ -12938.5355] [ 2437] [depth= 3] . ( 120 sec) [ -12933.6977] [ 2431] [depth= 2] . ( 120 sec) [ -12899.6011] [ 2417] [depth= 1] . ( 120 sec) [ -12838.3498] [ 2402] [depth= 5] . ( 121 sec) [ -12834.7452] [ 2406] [depth= 5] . ( 122 sec) [ -12780.3734] [ 2389] [depth= 4] . ( 122 sec) [ -12740.4451] [ 2392] [depth= 1] . ( 122 sec) [ -12727.2556] [ 2394] [depth= 2] . ( 122 sec) [ -12626.2293] [ 2373] [depth= 17] . ( 122 sec) [ -12619.6936] [ 2371] [depth= 1] . ( 123 sec) [ -12615.2252] [ 2370] [depth= 2] . ( 123 sec) [ -12597.3410] [ 2370] [depth= 1] . ( 123 sec) [ -12534.0908] [ 2352] [depth= 12] . ( 123 sec) [ -12480.8926] [ 2348] [depth= 5] . ( 124 sec) [ -12468.7764] [ 2349] [depth= 1] . ( 124 sec) [ -12464.1104] [ 2347] [depth= 3] . ( 124 sec) [ -12463.8647] [ 2347] [depth= 1] . ( 124 sec) [ -12445.5128] [ 2341] [depth= 9] . ( 125 sec) [ -12440.4715] [ 2343] [depth= 2] . ( 125 sec) [ -12402.3348] [ 2308] [depth= 10] . ( 125 sec) [ -12378.0814] [ 2307] [depth= 6] . ( 127 sec) [ -11938.5670] [Branch lengths ] . ( 135 sec) [ -11845.2537] [GTR parameters ] . ( 135 sec) [ -11840.2805] [Alpha ][ 0.426648] . ( 136 sec) [ -11840.1842] [ 2307] [depth= 2] . ( 136 sec) [ -11837.8043] [ 2307] [depth= 1] . ( 137 sec) [ -11830.0025] [ 2306] [depth= 1] . ( 137 sec) [ -11829.0820] [ 2302] [depth= 1] . ( 137 sec) [ -11828.8777] [ 2302] [depth= 1] . ( 139 sec) [ -11828.8630] [ 2302] [depth= 1] . ( 140 sec) [ -11762.5055] [ 2273] [depth= 8] . ( 141 sec) [ -11753.5224] [ 2272] [depth= 21] . ( 142 sec) [ -11753.0217] [ 2270] [depth= 1] . ( 143 sec) [ -11748.9486] [ 2268] [depth= 1] . ( 144 sec) [ -11748.7800] [ 2268] [depth= 1] . ( 145 sec) [ -11748.6512] [ 2269] [depth= 1] . ( 145 sec) [ -11748.6404] [ 2269] [depth= 1] . ( 146 sec) [ -11748.5901] [ 2269] [depth= 3] . ( 148 sec) [ -11748.5697] [ 2269] [depth= 2] . ( 148 sec) [ -11748.5515] [ 2268] [depth= 4] . ( 149 sec) [ -11748.0003] [ 2266] [depth= 1] . ( 149 sec) [ -11743.4146] [ 2265] [depth= 2] . ( 150 sec) [ -11742.1070] [ 2268] [depth= 5] . ( 151 sec) [ -11740.2012] [ 2268] [depth= 8] . ( 152 sec) [ -11733.6628] [ 2267] [depth= 2] . ( 152 sec) [ -11731.0274] [ 2266] [depth= 1] . ( 152 sec) [ -11716.3553] [ 2258] [depth= 1] . ( 154 sec) [ -11659.3534] [ 2244] [depth= 20] . ( 154 sec) [ -11653.8092] [ 2243] [depth= 1] . ( 155 sec) [ -11650.5173] [ 2242] [depth= 7] . ( 155 sec) [ -11647.3914] [ 2241] [depth= 2] . ( 156 sec) [ -11640.9304] [ 2239] [depth= 2] . ( 156 sec) [ -11640.8816] [ 2239] [depth= 1] . ( 156 sec) [ -11520.4730] [ 2194] [depth= 2] . ( 160 sec) [ -11514.8021] [ 2190] [depth= 4] . ( 161 sec) [ -11496.5644] [ 2186] [depth= 7] . ( 163 sec) [ -11487.1045] [ 2189] [depth= 1] . ( 163 sec) [ -11326.8037] [ 2141] [depth= 5] . ( 164 sec) [ -11326.4039] [ 2140] [depth= 1] . ( 164 sec) [ -11324.0156] [ 2140] [depth= 1] . ( 165 sec) [ -11323.9587] [ 2140] [depth= 1] . ( 168 sec) [ -11318.0048] [ 2142] [depth= 1] . ( 173 sec) [ -11317.8930] [ 2143] [depth= 2] . ( 174 sec) [ -11317.8702] [ 2143] [depth= 2] . ( 174 sec) [ -11310.8853] [ 2142] [depth= 3] . ( 174 sec) [ -11310.7181] [ 2141] [depth= 1] . ( 175 sec) [ -11310.6976] [ 2141] [depth= 1] . ( 177 sec) [ -11306.6084] [ 2141] [depth= 2] . ( 177 sec) [ -11305.9404] [ 2141] [depth= 1] . ( 179 sec) [ -11304.9630] [ 2141] [depth= 1] . ( 180 sec) [ -11303.9533] [ 2141] [depth= 2] . ( 181 sec) [ -11299.4741] [ 2141] [depth= 2] . ( 181 sec) [ -11272.4510] [ 2103] [depth= 20] . ( 181 sec) [ -11269.8996] [ 2101] [depth= 2] . ( 183 sec) [ -11240.7366] [ 2074] [depth= 10] . ( 184 sec) [ -11240.5345] [ 2074] [depth= 3] . ( 186 sec) [ -11240.5213] [ 2074] [depth= 2] . ( 187 sec) [ -11237.0144] [ 2073] [depth= 1] . ( 187 sec) [ -11202.4401] [ 2061] [depth= 2] . ( 189 sec) [ -11202.2099] [ 2061] [depth= 1] . ( 192 sec) [ -11195.9511] [ 2061] [depth= 5] . ( 194 sec) [ -11186.2642] [ 2053] [depth= 5] . ( 194 sec) [ -11185.9257] [ 2054] [depth= 2] . ( 197 sec) [ -11175.5004] [ 2043] [depth= 6] . ( 197 sec) [ -11032.0461] [ 1994] [depth= 18] . ( 197 sec) [ -11030.9896] [ 1995] [depth= 1] . ( 197 sec) [ -10944.8236] [ 1960] [depth= 21] . ( 198 sec) [ -10944.7878] [ 1960] [depth= 4] . ( 198 sec) [ -10786.1113] [ 1924] [depth= 10] . ( 198 sec) [ -10778.4814] [ 1921] [depth= 3] . ( 199 sec) [ -10777.1264] [ 1921] [depth= 1] . ( 199 sec) [ -10776.9561] [ 1921] [depth= 1] . ( 199 sec) [ -10776.8954] [ 1921] [depth= 2] . ( 199 sec) [ -10774.6377] [ 1920] [depth= 1] . ( 200 sec) [ -10769.9279] [ 1919] [depth= 3] . ( 200 sec) [ -10769.7612] [ 1919] [depth= 1] . ( 200 sec) [ -10767.9615] [ 1919] [depth= 1] . ( 202 sec) [ -10766.6838] [ 1918] [depth= 1] . ( 202 sec) [ -10766.1317] [ 1918] [depth= 2] . ( 206 sec) [ -10766.0542] [ 1918] [depth= 4] . ( 206 sec) [ -10765.3726] [ 1918] [depth= 1] . ( 208 sec) [ -10765.2049] [ 1918] [depth= 1] . ( 208 sec) [ -10764.7595] [ 1918] [depth= 1] . ( 209 sec) [ -10738.8419] [ 1913] [depth= 1] . ( 211 sec) [ -10738.5714] [ 1913] [depth= 5] . ( 212 sec) [ -10738.3386] [ 1913] [depth= 3] . ( 215 sec) [ -10726.8510] [ 1912] [depth= 3] . ( 216 sec) [ -10723.2349] [ 1911] [depth= 1] . ( 216 sec) [ -10723.1821] [ 1911] [depth= 3] . ( 216 sec) [ -10723.1629] [ 1911] [depth= 1] . ( 216 sec) [ -10723.1073] [ 1911] [depth= 2] . ( 217 sec) [ -10704.2774] [ 1908] [depth= 5] . ( 218 sec) [ -10704.2488] [ 1908] [depth= 1] . ( 218 sec) [ -10699.8958] [ 1907] [depth= 1] . ( 219 sec) [ -10699.2940] [ 1907] [depth= 1] . ( 220 sec) [ -10699.0434] [ 1907] [depth= 1] . ( 220 sec) [ -10698.4773] [ 1907] [depth= 2] . ( 220 sec) [ -10698.4109] [ 1906] [depth= 1] . ( 221 sec) [ -10694.9001] [ 1906] [depth= 1] . ( 223 sec) [ -10692.2994] [ 1904] [depth= 1] . ( 223 sec) [ -10692.2571] [ 1904] [depth= 2] . ( 224 sec) [ -10692.1635] [ 1904] [depth= 1] . ( 225 sec) [ -10692.0794] [ 1904] [depth= 1] . ( 225 sec) [ -10689.1331] [ 1906] [depth= 5] . ( 228 sec) [ -10689.0945] [ 1906] [depth= 1] . ( 229 sec) [ -10682.4505] [ 1904] [depth= 1] . ( 230 sec) [ -10682.3593] [ 1904] [depth= 3] . ( 231 sec) [ -10681.2034] [ 1903] [depth= 3] . ( 232 sec) [ -10681.1711] [ 1903] [depth= 4] . ( 239 sec) [ -10681.0485] [ 1907] [depth= 1] . ( 239 sec) [ -10672.5057] [ 1905] [depth= 1] . ( 239 sec) [ -10667.3149] [ 1900] [depth= 3] . ( 241 sec) [ -10667.2855] [ 1900] [depth= 1] . ( 241 sec) [ -10665.3530] [ 1899] [depth= 1] . ( 246 sec) [ -10641.2525] [ 1893] [depth= 3] . ( 247 sec) [ -10641.0992] [ 1893] [depth= 2] . ( 250 sec) [ -10640.9810] [ 1893] [depth= 1] . ( 253 sec) [ -10636.6250] [ 1890] [depth= 1] . ( 254 sec) [ -10635.8783] [ 1891] [depth= 1] . ( 255 sec) [ -10635.5543] [ 1892] [depth= 1] . ( 256 sec) [ -10630.4637] [ 1892] [depth= 1] . ( 257 sec) [ -10629.3010] [ 1893] [depth= 1] . ( 258 sec) [ -10628.6236] [ 1893] [depth= 1] . ( 258 sec) [ -10627.3557] [ 1891] [depth= 2] . ( 259 sec) [ -10627.0938] [ 1891] [depth= 1] . ( 260 sec) [ -10626.8088] [ 1891] [depth= 1] . ( 263 sec) [ -10587.8318] [Branch lengths ] . ( 266 sec) [ -10586.9387] [GTR parameters ] . ( 267 sec) [ -10583.5213] [Alpha ][ 0.493736] . ( 269 sec) [ -10583.5038] [ 1890] [depth= 1] . ( 269 sec) [ -10582.6224] [ 1890] [depth= 5] . ( 274 sec) [ -10581.5952] [ 1889] [depth= 1] . ( 277 sec) [ -10581.4551] [ 1889] [depth= 2] . ( 279 sec) [ -10581.2896] [ 1890] [depth= 1] . ( 279 sec) [ -10581.1987] [ 1890] [depth= 1] . ( 281 sec) [ -10581.1844] [ 1890] [depth= 3] . ( 289 sec) [ -10581.0994] [ 1890] [depth= 1] . ( 292 sec) [ -10581.0785] [ 1890] [depth= 2] . ( 302 sec) [ -10580.7625] [ 1889] [depth= 2] . ( 309 sec) [ -10580.5987] [ 1889] [depth= 3] . ( 317 sec) [ -10580.5870] [ 1889] [depth= 3] . ( 322 sec) [ -10580.5552] [ 1889] [depth= 3] . ( 330 sec) [ -10580.4946] [ 1889] [depth= 3] . ( 340 sec) [ -10571.8378] [ 1887] [depth= 3] . ( 342 sec) [ -10571.5316] [ 1887] [depth= 1] . ( 342 sec) [ -10571.0360] [ 1887] [depth= 1] . ( 346 sec) [ -10568.0744] [ 1887] [depth= 1] . ( 347 sec) [ -10567.9708] [ 1887] [depth= 1] . ( 360 sec) [ -10567.9329] [ 1887] [depth= 3] . ( 386 sec) [ -10567.8095] [ 1887] [depth= 2] . ( 389 sec) [ -10566.2317] [ 1890] [depth= 1] . ( 408 sec) [ -10566.2186] [ 1890] [depth= 1] . ( 416 sec) [ -10559.7261] [Branch lengths ] . ( 417 sec) [ -10559.7141] [GTR parameters ] . ( 418 sec) [ -10559.7120] [Alpha ][ 0.495601] . ( 459 sec) [ -10559.7008] [ 1890] [depth= 1] . ( 523 sec) [ -10559.6900] [ 1890] [depth= 2] . ( 567 sec) [ -10557.9746] [Branch lengths ] . ( 568 sec) [ -10557.9722] [GTR parameters ] . ( 568 sec) [ -10557.9719] [Alpha ][ 0.496287] . ( 719 sec) [ -10557.0715] [Branch lengths ] . ( 725 sec) [ -10557.0148] [ 1890] [depth= 4] . ( 823 sec) [ -10556.9989] [ 1890] [depth= 3] . ( 968 sec) [ -10555.0725] [Branch lengths ] . ( 970 sec) [ -10555.0658] [GTR parameters ] . ( 970 sec) [ -10555.0649] [Alpha ][ 0.497524] . ( 1236 sec) [ -10554.8456] [Branch lengths ] . ( 1237 sec) [ -10554.8456] [Topology ] . ( 1241 sec) [ -10554.8397] [Topology ] . ( 1246 sec) [ -10554.8370] [Topology ] . ( 1252 sec) [ -10554.8354] [Topology ] . ( 1257 sec) [ -10554.8343] [Topology ] . ( 1262 sec) [ -10554.8335] [Topology ] . ( 1263 sec) [ -10554.8331] [GTR parameters ] . ( 1263 sec) [ -10554.8331] [Alpha ][ 0.497524] . ( 1263 sec) [ -10554.8331] [Topology ] . ( 1268 sec) [ -10554.8326] [Topology ] . ( 1269 sec) [ -10554.8325] [GTR parameters ] . ( 1269 sec) [ -10554.8325] [Alpha ][ 0.497524] . Checking for NNIs, optimizing five branches... . ( 1302 sec) [ -10554.7946] [Topology ] . Checking for NNIs, optimizing five branches... . ( 1334 sec) [ -10554.7945] [Topology ] . Checking for NNIs, optimizing five branches... . ( 1366 sec) [ -10554.7887] [Topology ] . Checking for NNIs, optimizing five branches... . Log likelihood of the current tree: -10554.788739. . [Random start 2/ 5] . Computing pairwise distances... . Building BioNJ tree... . Randomising the tree... . Maximizing likelihood (using SPR moves)... . ( 5 sec) [ -54302.4190] [GTR parameters ] . ( 6 sec) [ -53044.4021] [Alpha ][ 0.500960] . ( 6 sec) [ -52640.5353] [ 7314] [depth= 14] . ( 6 sec) [ -51829.3511] [ 7222] [depth= 7] . ( 6 sec) [ -51685.9232] [ 7205] [depth= 10] . ( 7 sec) [ -51554.8412] [ 7191] [depth= 1] . ( 7 sec) [ -51355.3066] [ 7188] [depth= 11] . ( 7 sec) [ -50931.1782] [ 7169] [depth= 4] . ( 7 sec) [ -50555.8628] [ 7165] [depth= 14] . ( 7 sec) [ -50410.2686] [ 7107] [depth= 2] . ( 8 sec) [ -50212.1769] [ 7093] [depth= 7] . ( 8 sec) [ -49862.8692] [ 7091] [depth= 2] . ( 8 sec) [ -49659.1027] [ 7085] [depth= 6] . ( 8 sec) [ -49459.8958] [ 7068] [depth= 3] . ( 8 sec) [ -49283.9812] [ 7068] [depth= 9] . ( 9 sec) [ -49247.5210] [ 7068] [depth= 6] . ( 9 sec) [ -49077.9787] [ 7064] [depth= 4] . ( 9 sec) [ -48967.3668] [ 7060] [depth= 12] . ( 9 sec) [ -48872.3667] [ 7058] [depth= 9] . ( 10 sec) [ -48341.7864] [ 7042] [depth= 11] . ( 10 sec) [ -48118.0432] [ 7040] [depth= 1] . ( 10 sec) [ -47623.6185] [ 6995] [depth= 18] . ( 10 sec) [ -47375.9419] [ 7002] [depth= 1] . ( 10 sec) [ -46886.9306] [ 7000] [depth= 1] . ( 11 sec) [ -46874.8358] [ 6960] [depth= 32] . ( 11 sec) [ -46806.6539] [ 6950] [depth= 21] . ( 11 sec) [ -46338.9249] [ 6947] [depth= 23] . ( 11 sec) [ -45908.2523] [ 6877] [depth= 11] . ( 12 sec) [ -45849.7033] [ 6849] [depth= 2] . ( 12 sec) [ -45735.6009] [ 6843] [depth= 33] . ( 12 sec) [ -45400.2897] [ 6781] [depth= 28] . ( 13 sec) [ -45292.8891] [ 6754] [depth= 15] . ( 13 sec) [ -45155.7524] [ 6738] [depth= 3] . ( 13 sec) [ -44870.1040] [ 6735] [depth= 9] . ( 13 sec) [ -44581.9448] [ 6672] [depth= 11] . ( 14 sec) [ -44386.9203] [ 6647] [depth= 19] . ( 14 sec) [ -44327.6316] [ 6644] [depth= 2] . ( 14 sec) [ -44107.4391] [ 6638] [depth= 14] . ( 14 sec) [ -44008.9358] [ 6637] [depth= 2] . ( 15 sec) [ -42268.5584] [ 6583] [depth= 26] . ( 15 sec) [ -42160.8426] [ 6584] [depth= 1] . ( 15 sec) [ -41978.4504] [ 6580] [depth= 1] . ( 15 sec) [ -41955.2047] [ 6577] [depth= 12] . ( 15 sec) [ -41787.6786] [ 6564] [depth= 14] . ( 16 sec) [ -41732.7417] [ 6558] [depth= 15] . ( 16 sec) [ -41501.0998] [ 6529] [depth= 1] . ( 16 sec) [ -41135.4364] [ 6478] [depth= 19] . ( 16 sec) [ -41094.4422] [ 6468] [depth= 17] . ( 17 sec) [ -41040.0358] [ 6465] [depth= 1] . ( 17 sec) [ -40890.3009] [ 6428] [depth= 32] . ( 17 sec) [ -40511.7501] [ 6401] [depth= 8] . ( 17 sec) [ -40325.5550] [ 6358] [depth= 3] . ( 18 sec) [ -40216.1130] [ 6332] [depth= 18] . ( 18 sec) [ -39877.4179] [ 6274] [depth= 13] . ( 18 sec) [ -39743.8222] [ 6278] [depth= 1] . ( 18 sec) [ -39658.9151] [ 6262] [depth= 4] . ( 19 sec) [ -39653.8763] [ 6261] [depth= 28] . ( 19 sec) [ -39528.9023] [ 6261] [depth= 10] . ( 19 sec) [ -38618.2271] [ 6211] [depth= 30] . ( 19 sec) [ -38585.6452] [ 6179] [depth= 1] . ( 20 sec) [ -38258.6007] [ 6152] [depth= 14] . ( 20 sec) [ -38068.5833] [ 6133] [depth= 7] . ( 20 sec) [ -37972.9309] [ 6133] [depth= 1] . ( 20 sec) [ -37441.7070] [ 6107] [depth= 3] . ( 21 sec) [ -37347.0013] [ 6107] [depth= 1] . ( 21 sec) [ -37165.5561] [ 6107] [depth= 1] . ( 21 sec) [ -37165.3146] [ 6107] [depth= 1] . ( 21 sec) [ -37125.9389] [ 6086] [depth= 13] . ( 22 sec) [ -36934.6558] [ 6066] [depth= 27] . ( 22 sec) [ -35006.9027] [ 6013] [depth= 1] . ( 22 sec) [ -34804.5337] [ 5978] [depth= 8] . ( 22 sec) [ -34747.6762] [ 5970] [depth= 2] . ( 22 sec) [ -34651.0690] [ 5971] [depth= 1] . ( 23 sec) [ -34557.9714] [ 5954] [depth= 9] . ( 23 sec) [ -34513.5777] [ 5961] [depth= 1] . ( 23 sec) [ -34224.6870] [ 5930] [depth= 25] . ( 23 sec) [ -34186.3887] [ 5934] [depth= 1] . ( 24 sec) [ -34024.5499] [ 5896] [depth= 3] . ( 24 sec) [ -33864.8322] [ 5871] [depth= 17] . ( 24 sec) [ -33864.1868] [ 5875] [depth= 1] . ( 24 sec) [ -33784.9804] [ 5849] [depth= 14] . ( 25 sec) [ -33593.4570] [ 5819] [depth= 2] . ( 25 sec) [ -33357.6660] [ 5803] [depth= 22] . ( 25 sec) [ -32812.9518] [ 5762] [depth= 16] . ( 25 sec) [ -32727.7680] [ 5763] [depth= 17] . ( 26 sec) [ -32639.4536] [ 5754] [depth= 16] . ( 26 sec) [ -32467.0728] [ 5729] [depth= 2] . ( 26 sec) [ -32441.4172] [ 5730] [depth= 1] . ( 26 sec) [ -32358.3599] [ 5718] [depth= 17] . ( 26 sec) [ -32202.6264] [ 5674] [depth= 8] . ( 27 sec) [ -32183.9881] [ 5685] [depth= 1] . ( 27 sec) [ -32099.6846] [ 5670] [depth= 6] . ( 27 sec) [ -32089.5023] [ 5659] [depth= 1] . ( 27 sec) [ -31961.8115] [ 5652] [depth= 27] . ( 28 sec) [ -31669.3841] [ 5627] [depth= 13] . ( 28 sec) [ -31666.3800] [ 5631] [depth= 2] . ( 28 sec) [ -31596.6582] [ 5623] [depth= 27] . ( 28 sec) [ -31482.3732] [ 5592] [depth= 23] . ( 29 sec) [ -31269.1089] [ 5564] [depth= 31] . ( 29 sec) [ -31156.8824] [ 5545] [depth= 3] . ( 29 sec) [ -31029.0093] [ 5532] [depth= 12] . ( 30 sec) [ -31021.5215] [ 5529] [depth= 22] . ( 30 sec) [ -30763.8655] [ 5507] [depth= 14] . ( 30 sec) [ -30495.8941] [ 5473] [depth= 15] . ( 30 sec) [ -30267.6639] [ 5460] [depth= 11] . ( 31 sec) [ -30161.4582] [ 5426] [depth= 9] . ( 31 sec) [ -30111.4554] [ 5425] [depth= 1] . ( 31 sec) [ -30104.1491] [ 5425] [depth= 1] . ( 31 sec) [ -30099.0032] [ 5426] [depth= 1] . ( 32 sec) [ -29910.5115] [ 5366] [depth= 5] . ( 32 sec) [ -29907.3547] [ 5366] [depth= 1] . ( 32 sec) [ -29555.6215] [ 5330] [depth= 22] . ( 32 sec) [ -29393.9623] [ 5324] [depth= 7] . ( 33 sec) [ -29102.4024] [ 5296] [depth= 1] . ( 33 sec) [ -28967.2155] [ 5247] [depth= 20] . ( 33 sec) [ -28815.6951] [ 5222] [depth= 17] . ( 33 sec) [ -28747.0112] [ 5221] [depth= 2] . ( 34 sec) [ -28677.2795] [ 5209] [depth= 6] . ( 34 sec) [ -28676.7547] [ 5209] [depth= 1] . ( 34 sec) [ -28651.3239] [ 5205] [depth= 5] . ( 34 sec) [ -28645.3419] [ 5204] [depth= 2] . ( 34 sec) [ -28611.6469] [ 5186] [depth= 12] . ( 35 sec) [ -28534.6724] [ 5187] [depth= 1] . ( 35 sec) [ -28466.4994] [ 5180] [depth= 2] . ( 35 sec) [ -28278.2732] [ 5137] [depth= 12] . ( 35 sec) [ -27922.9658] [ 5094] [depth= 10] . ( 36 sec) [ -27908.8680] [ 5095] [depth= 2] . ( 36 sec) [ -27807.0010] [ 5077] [depth= 4] . ( 36 sec) [ -27756.1760] [ 5075] [depth= 1] . ( 36 sec) [ -27665.1550] [ 5030] [depth= 9] . ( 36 sec) [ -27663.8467] [ 5029] [depth= 1] . ( 37 sec) [ -27657.3525] [ 5030] [depth= 1] . ( 37 sec) [ -27653.3612] [ 5030] [depth= 1] . ( 37 sec) [ -27653.2176] [ 5030] [depth= 1] . ( 37 sec) [ -27434.3538] [ 4989] [depth= 18] . ( 38 sec) [ -27429.6403] [ 4988] [depth= 1] . ( 38 sec) [ -27310.0935] [ 4961] [depth= 15] . ( 38 sec) [ -27215.3902] [ 4962] [depth= 5] . ( 38 sec) [ -27200.0255] [ 4962] [depth= 2] . ( 39 sec) [ -27031.1278] [ 4967] [depth= 3] . ( 39 sec) [ -26884.4555] [ 4924] [depth= 6] . ( 39 sec) [ -26881.7688] [ 4923] [depth= 4] . ( 39 sec) [ -26852.3318] [ 4919] [depth= 12] . ( 40 sec) [ -26829.4192] [ 4924] [depth= 1] . ( 40 sec) [ -26781.8581] [ 4924] [depth= 1] . ( 40 sec) [ -26528.4454] [ 4881] [depth= 18] . ( 40 sec) [ -26371.0987] [ 4871] [depth= 16] . ( 40 sec) [ -26196.4632] [ 4837] [depth= 15] . ( 41 sec) [ -26139.9587] [ 4812] [depth= 26] . ( 41 sec) [ -25797.3537] [ 4770] [depth= 11] . ( 41 sec) [ -25712.6553] [ 4767] [depth= 8] . ( 42 sec) [ -25703.6905] [ 4768] [depth= 2] . ( 42 sec) [ -25673.9779] [ 4766] [depth= 6] . ( 42 sec) [ -25673.9125] [ 4766] [depth= 2] . ( 42 sec) [ -25577.9865] [ 4745] [depth= 18] . ( 43 sec) [ -25270.2221] [ 4716] [depth= 8] . ( 43 sec) [ -25242.8470] [ 4713] [depth= 15] . ( 43 sec) [ -24997.3747] [ 4656] [depth= 15] . ( 43 sec) [ -24764.2180] [ 4643] [depth= 12] . ( 44 sec) [ -24744.8163] [ 4643] [depth= 16] . ( 44 sec) [ -24743.6566] [ 4643] [depth= 2] . ( 44 sec) [ -24597.7107] [ 4598] [depth= 15] . ( 44 sec) [ -24583.9305] [ 4598] [depth= 1] . ( 44 sec) [ -24439.3941] [ 4560] [depth= 3] . ( 45 sec) [ -24424.6007] [ 4555] [depth= 10] . ( 45 sec) [ -24354.2217] [ 4515] [depth= 6] . ( 45 sec) [ -23873.2238] [ 4513] [depth= 1] . ( 45 sec) [ -23869.1431] [ 4513] [depth= 1] . ( 46 sec) [ -23716.9309] [ 4464] [depth= 11] . ( 46 sec) [ -23476.3856] [ 4464] [depth= 4] . ( 46 sec) [ -23256.2118] [ 4413] [depth= 12] . ( 46 sec) [ -23228.0833] [ 4413] [depth= 1] . ( 46 sec) [ -23104.1069] [ 4408] [depth= 14] . ( 47 sec) [ -23009.9262] [ 4389] [depth= 18] . ( 47 sec) [ -22909.0882] [ 4368] [depth= 18] . ( 47 sec) [ -22694.4873] [ 4322] [depth= 7] . ( 47 sec) [ -22666.8599] [ 4320] [depth= 17] . ( 48 sec) [ -22550.2714] [ 4320] [depth= 16] . ( 48 sec) [ -22537.4818] [ 4316] [depth= 8] . ( 48 sec) [ -22523.1717] [ 4316] [depth= 8] . ( 48 sec) [ -22518.1444] [ 4318] [depth= 14] . ( 49 sec) [ -22516.2494] [ 4318] [depth= 12] . ( 49 sec) [ -22509.6003] [ 4318] [depth= 2] . ( 49 sec) [ -22387.5276] [ 4300] [depth= 11] . ( 49 sec) [ -22385.4233] [ 4300] [depth= 1] . ( 50 sec) [ -22197.5277] [ 4239] [depth= 14] . ( 50 sec) [ -22024.3672] [ 4216] [depth= 4] . ( 50 sec) [ -21973.1792] [ 4217] [depth= 3] . ( 50 sec) [ -21911.6474] [ 4204] [depth= 24] . ( 51 sec) [ -21890.8987] [ 4204] [depth= 13] . ( 51 sec) [ -21879.7739] [ 4202] [depth= 3] . ( 51 sec) [ -21764.6418] [ 4174] [depth= 9] . ( 51 sec) [ -21692.8290] [ 4162] [depth= 13] . ( 52 sec) [ -21691.1037] [ 4162] [depth= 1] . ( 52 sec) [ -21674.3353] [ 4162] [depth= 2] . ( 52 sec) [ -21554.4922] [ 4124] [depth= 24] . ( 52 sec) [ -21408.2909] [ 4106] [depth= 14] . ( 53 sec) [ -21394.6773] [ 4104] [depth= 17] . ( 53 sec) [ -21391.1157] [ 4108] [depth= 1] . ( 53 sec) [ -21382.8768] [ 4105] [depth= 1] . ( 53 sec) [ -21381.9242] [ 4105] [depth= 2] . ( 54 sec) [ -21345.1226] [ 4089] [depth= 13] . ( 54 sec) [ -21202.6738] [ 4048] [depth= 23] . ( 54 sec) [ -21149.1610] [ 4048] [depth= 2] . ( 54 sec) [ -21147.2497] [ 4048] [depth= 19] . ( 54 sec) [ -21064.2835] [ 4038] [depth= 21] . ( 55 sec) [ -21059.1703] [ 4037] [depth= 1] . ( 55 sec) [ -21011.2235] [ 4028] [depth= 2] . ( 55 sec) [ -20978.8670] [ 4022] [depth= 12] . ( 56 sec) [ -20933.7575] [ 4018] [depth= 17] . ( 56 sec) [ -20927.9386] [ 4017] [depth= 10] . ( 56 sec) [ -20925.9852] [ 4017] [depth= 3] . ( 56 sec) [ -20845.5549] [ 4020] [depth= 23] . ( 57 sec) [ -20826.9071] [ 4022] [depth= 11] . ( 57 sec) [ -20753.2280] [ 4016] [depth= 18] . ( 57 sec) [ -20749.7870] [ 4016] [depth= 2] . ( 58 sec) [ -20746.0292] [ 4018] [depth= 23] . ( 58 sec) [ -20723.6407] [ 4011] [depth= 2] . ( 58 sec) [ -20643.5933] [ 4011] [depth= 18] . ( 58 sec) [ -20635.4916] [ 4011] [depth= 4] . ( 58 sec) [ -20623.6732] [ 4000] [depth= 1] . ( 59 sec) [ -20516.5611] [ 3993] [depth= 17] . ( 59 sec) [ -20495.3066] [ 3990] [depth= 11] . ( 59 sec) [ -20487.5891] [ 3989] [depth= 14] . ( 60 sec) [ -20441.0942] [ 3978] [depth= 15] . ( 60 sec) [ -20438.8199] [ 3980] [depth= 1] . ( 60 sec) [ -20245.8163] [ 3916] [depth= 21] . ( 60 sec) [ -20245.2513] [ 3914] [depth= 2] . ( 61 sec) [ -20242.4470] [ 3914] [depth= 1] . ( 61 sec) [ -20227.9940] [ 3906] [depth= 6] . ( 61 sec) [ -20227.0859] [ 3906] [depth= 3] . ( 61 sec) [ -20221.9550] [ 3906] [depth= 11] . ( 61 sec) [ -20105.7505] [ 3872] [depth= 15] . ( 62 sec) [ -20077.3329] [ 3868] [depth= 15] . ( 62 sec) [ -20016.1258] [ 3866] [depth= 1] . ( 62 sec) [ -19960.6963] [ 3853] [depth= 21] . ( 62 sec) [ -19788.1868] [ 3821] [depth= 13] . ( 63 sec) [ -19775.0409] [ 3822] [depth= 1] . ( 63 sec) [ -19741.1546] [ 3819] [depth= 12] . ( 63 sec) [ -19739.5593] [ 3819] [depth= 1] . ( 64 sec) [ -19708.2912] [ 3818] [depth= 15] . ( 64 sec) [ -19690.0000] [ 3817] [depth= 15] . ( 64 sec) [ -19688.4650] [ 3817] [depth= 1] . ( 65 sec) [ -19684.9017] [ 3816] [depth= 1] . ( 65 sec) [ -19593.4571] [ 3788] [depth= 14] . ( 65 sec) [ -19524.1020] [ 3743] [depth= 1] . ( 65 sec) [ -19509.7846] [ 3738] [depth= 13] . ( 66 sec) [ -19507.2750] [ 3733] [depth= 5] . ( 66 sec) [ -19479.4943] [ 3733] [depth= 1] . ( 66 sec) [ -19411.8353] [ 3714] [depth= 13] . ( 66 sec) [ -19164.8253] [ 3663] [depth= 13] . ( 67 sec) [ -19124.1191] [ 3663] [depth= 3] . ( 67 sec) [ -19101.8409] [ 3650] [depth= 7] . ( 68 sec) [ -19091.5357] [ 3651] [depth= 1] . ( 68 sec) [ -18996.1295] [ 3645] [depth= 2] . ( 68 sec) [ -18968.8053] [ 3628] [depth= 12] . ( 68 sec) [ -18966.7482] [ 3628] [depth= 1] . ( 68 sec) [ -18709.9687] [ 3608] [depth= 4] . ( 69 sec) [ -18529.7407] [ 3579] [depth= 5] . ( 70 sec) [ -18529.3808] [ 3579] [depth= 9] . ( 70 sec) [ -18463.6079] [ 3577] [depth= 1] . ( 70 sec) [ -18409.0971] [ 3577] [depth= 1] . ( 70 sec) [ -18404.7122] [ 3575] [depth= 1] . ( 71 sec) [ -17956.6551] [ 3552] [depth= 13] . ( 71 sec) [ -17954.9594] [ 3553] [depth= 2] . ( 71 sec) [ -17897.2614] [ 3522] [depth= 16] . ( 72 sec) [ -17796.7414] [ 3490] [depth= 1] . ( 72 sec) [ -17783.3540] [ 3489] [depth= 10] . ( 72 sec) [ -17768.7871] [ 3488] [depth= 3] . ( 72 sec) [ -17766.0711] [ 3491] [depth= 1] . ( 73 sec) [ -17604.7369] [ 3433] [depth= 18] . ( 73 sec) [ -17219.7684] [ 3440] [depth= 1] . ( 73 sec) [ -17183.2638] [ 3423] [depth= 13] . ( 73 sec) [ -17168.5255] [ 3417] [depth= 1] . ( 73 sec) [ -17168.2216] [ 3417] [depth= 1] . ( 74 sec) [ -17161.5120] [ 3407] [depth= 5] . ( 74 sec) [ -17135.8376] [ 3412] [depth= 3] . ( 74 sec) [ -17004.1843] [ 3374] [depth= 15] . ( 74 sec) [ -16984.0331] [ 3373] [depth= 1] . ( 75 sec) [ -16717.3435] [ 3304] [depth= 6] . ( 75 sec) [ -16654.0347] [ 3289] [depth= 17] . ( 75 sec) [ -16622.3569] [ 3289] [depth= 2] . ( 75 sec) [ -16590.5854] [ 3286] [depth= 3] . ( 75 sec) [ -16576.6658] [ 3278] [depth= 4] . ( 76 sec) [ -16563.4010] [ 3276] [depth= 1] . ( 76 sec) [ -16505.5314] [ 3233] [depth= 13] . ( 76 sec) [ -16468.9532] [ 3232] [depth= 4] . ( 76 sec) [ -16340.4062] [ 3182] [depth= 1] . ( 77 sec) [ -16235.2824] [ 3160] [depth= 2] . ( 77 sec) [ -16149.3489] [ 3124] [depth= 2] . ( 77 sec) [ -16116.9688] [ 3115] [depth= 3] . ( 78 sec) [ -16087.6860] [ 3110] [depth= 10] . ( 78 sec) [ -16085.8378] [ 3110] [depth= 1] . ( 78 sec) [ -16077.6078] [ 3109] [depth= 9] . ( 78 sec) [ -16068.3142] [ 3109] [depth= 1] . ( 79 sec) [ -16060.7335] [ 3110] [depth= 1] . ( 79 sec) [ -16008.5580] [ 3108] [depth= 18] . ( 79 sec) [ -15858.9625] [ 3081] [depth= 7] . ( 80 sec) [ -15724.6651] [ 3054] [depth= 4] . ( 81 sec) [ -15697.2171] [ 3033] [depth= 10] . ( 81 sec) [ -15678.3669] [ 3027] [depth= 6] . ( 81 sec) [ -15671.5150] [ 3016] [depth= 2] . ( 81 sec) [ -15671.2109] [ 3016] [depth= 3] . ( 82 sec) [ -15661.2117] [ 3002] [depth= 5] . ( 82 sec) [ -15642.9710] [ 3002] [depth= 2] . ( 82 sec) [ -15625.3908] [ 2995] [depth= 10] . ( 82 sec) [ -15617.7413] [ 2997] [depth= 3] . ( 82 sec) [ -15617.4185] [ 2997] [depth= 2] . ( 83 sec) [ -15480.6350] [ 2956] [depth= 13] . ( 83 sec) [ -15470.1001] [ 2953] [depth= 2] . ( 83 sec) [ -15384.7665] [ 2934] [depth= 13] . ( 84 sec) [ -15181.2285] [ 2891] [depth= 4] . ( 84 sec) [ -15173.1098] [ 2889] [depth= 1] . ( 84 sec) [ -15172.4690] [ 2889] [depth= 1] . ( 84 sec) [ -15171.6258] [ 2876] [depth= 4] . ( 85 sec) [ -15148.3914] [ 2876] [depth= 2] . ( 85 sec) [ -15146.9478] [ 2878] [depth= 2] . ( 85 sec) [ -15109.5300] [ 2869] [depth= 1] . ( 86 sec) [ -15099.5037] [ 2870] [depth= 9] . ( 86 sec) [ -15098.4193] [ 2870] [depth= 1] . ( 86 sec) [ -14992.9167] [ 2857] [depth= 13] . ( 86 sec) [ -14991.7694] [ 2857] [depth= 1] . ( 87 sec) [ -14972.8288] [ 2857] [depth= 4] . ( 87 sec) [ -14970.3843] [ 2859] [depth= 1] . ( 87 sec) [ -14964.4584] [ 2857] [depth= 2] . ( 87 sec) [ -14963.2571] [ 2857] [depth= 2] . ( 87 sec) [ -14962.7747] [ 2857] [depth= 3] . ( 88 sec) [ -14959.4361] [ 2857] [depth= 10] . ( 88 sec) [ -14959.1686] [ 2857] [depth= 2] . ( 88 sec) [ -14842.4501] [ 2809] [depth= 6] . ( 88 sec) [ -14822.5306] [ 2810] [depth= 1] . ( 89 sec) [ -14762.9387] [ 2815] [depth= 18] . ( 90 sec) [ -14758.3373] [ 2814] [depth= 1] . ( 90 sec) [ -14690.5482] [ 2797] [depth= 6] . ( 90 sec) [ -14628.2251] [ 2795] [depth= 2] . ( 90 sec) [ -14575.5028] [ 2778] [depth= 4] . ( 91 sec) [ -14561.5340] [ 2777] [depth= 9] . ( 91 sec) [ -14432.5217] [ 2766] [depth= 6] . ( 91 sec) [ -14420.0741] [ 2764] [depth= 7] . ( 91 sec) [ -14419.9698] [ 2765] [depth= 2] . ( 92 sec) [ -14330.6959] [ 2760] [depth= 11] . ( 92 sec) [ -14318.5355] [ 2757] [depth= 9] . ( 92 sec) [ -14195.1247] [ 2714] [depth= 14] . ( 92 sec) [ -14191.1757] [ 2700] [depth= 6] . ( 92 sec) [ -14165.6513] [ 2704] [depth= 1] . ( 93 sec) [ -14158.3410] [ 2705] [depth= 1] . ( 93 sec) [ -14092.5913] [ 2689] [depth= 4] . ( 93 sec) [ -14074.8742] [ 2687] [depth= 4] . ( 93 sec) [ -14071.0977] [ 2686] [depth= 1] . ( 94 sec) [ -14030.8446] [ 2683] [depth= 11] . ( 94 sec) [ -13996.6891] [ 2668] [depth= 2] . ( 94 sec) [ -13987.0319] [ 2670] [depth= 1] . ( 94 sec) [ -13979.4308] [ 2669] [depth= 2] . ( 95 sec) [ -13979.0426] [ 2671] [depth= 2] . ( 95 sec) [ -13978.9986] [ 2671] [depth= 2] . ( 95 sec) [ -13978.6509] [ 2671] [depth= 6] . ( 96 sec) [ -13970.1931] [ 2669] [depth= 2] . ( 96 sec) [ -13933.6105] [ 2664] [depth= 20] . ( 96 sec) [ -13922.7587] [ 2663] [depth= 1] . ( 96 sec) [ -13888.6069] [ 2655] [depth= 24] . ( 96 sec) [ -13818.7448] [ 2599] [depth= 5] . ( 97 sec) [ -13782.4759] [ 2597] [depth= 2] . ( 97 sec) [ -13777.3598] [ 2594] [depth= 1] . ( 97 sec) [ -13766.0224] [ 2593] [depth= 2] . ( 97 sec) [ -13735.4717] [ 2591] [depth= 7] . ( 98 sec) [ -13663.3190] [ 2591] [depth= 3] . ( 98 sec) [ -13643.8333] [ 2585] [depth= 3] . ( 98 sec) [ -13534.6094] [ 2559] [depth= 3] . ( 99 sec) [ -13528.7098] [ 2559] [depth= 1] . ( 99 sec) [ -13509.3570] [ 2556] [depth= 1] . ( 99 sec) [ -13420.5919] [ 2558] [depth= 5] . ( 99 sec) [ -13416.8928] [ 2559] [depth= 2] . ( 100 sec) [ -13411.0443] [ 2556] [depth= 2] . ( 100 sec) [ -13275.9836] [ 2534] [depth= 15] . ( 100 sec) [ -13251.3061] [ 2534] [depth= 1] . ( 100 sec) [ -13198.2322] [ 2524] [depth= 6] . ( 100 sec) [ -13196.3452] [ 2523] [depth= 1] . ( 101 sec) [ -13115.7682] [ 2528] [depth= 4] . ( 102 sec) [ -13114.4033] [ 2529] [depth= 1] . ( 102 sec) [ -13104.1385] [ 2529] [depth= 1] . ( 102 sec) [ -13100.7710] [ 2529] [depth= 2] . ( 103 sec) [ -13096.9168] [ 2529] [depth= 1] . ( 103 sec) [ -13079.1835] [ 2525] [depth= 3] . ( 103 sec) [ -13075.5008] [ 2525] [depth= 2] . ( 103 sec) [ -13073.1301] [ 2525] [depth= 3] . ( 104 sec) [ -13022.4112] [ 2506] [depth= 5] . ( 104 sec) [ -12978.9381] [ 2495] [depth= 6] . ( 104 sec) [ -12827.4985] [ 2476] [depth= 2] . ( 104 sec) [ -12827.3611] [ 2481] [depth= 1] . ( 105 sec) [ -12820.9099] [ 2478] [depth= 2] . ( 105 sec) [ -12785.7250] [ 2478] [depth= 1] . ( 105 sec) [ -12780.3073] [ 2474] [depth= 3] . ( 105 sec) [ -12779.9637] [ 2475] [depth= 2] . ( 105 sec) [ -12779.8937] [ 2480] [depth= 1] . ( 106 sec) [ -12766.8572] [ 2478] [depth= 1] . ( 106 sec) [ -12754.1593] [ 2476] [depth= 3] . ( 106 sec) [ -12704.0503] [ 2475] [depth= 1] . ( 107 sec) [ -12699.7881] [ 2475] [depth= 1] . ( 107 sec) [ -12697.0535] [ 2475] [depth= 1] . ( 108 sec) [ -12693.8361] [ 2477] [depth= 2] . ( 108 sec) [ -12693.5385] [ 2477] [depth= 1] . ( 108 sec) [ -12690.6769] [ 2476] [depth= 3] . ( 108 sec) [ -12683.6610] [ 2475] [depth= 2] . ( 108 sec) [ -12683.4906] [ 2475] [depth= 3] . ( 111 sec) [ -12356.0348] [Branch lengths ] . ( 117 sec) [ -12293.9634] [GTR parameters ] . ( 117 sec) [ -12285.3012] [Alpha ][ 0.409935] . ( 118 sec) [ -12281.3884] [ 2476] [depth= 1] . ( 118 sec) [ -12273.1137] [ 2465] [depth= 3] . ( 118 sec) [ -12146.0591] [ 2423] [depth= 16] . ( 118 sec) [ -12137.8597] [ 2422] [depth= 1] . ( 118 sec) [ -12072.5918] [ 2396] [depth= 1] . ( 119 sec) [ -12048.8768] [ 2391] [depth= 1] . ( 119 sec) [ -12039.3715] [ 2391] [depth= 1] . ( 119 sec) [ -12034.8661] [ 2391] [depth= 1] . ( 120 sec) [ -12032.2302] [ 2389] [depth= 2] . ( 120 sec) [ -12026.0320] [ 2387] [depth= 3] . ( 120 sec) [ -11995.2005] [ 2376] [depth= 1] . ( 121 sec) [ -11994.7269] [ 2376] [depth= 1] . ( 121 sec) [ -11978.3765] [ 2373] [depth= 3] . ( 124 sec) [ -11978.0086] [ 2373] [depth= 2] . ( 124 sec) [ -11971.0170] [ 2372] [depth= 1] . ( 124 sec) [ -11968.8968] [ 2368] [depth= 1] . ( 125 sec) [ -11958.4391] [ 2365] [depth= 1] . ( 125 sec) [ -11958.2855] [ 2365] [depth= 1] . ( 125 sec) [ -11958.2649] [ 2365] [depth= 1] . ( 126 sec) [ -11937.4572] [ 2360] [depth= 2] . ( 126 sec) [ -11936.0300] [ 2360] [depth= 1] . ( 126 sec) [ -11935.6375] [ 2354] [depth= 5] . ( 127 sec) [ -11931.9970] [ 2353] [depth= 2] . ( 127 sec) [ -11886.7260] [ 2310] [depth= 4] . ( 127 sec) [ -11871.5535] [ 2291] [depth= 8] . ( 127 sec) [ -11871.1340] [ 2292] [depth= 1] . ( 128 sec) [ -11870.9240] [ 2292] [depth= 1] . ( 129 sec) [ -11869.8589] [ 2286] [depth= 1] . ( 132 sec) [ -11869.8390] [ 2286] [depth= 3] . ( 133 sec) [ -11866.2011] [ 2285] [depth= 5] . ( 134 sec) [ -11717.5901] [ 2245] [depth= 16] . ( 134 sec) [ -11684.2710] [ 2209] [depth= 7] . ( 135 sec) [ -11675.0001] [ 2211] [depth= 2] . ( 135 sec) [ -11664.9240] [ 2211] [depth= 1] . ( 137 sec) [ -11664.6883] [ 2211] [depth= 1] . ( 137 sec) [ -11657.8559] [ 2207] [depth= 1] . ( 137 sec) [ -11656.2303] [ 2199] [depth= 5] . ( 137 sec) [ -11645.9335] [ 2198] [depth= 3] . ( 138 sec) [ -11642.4211] [ 2202] [depth= 1] . ( 138 sec) [ -11632.6913] [ 2205] [depth= 3] . ( 139 sec) [ -11589.1858] [ 2191] [depth= 13] . ( 139 sec) [ -11587.4289] [ 2188] [depth= 3] . ( 140 sec) [ -11584.1342] [ 2188] [depth= 4] . ( 140 sec) [ -11581.5771] [ 2185] [depth= 1] . ( 140 sec) [ -11581.5363] [ 2184] [depth= 1] . ( 140 sec) [ -11566.6806] [ 2183] [depth= 3] . ( 140 sec) [ -11566.6687] [ 2182] [depth= 1] . ( 143 sec) [ -11566.5371] [ 2184] [depth= 1] . ( 144 sec) [ -11550.7902] [ 2179] [depth= 2] . ( 144 sec) [ -11538.0690] [ 2178] [depth= 4] . ( 144 sec) [ -11536.1520] [ 2181] [depth= 1] . ( 144 sec) [ -11477.0149] [ 2169] [depth= 2] . ( 145 sec) [ -11476.9913] [ 2169] [depth= 1] . ( 145 sec) [ -11476.0064] [ 2169] [depth= 1] . ( 146 sec) [ -11473.9686] [ 2169] [depth= 2] . ( 146 sec) [ -11464.6880] [ 2169] [depth= 2] . ( 146 sec) [ -11459.5988] [ 2171] [depth= 1] . ( 146 sec) [ -11451.0954] [ 2169] [depth= 2] . ( 147 sec) [ -11334.0826] [ 2112] [depth= 9] . ( 148 sec) [ -11331.8766] [ 2113] [depth= 1] . ( 148 sec) [ -11331.7786] [ 2112] [depth= 1] . ( 149 sec) [ -11331.2572] [ 2106] [depth= 6] . ( 149 sec) [ -11307.4656] [ 2115] [depth= 5] . ( 149 sec) [ -11307.3908] [ 2113] [depth= 1] . ( 151 sec) [ -11306.8405] [ 2113] [depth= 1] . ( 152 sec) [ -11297.0082] [ 2111] [depth= 2] . ( 153 sec) [ -11296.5837] [ 2111] [depth= 2] . ( 155 sec) [ -11289.8428] [ 2110] [depth= 3] . ( 157 sec) [ -11269.5876] [ 2107] [depth= 2] . ( 157 sec) [ -11268.5873] [ 2107] [depth= 3] . ( 161 sec) [ -11268.4282] [ 2107] [depth= 1] . ( 161 sec) [ -11268.3112] [ 2107] [depth= 1] . ( 162 sec) [ -11247.7754] [ 2090] [depth= 8] . ( 163 sec) [ -11207.6076] [ 2091] [depth= 6] . ( 165 sec) [ -11205.6459] [ 2091] [depth= 3] . ( 165 sec) [ -11195.6987] [ 2091] [depth= 2] . ( 165 sec) [ -11178.7853] [ 2066] [depth= 2] . ( 166 sec) [ -11178.7676] [ 2066] [depth= 1] . ( 166 sec) [ -11177.8669] [ 2067] [depth= 1] . ( 167 sec) [ -11177.8553] [ 2068] [depth= 5] . ( 168 sec) [ -11176.6659] [ 2066] [depth= 1] . ( 168 sec) [ -11170.5183] [ 2065] [depth= 3] . ( 169 sec) [ -11168.5174] [ 2065] [depth= 1] . ( 169 sec) [ -11168.3703] [ 2065] [depth= 1] . ( 169 sec) [ -11168.3427] [ 2065] [depth= 2] . ( 172 sec) [ -11160.8806] [ 2065] [depth= 2] . ( 172 sec) [ -11160.6657] [ 2065] [depth= 1] . ( 174 sec) [ -11160.5418] [ 2065] [depth= 1] . ( 175 sec) [ -11148.1398] [ 2061] [depth= 1] . ( 178 sec) [ -11147.8344] [ 2061] [depth= 2] . ( 179 sec) [ -11145.5453] [ 2060] [depth= 3] . ( 182 sec) [ -11145.0059] [ 2060] [depth= 1] . ( 186 sec) [ -11142.0642] [ 2059] [depth= 1] . ( 190 sec) [ -11142.0503] [ 2059] [depth= 1] . ( 190 sec) [ -11142.0063] [ 2059] [depth= 3] . ( 191 sec) [ -11125.3579] [ 2063] [depth= 7] . ( 191 sec) [ -11124.9265] [ 2063] [depth= 2] . ( 192 sec) [ -11023.2109] [ 2030] [depth= 7] . ( 196 sec) [ -11023.1245] [ 2030] [depth= 1] . ( 197 sec) [ -11019.9021] [ 2029] [depth= 2] . ( 198 sec) [ -11014.9430] [ 2027] [depth= 4] . ( 198 sec) [ -11010.5124] [ 2027] [depth= 3] . ( 199 sec) [ -11010.2031] [ 2025] [depth= 1] . ( 199 sec) [ -11009.7239] [ 2026] [depth= 1] . ( 199 sec) [ -10893.6425] [ 1976] [depth= 6] . ( 201 sec) [ -10893.5984] [ 1976] [depth= 3] . ( 201 sec) [ -10893.4455] [ 1976] [depth= 2] . ( 202 sec) [ -10852.1069] [ 1953] [depth= 3] . ( 203 sec) [ -10851.7320] [ 1955] [depth= 3] . ( 203 sec) [ -10779.1713] [ 1922] [depth= 8] . ( 204 sec) [ -10773.5170] [ 1921] [depth= 2] . ( 204 sec) [ -10772.9680] [ 1922] [depth= 1] . ( 204 sec) [ -10770.2214] [ 1922] [depth= 5] . ( 205 sec) [ -10756.3682] [ 1914] [depth= 2] . ( 208 sec) [ -10755.6655] [ 1913] [depth= 1] . ( 209 sec) [ -10755.3673] [ 1912] [depth= 4] . ( 210 sec) [ -10755.3369] [ 1912] [depth= 2] . ( 210 sec) [ -10755.1760] [ 1912] [depth= 1] . ( 212 sec) [ -10754.8956] [ 1912] [depth= 1] . ( 213 sec) [ -10754.5673] [ 1916] [depth= 1] . ( 214 sec) [ -10754.4865] [ 1916] [depth= 1] . ( 215 sec) [ -10754.3902] [ 1916] [depth= 2] . ( 215 sec) [ -10746.5260] [ 1915] [depth= 2] . ( 217 sec) [ -10746.4789] [ 1915] [depth= 4] . ( 217 sec) [ -10746.4629] [ 1915] [depth= 2] . ( 218 sec) [ -10746.3004] [ 1915] [depth= 1] . ( 218 sec) [ -10745.9530] [ 1917] [depth= 1] . ( 219 sec) [ -10742.0602] [ 1913] [depth= 1] . ( 219 sec) [ -10740.4020] [ 1910] [depth= 1] . ( 219 sec) [ -10740.1763] [ 1910] [depth= 2] . ( 220 sec) [ -10740.1457] [ 1910] [depth= 1] . ( 221 sec) [ -10740.1085] [ 1910] [depth= 1] . ( 222 sec) [ -10739.8655] [ 1910] [depth= 1] . ( 222 sec) [ -10739.6826] [ 1910] [depth= 1] . ( 224 sec) [ -10739.5951] [ 1910] [depth= 1] . ( 226 sec) [ -10738.2559] [ 1911] [depth= 2] . ( 227 sec) [ -10738.2377] [ 1911] [depth= 1] . ( 227 sec) [ -10738.1823] [ 1911] [depth= 2] . ( 228 sec) [ -10737.6497] [ 1911] [depth= 1] . ( 228 sec) [ -10733.3831] [ 1910] [depth= 1] . ( 228 sec) [ -10730.3672] [ 1910] [depth= 2] . ( 229 sec) [ -10730.2271] [ 1909] [depth= 2] . ( 230 sec) [ -10729.9337] [ 1909] [depth= 1] . ( 231 sec) [ -10729.8600] [ 1909] [depth= 1] . ( 232 sec) [ -10721.5968] [ 1909] [depth= 3] . ( 232 sec) [ -10721.4275] [ 1908] [depth= 1] . ( 232 sec) [ -10718.8362] [ 1910] [depth= 1] . ( 234 sec) [ -10716.5163] [ 1901] [depth= 6] . ( 234 sec) [ -10700.1215] [ 1903] [depth= 1] . ( 235 sec) [ -10700.0624] [ 1903] [depth= 2] . ( 240 sec) [ -10635.6107] [Branch lengths ] . ( 243 sec) [ -10634.7867] [GTR parameters ] . ( 243 sec) [ -10629.9476] [Alpha ][ 0.487572] . ( 244 sec) [ -10620.0033] [ 1899] [depth= 1] . ( 244 sec) [ -10618.3984] [ 1898] [depth= 2] . ( 247 sec) [ -10613.1483] [ 1899] [depth= 2] . ( 247 sec) [ -10610.3226] [ 1899] [depth= 2] . ( 256 sec) [ -10607.1076] [ 1898] [depth= 1] . ( 265 sec) [ -10606.8865] [ 1895] [depth= 3] . ( 268 sec) [ -10604.9561] [ 1893] [depth= 1] . ( 268 sec) [ -10603.3763] [ 1891] [depth= 2] . ( 270 sec) [ -10600.1310] [ 1891] [depth= 3] . ( 270 sec) [ -10599.8431] [ 1891] [depth= 1] . ( 272 sec) [ -10592.6768] [ 1885] [depth= 4] . ( 276 sec) [ -10592.6626] [ 1883] [depth= 1] . ( 277 sec) [ -10591.1739] [ 1887] [depth= 1] . ( 278 sec) [ -10590.9355] [ 1891] [depth= 1] . ( 278 sec) [ -10590.9018] [ 1891] [depth= 1] . ( 282 sec) [ -10588.1125] [ 1892] [depth= 1] . ( 285 sec) [ -10587.0813] [ 1892] [depth= 5] . ( 298 sec) [ -10586.4228] [ 1893] [depth= 2] . ( 302 sec) [ -10586.1447] [ 1893] [depth= 1] . ( 306 sec) [ -10586.1174] [ 1893] [depth= 1] . ( 307 sec) [ -10586.0417] [ 1893] [depth= 1] . ( 307 sec) [ -10586.0095] [ 1893] [depth= 2] . ( 314 sec) [ -10585.7243] [ 1893] [depth= 2] . ( 315 sec) [ -10585.4440] [ 1894] [depth= 2] . ( 323 sec) [ -10585.1974] [ 1894] [depth= 1] . ( 327 sec) [ -10585.0960] [ 1894] [depth= 1] . ( 330 sec) [ -10585.0473] [ 1894] [depth= 4] . ( 330 sec) [ -10584.2868] [ 1890] [depth= 1] . ( 353 sec) [ -10584.2190] [ 1890] [depth= 2] . ( 354 sec) [ -10584.0576] [ 1890] [depth= 1] . ( 357 sec) [ -10583.9100] [ 1890] [depth= 1] . ( 371 sec) [ -10583.5894] [ 1890] [depth= 1] . ( 372 sec) [ -10583.5591] [ 1890] [depth= 1] . ( 373 sec) [ -10583.5058] [ 1890] [depth= 1] . ( 376 sec) [ -10583.1120] [ 1890] [depth= 3] . ( 378 sec) [ -10583.0526] [ 1890] [depth= 1] . ( 385 sec) [ -10583.0167] [ 1890] [depth= 2] . ( 388 sec) [ -10573.1051] [Branch lengths ] . ( 391 sec) [ -10573.0479] [GTR parameters ] . ( 391 sec) [ -10572.9750] [Alpha ][ 0.498193] . ( 409 sec) [ -10572.9267] [ 1889] [depth= 1] . ( 426 sec) [ -10572.8715] [ 1885] [depth= 1] . ( 448 sec) [ -10572.7930] [ 1885] [depth= 1] . ( 465 sec) [ -10572.7738] [ 1884] [depth= 1] . ( 480 sec) [ -10572.7081] [ 1884] [depth= 1] . ( 507 sec) [ -10571.7772] [ 1881] [depth= 2] . ( 511 sec) [ -10571.7649] [ 1881] [depth= 2] . ( 521 sec) [ -10571.5833] [ 1882] [depth= 1] . ( 535 sec) [ -10571.5635] [ 1882] [depth= 1] . ( 545 sec) [ -10569.5276] [Branch lengths ] . ( 547 sec) [ -10569.5119] [GTR parameters ] . ( 547 sec) [ -10569.5073] [Alpha ][ 0.500997] . ( 577 sec) [ -10569.4755] [ 1882] [depth= 3] . ( 579 sec) [ -10569.4608] [ 1882] [depth= 4] . ( 707 sec) [ -10566.6458] [Branch lengths ] . ( 709 sec) [ -10566.6439] [GTR parameters ] . ( 710 sec) [ -10566.6439] [Alpha ][ 0.500997] . ( 740 sec) [ -10566.5386] [ 1882] [depth= 4] . ( 860 sec) [ -10565.1048] [Branch lengths ] . ( 862 sec) [ -10565.1045] [GTR parameters ] . ( 862 sec) [ -10565.1045] [Alpha ][ 0.500997] . ( 1021 sec) [ -10565.0794] [Branch lengths ] . ( 1100 sec) [ -10565.0083] [ 1882] [depth= 3] . ( 1283 sec) [ -10564.9770] [Branch lengths ] . ( 1284 sec) [ -10564.9764] [GTR parameters ] . ( 1284 sec) [ -10564.9764] [Alpha ][ 0.500496] . ( 1285 sec) [ -10564.9764] [Topology ] . ( 1289 sec) [ -10564.9738] [Topology ] . ( 1294 sec) [ -10564.9731] [Topology ] . ( 1295 sec) [ -10564.9731] [GTR parameters ] . ( 1295 sec) [ -10564.9731] [Alpha ][ 0.500496] . ( 1295 sec) [ -10564.9731] [Topology ] . ( 1300 sec) [ -10564.9727] [Topology ] . ( 1301 sec) [ -10564.9727] [GTR parameters ] . ( 1301 sec) [ -10564.9727] [Alpha ][ 0.500496] . Checking for NNIs, optimizing five branches... . ( 1334 sec) [ -10564.7392] [Topology ] . Checking for NNIs, optimizing five branches... . ( 1366 sec) [ -10564.7390] [Topology ] . Checking for NNIs, optimizing five branches... . Log likelihood of the current tree: -10564.738980. . [Random start 3/ 5] . Computing pairwise distances... . Building BioNJ tree... . Randomising the tree... . Maximizing likelihood (using SPR moves)... . ( 7 sec) [ -52603.5783] [GTR parameters ] . ( 7 sec) [ -51353.7725] [Alpha ][ 0.500960] . ( 8 sec) [ -50569.3925] [ 7265] [depth= 14] . ( 8 sec) [ -49841.5989] [ 7177] [depth= 11] . ( 8 sec) [ -49729.0947] [ 7172] [depth= 1] . ( 8 sec) [ -49704.1233] [ 7165] [depth= 7] . ( 9 sec) [ -49628.7951] [ 7151] [depth= 1] . ( 9 sec) [ -49586.6513] [ 7148] [depth= 9] . ( 9 sec) [ -49415.6199] [ 7147] [depth= 1] . ( 10 sec) [ -49196.1321] [ 7145] [depth= 13] . ( 10 sec) [ -49166.5343] [ 7127] [depth= 4] . ( 10 sec) [ -49152.0245] [ 7126] [depth= 2] . ( 10 sec) [ -49028.1669] [ 7118] [depth= 4] . ( 10 sec) [ -49005.2931] [ 7118] [depth= 1] . ( 11 sec) [ -48947.5881] [ 7109] [depth= 9] . ( 11 sec) [ -48890.5911] [ 7108] [depth= 4] . ( 11 sec) [ -48788.2434] [ 7104] [depth= 5] . ( 11 sec) [ -48747.1209] [ 7099] [depth= 6] . ( 11 sec) [ -48666.7214] [ 7079] [depth= 3] . ( 12 sec) [ -48572.8159] [ 7079] [depth= 1] . ( 12 sec) [ -48325.8272] [ 7070] [depth= 6] . ( 12 sec) [ -48271.6571] [ 7068] [depth= 2] . ( 12 sec) [ -47984.2065] [ 7039] [depth= 8] . ( 13 sec) [ -47785.8681] [ 7037] [depth= 7] . ( 13 sec) [ -47699.3575] [ 7032] [depth= 21] . ( 13 sec) [ -47574.8581] [ 7032] [depth= 2] . ( 13 sec) [ -47487.9122] [ 7025] [depth= 28] . ( 13 sec) [ -47461.2321] [ 7025] [depth= 2] . ( 14 sec) [ -47441.2720] [ 7027] [depth= 1] . ( 14 sec) [ -46963.8088] [ 7022] [depth= 3] . ( 14 sec) [ -46929.3850] [ 7001] [depth= 41] . ( 14 sec) [ -46703.1099] [ 6951] [depth= 27] . ( 15 sec) [ -46472.0958] [ 6881] [depth= 2] . ( 15 sec) [ -46392.8120] [ 6874] [depth= 38] . ( 15 sec) [ -46329.9023] [ 6859] [depth= 17] . ( 15 sec) [ -46091.6063] [ 6827] [depth= 10] . ( 16 sec) [ -45495.8863] [ 6760] [depth= 21] . ( 16 sec) [ -45301.6395] [ 6727] [depth= 36] . ( 16 sec) [ -45261.5177] [ 6726] [depth= 1] . ( 16 sec) [ -45242.7461] [ 6697] [depth= 32] . ( 17 sec) [ -44954.5005] [ 6695] [depth= 3] . ( 17 sec) [ -44609.3793] [ 6678] [depth= 2] . ( 17 sec) [ -43731.8199] [ 6680] [depth= 1] . ( 17 sec) [ -43056.3896] [ 6676] [depth= 3] . ( 18 sec) [ -43016.4076] [ 6670] [depth= 25] . ( 18 sec) [ -42878.6939] [ 6622] [depth= 2] . ( 18 sec) [ -42774.2767] [ 6621] [depth= 3] . ( 18 sec) [ -42282.1422] [ 6576] [depth= 8] . ( 18 sec) [ -42256.7340] [ 6575] [depth= 8] . ( 19 sec) [ -42113.6209] [ 6561] [depth= 6] . ( 19 sec) [ -41787.0133] [ 6508] [depth= 15] . ( 19 sec) [ -40406.9082] [ 6491] [depth= 3] . ( 20 sec) [ -40344.7823] [ 6485] [depth= 29] . ( 20 sec) [ -40075.9938] [ 6430] [depth= 12] . ( 20 sec) [ -39956.8830] [ 6401] [depth= 6] . ( 20 sec) [ -39930.1761] [ 6391] [depth= 17] . ( 21 sec) [ -39869.0890] [ 6381] [depth= 1] . ( 21 sec) [ -39808.4105] [ 6381] [depth= 12] . ( 21 sec) [ -39504.3747] [ 6329] [depth= 26] . ( 21 sec) [ -39049.3966] [ 6286] [depth= 11] . ( 22 sec) [ -38400.5937] [ 6228] [depth= 25] . ( 22 sec) [ -38092.6814] [ 6208] [depth= 1] . ( 22 sec) [ -37789.2592] [ 6200] [depth= 28] . ( 22 sec) [ -37707.6537] [ 6191] [depth= 17] . ( 23 sec) [ -37664.9693] [ 6176] [depth= 12] . ( 23 sec) [ -37442.1279] [ 6147] [depth= 35] . ( 23 sec) [ -37433.1600] [ 6148] [depth= 1] . ( 23 sec) [ -37379.9431] [ 6143] [depth= 22] . ( 24 sec) [ -37019.2602] [ 6065] [depth= 4] . ( 24 sec) [ -37005.6608] [ 6067] [depth= 16] . ( 24 sec) [ -36952.1417] [ 6060] [depth= 14] . ( 24 sec) [ -36943.9555] [ 6058] [depth= 1] . ( 25 sec) [ -36697.9764] [ 6021] [depth= 21] . ( 25 sec) [ -36618.9108] [ 6005] [depth= 27] . ( 25 sec) [ -36464.5423] [ 5999] [depth= 25] . ( 25 sec) [ -36335.1008] [ 5953] [depth= 29] . ( 26 sec) [ -35940.1019] [ 5922] [depth= 5] . ( 26 sec) [ -35939.8569] [ 5922] [depth= 1] . ( 26 sec) [ -35735.5088] [ 5922] [depth= 7] . ( 26 sec) [ -35473.2517] [ 5921] [depth= 1] . ( 27 sec) [ -35336.6048] [ 5919] [depth= 4] . ( 27 sec) [ -35222.7854] [ 5899] [depth= 1] . ( 27 sec) [ -35218.7886] [ 5896] [depth= 1] . ( 27 sec) [ -34821.7059] [ 5896] [depth= 1] . ( 28 sec) [ -34688.8941] [ 5884] [depth= 16] . ( 28 sec) [ -34411.1347] [ 5851] [depth= 24] . ( 28 sec) [ -34396.0275] [ 5852] [depth= 1] . ( 28 sec) [ -34184.7118] [ 5837] [depth= 12] . ( 29 sec) [ -34053.9067] [ 5815] [depth= 18] . ( 29 sec) [ -33693.1435] [ 5744] [depth= 27] . ( 29 sec) [ -33584.9319] [ 5746] [depth= 17] . ( 29 sec) [ -33492.2390] [ 5731] [depth= 2] . ( 30 sec) [ -33364.5889] [ 5695] [depth= 14] . ( 30 sec) [ -33266.1377] [ 5673] [depth= 16] . ( 30 sec) [ -33203.4828] [ 5655] [depth= 27] . ( 30 sec) [ -32930.1297] [ 5635] [depth= 23] . ( 31 sec) [ -32734.7022] [ 5569] [depth= 24] . ( 31 sec) [ -32642.6256] [ 5567] [depth= 2] . ( 31 sec) [ -32500.9739] [ 5537] [depth= 6] . ( 32 sec) [ -32456.2572] [ 5537] [depth= 8] . ( 32 sec) [ -32455.1063] [ 5537] [depth= 1] . ( 32 sec) [ -32446.9863] [ 5536] [depth= 1] . ( 32 sec) [ -32422.5518] [ 5535] [depth= 33] . ( 33 sec) [ -32315.6409] [ 5539] [depth= 6] . ( 33 sec) [ -32248.6148] [ 5531] [depth= 26] . ( 33 sec) [ -32075.5742] [ 5488] [depth= 13] . ( 33 sec) [ -31686.3354] [ 5488] [depth= 31] . ( 34 sec) [ -31349.0472] [ 5409] [depth= 30] . ( 34 sec) [ -31228.3550] [ 5409] [depth= 1] . ( 34 sec) [ -31096.7131] [ 5390] [depth= 5] . ( 35 sec) [ -31037.8627] [ 5375] [depth= 24] . ( 35 sec) [ -30750.6057] [ 5356] [depth= 19] . ( 35 sec) [ -30434.8887] [ 5287] [depth= 15] . ( 35 sec) [ -30243.6480] [ 5239] [depth= 18] . ( 35 sec) [ -30200.9488] [ 5237] [depth= 2] . ( 36 sec) [ -30105.3576] [ 5231] [depth= 25] . ( 36 sec) [ -29966.0559] [ 5184] [depth= 23] . ( 36 sec) [ -29262.8515] [ 5181] [depth= 17] . ( 36 sec) [ -29096.3693] [ 5140] [depth= 18] . ( 37 sec) [ -29064.9383] [ 5142] [depth= 11] . ( 37 sec) [ -29057.7055] [ 5143] [depth= 1] . ( 37 sec) [ -28975.0539] [ 5140] [depth= 2] . ( 38 sec) [ -28846.3503] [ 5112] [depth= 11] . ( 38 sec) [ -28834.9090] [ 5112] [depth= 2] . ( 38 sec) [ -28833.7050] [ 5112] [depth= 1] . ( 39 sec) [ -28808.5709] [ 5110] [depth= 7] . ( 39 sec) [ -28763.4680] [ 5099] [depth= 20] . ( 39 sec) [ -28510.2436] [ 5053] [depth= 25] . ( 39 sec) [ -28267.0549] [ 5006] [depth= 24] . ( 40 sec) [ -28251.3062] [ 5006] [depth= 1] . ( 40 sec) [ -28205.9506] [ 5005] [depth= 29] . ( 40 sec) [ -28187.7472] [ 5001] [depth= 13] . ( 40 sec) [ -28132.8476] [ 4997] [depth= 19] . ( 41 sec) [ -28111.6079] [ 4991] [depth= 10] . ( 41 sec) [ -27918.2518] [ 4990] [depth= 1] . ( 41 sec) [ -27869.5817] [ 4974] [depth= 7] . ( 41 sec) [ -27863.5939] [ 4973] [depth= 1] . ( 41 sec) [ -27850.6188] [ 4970] [depth= 3] . ( 42 sec) [ -27620.6071] [ 4970] [depth= 1] . ( 42 sec) [ -27481.6834] [ 4936] [depth= 11] . ( 42 sec) [ -27367.6242] [ 4917] [depth= 23] . ( 42 sec) [ -27360.0683] [ 4916] [depth= 1] . ( 43 sec) [ -27078.7092] [ 4914] [depth= 11] . ( 43 sec) [ -26680.8175] [ 4825] [depth= 6] . ( 43 sec) [ -26628.8487] [ 4816] [depth= 2] . ( 43 sec) [ -26531.1096] [ 4796] [depth= 15] . ( 44 sec) [ -26470.6549] [ 4788] [depth= 18] . ( 44 sec) [ -26428.1879] [ 4782] [depth= 12] . ( 44 sec) [ -26419.9521] [ 4782] [depth= 1] . ( 44 sec) [ -26183.1239] [ 4725] [depth= 21] . ( 45 sec) [ -26180.2350] [ 4725] [depth= 2] . ( 45 sec) [ -26162.5324] [ 4722] [depth= 1] . ( 45 sec) [ -26121.8862] [ 4718] [depth= 20] . ( 45 sec) [ -26101.0780] [ 4717] [depth= 1] . ( 46 sec) [ -26081.8742] [ 4714] [depth= 2] . ( 46 sec) [ -25812.5240] [ 4651] [depth= 10] . ( 46 sec) [ -25663.3057] [ 4637] [depth= 14] . ( 46 sec) [ -25483.2469] [ 4570] [depth= 19] . ( 47 sec) [ -25430.0488] [ 4558] [depth= 8] . ( 47 sec) [ -25306.7589] [ 4541] [depth= 20] . ( 47 sec) [ -25268.4144] [ 4524] [depth= 9] . ( 48 sec) [ -25228.1547] [ 4521] [depth= 1] . ( 48 sec) [ -25082.8194] [ 4480] [depth= 22] . ( 48 sec) [ -25057.3390] [ 4475] [depth= 1] . ( 49 sec) [ -24626.4732] [ 4408] [depth= 9] . ( 49 sec) [ -24607.7908] [ 4403] [depth= 1] . ( 49 sec) [ -24467.4221] [ 4379] [depth= 23] . ( 49 sec) [ -24419.8922] [ 4366] [depth= 4] . ( 50 sec) [ -24273.7450] [ 4330] [depth= 16] . ( 50 sec) [ -24184.7951] [ 4304] [depth= 4] . ( 50 sec) [ -24155.0661] [ 4305] [depth= 1] . ( 50 sec) [ -24047.8197] [ 4288] [depth= 7] . ( 51 sec) [ -23979.7614] [ 4294] [depth= 1] . ( 51 sec) [ -23434.9499] [ 4281] [depth= 8] . ( 51 sec) [ -23208.4718] [ 4284] [depth= 1] . ( 51 sec) [ -23059.7065] [ 4270] [depth= 9] . ( 52 sec) [ -22823.5669] [ 4230] [depth= 20] . ( 52 sec) [ -22639.1673] [ 4212] [depth= 7] . ( 52 sec) [ -22529.5509] [ 4209] [depth= 1] . ( 53 sec) [ -22358.8980] [ 4149] [depth= 16] . ( 53 sec) [ -22352.9821] [ 4155] [depth= 1] . ( 53 sec) [ -22293.6027] [ 4118] [depth= 8] . ( 53 sec) [ -22146.2636] [ 4103] [depth= 17] . ( 54 sec) [ -22138.0263] [ 4103] [depth= 1] . ( 54 sec) [ -22130.6438] [ 4102] [depth= 1] . ( 54 sec) [ -22129.2693] [ 4103] [depth= 1] . ( 54 sec) [ -22107.7207] [ 4102] [depth= 19] . ( 55 sec) [ -22098.7377] [ 4101] [depth= 1] . ( 55 sec) [ -21077.2911] [ 4069] [depth= 15] . ( 55 sec) [ -21062.7901] [ 4069] [depth= 20] . ( 56 sec) [ -21056.6760] [ 4069] [depth= 2] . ( 56 sec) [ -20918.4890] [ 4025] [depth= 4] . ( 56 sec) [ -20654.0685] [ 3975] [depth= 20] . ( 56 sec) [ -20600.6576] [ 3975] [depth= 5] . ( 57 sec) [ -20582.2374] [ 3977] [depth= 24] . ( 57 sec) [ -20571.8325] [ 3976] [depth= 1] . ( 57 sec) [ -20541.6400] [ 3944] [depth= 1] . ( 57 sec) [ -20416.7023] [ 3897] [depth= 7] . ( 58 sec) [ -20383.9990] [ 3897] [depth= 11] . ( 58 sec) [ -20366.4843] [ 3895] [depth= 2] . ( 58 sec) [ -20325.6158] [ 3888] [depth= 2] . ( 59 sec) [ -20312.7538] [ 3888] [depth= 1] . ( 59 sec) [ -20311.0609] [ 3888] [depth= 1] . ( 59 sec) [ -20229.6733] [ 3849] [depth= 6] . ( 60 sec) [ -20228.8644] [ 3850] [depth= 2] . ( 60 sec) [ -20044.2585] [ 3792] [depth= 15] . ( 60 sec) [ -20005.8790] [ 3791] [depth= 1] . ( 60 sec) [ -19976.3062] [ 3784] [depth= 14] . ( 61 sec) [ -19892.0644] [ 3766] [depth= 8] . ( 61 sec) [ -19861.2592] [ 3754] [depth= 8] . ( 61 sec) [ -19854.3573] [ 3753] [depth= 4] . ( 61 sec) [ -19843.3344] [ 3746] [depth= 5] . ( 61 sec) [ -19842.8258] [ 3746] [depth= 3] . ( 62 sec) [ -19837.2355] [ 3748] [depth= 1] . ( 62 sec) [ -19779.3139] [ 3743] [depth= 10] . ( 62 sec) [ -19756.8457] [ 3733] [depth= 2] . ( 62 sec) [ -19639.3506] [ 3733] [depth= 6] . ( 63 sec) [ -19627.1563] [ 3734] [depth= 14] . ( 63 sec) [ -19625.9745] [ 3734] [depth= 1] . ( 63 sec) [ -19601.2354] [ 3729] [depth= 16] . ( 64 sec) [ -19368.2253] [ 3671] [depth= 15] . ( 64 sec) [ -19309.1634] [ 3660] [depth= 19] . ( 64 sec) [ -19305.6057] [ 3659] [depth= 6] . ( 65 sec) [ -19267.1729] [ 3653] [depth= 27] . ( 65 sec) [ -19258.3939] [ 3647] [depth= 14] . ( 65 sec) [ -19221.4612] [ 3641] [depth= 15] . ( 66 sec) [ -19190.6143] [ 3637] [depth= 3] . ( 66 sec) [ -19186.4242] [ 3637] [depth= 5] . ( 66 sec) [ -19185.1344] [ 3637] [depth= 1] . ( 66 sec) [ -19178.9368] [ 3638] [depth= 5] . ( 67 sec) [ -19173.9806] [ 3637] [depth= 1] . ( 67 sec) [ -18905.8161] [ 3628] [depth= 23] . ( 67 sec) [ -18835.2117] [ 3568] [depth= 11] . ( 67 sec) [ -18832.7878] [ 3568] [depth= 6] . ( 68 sec) [ -18827.2613] [ 3567] [depth= 4] . ( 68 sec) [ -18816.2103] [ 3564] [depth= 12] . ( 68 sec) [ -18806.9374] [ 3556] [depth= 2] . ( 68 sec) [ -18697.1524] [ 3552] [depth= 2] . ( 69 sec) [ -18692.3968] [ 3551] [depth= 10] . ( 69 sec) [ -18639.9791] [ 3553] [depth= 1] . ( 69 sec) [ -18609.4831] [ 3549] [depth= 3] . ( 69 sec) [ -18561.4434] [ 3543] [depth= 1] . ( 70 sec) [ -18368.8611] [ 3528] [depth= 13] . ( 70 sec) [ -18309.0617] [ 3525] [depth= 1] . ( 70 sec) [ -18092.9305] [ 3456] [depth= 26] . ( 70 sec) [ -18019.1143] [ 3448] [depth= 2] . ( 71 sec) [ -17985.3228] [ 3445] [depth= 3] . ( 71 sec) [ -17980.7561] [ 3447] [depth= 1] . ( 71 sec) [ -17933.8979] [ 3411] [depth= 11] . ( 71 sec) [ -17919.7993] [ 3410] [depth= 9] . ( 72 sec) [ -17889.4964] [ 3402] [depth= 1] . ( 72 sec) [ -17886.2767] [ 3401] [depth= 11] . ( 72 sec) [ -17873.0247] [ 3401] [depth= 1] . ( 73 sec) [ -17868.0424] [ 3402] [depth= 15] . ( 73 sec) [ -17739.9040] [ 3360] [depth= 16] . ( 73 sec) [ -17733.5510] [ 3359] [depth= 1] . ( 73 sec) [ -17705.1803] [ 3352] [depth= 11] . ( 74 sec) [ -17652.4419] [ 3352] [depth= 1] . ( 74 sec) [ -17591.2921] [ 3339] [depth= 12] . ( 74 sec) [ -17587.5320] [ 3339] [depth= 1] . ( 74 sec) [ -17357.7002] [ 3340] [depth= 2] . ( 75 sec) [ -17199.3911] [ 3283] [depth= 15] . ( 75 sec) [ -17174.7582] [ 3279] [depth= 4] . ( 75 sec) [ -17040.8153] [ 3279] [depth= 6] . ( 75 sec) [ -17010.4364] [ 3279] [depth= 2] . ( 76 sec) [ -16997.8780] [ 3279] [depth= 8] . ( 76 sec) [ -16961.6729] [ 3279] [depth= 1] . ( 77 sec) [ -16760.9411] [ 3205] [depth= 19] . ( 77 sec) [ -16756.2909] [ 3205] [depth= 2] . ( 77 sec) [ -16710.8392] [ 3161] [depth= 7] . ( 77 sec) [ -16683.5080] [ 3135] [depth= 13] . ( 77 sec) [ -16611.8679] [ 3122] [depth= 17] . ( 78 sec) [ -16528.9819] [ 3104] [depth= 36] . ( 78 sec) [ -16498.0791] [ 3104] [depth= 2] . ( 78 sec) [ -16495.5699] [ 3104] [depth= 2] . ( 79 sec) [ -16495.0269] [ 3104] [depth= 2] . ( 79 sec) [ -16492.1154] [ 3104] [depth= 1] . ( 79 sec) [ -16487.2347] [ 3103] [depth= 1] . ( 79 sec) [ -16421.6338] [ 3092] [depth= 3] . ( 79 sec) [ -16401.2175] [ 3091] [depth= 9] . ( 80 sec) [ -16347.8989] [ 3077] [depth= 1] . ( 80 sec) [ -16326.4477] [ 3078] [depth= 1] . ( 80 sec) [ -16317.4396] [ 3078] [depth= 1] . ( 80 sec) [ -16264.3537] [ 3074] [depth= 15] . ( 81 sec) [ -16263.9160] [ 3074] [depth= 1] . ( 81 sec) [ -16261.0096] [ 3074] [depth= 1] . ( 81 sec) [ -16254.6691] [ 3074] [depth= 1] . ( 81 sec) [ -16139.3400] [ 3026] [depth= 11] . ( 82 sec) [ -16122.2177] [ 3023] [depth= 3] . ( 82 sec) [ -16114.6972] [ 3023] [depth= 16] . ( 82 sec) [ -16105.1528] [ 3023] [depth= 14] . ( 82 sec) [ -15969.0953] [ 2985] [depth= 6] . ( 82 sec) [ -15954.5396] [ 2985] [depth= 1] . ( 83 sec) [ -15952.9299] [ 2986] [depth= 10] . ( 83 sec) [ -15894.2573] [ 2973] [depth= 9] . ( 83 sec) [ -15877.2913] [ 2965] [depth= 1] . ( 84 sec) [ -15875.7709] [ 2965] [depth= 1] . ( 84 sec) [ -15750.5459] [ 2950] [depth= 15] . ( 84 sec) [ -15639.6985] [ 2918] [depth= 2] . ( 85 sec) [ -15629.7492] [ 2915] [depth= 7] . ( 85 sec) [ -15555.1651] [ 2889] [depth= 6] . ( 85 sec) [ -15540.9392] [ 2889] [depth= 1] . ( 85 sec) [ -15538.8947] [ 2893] [depth= 1] . ( 85 sec) [ -15310.9785] [ 2880] [depth= 7] . ( 86 sec) [ -15299.6282] [ 2879] [depth= 3] . ( 86 sec) [ -15158.7701] [ 2841] [depth= 9] . ( 86 sec) [ -15076.6418] [ 2840] [depth= 3] . ( 86 sec) [ -14964.2189] [ 2845] [depth= 5] . ( 87 sec) [ -14963.1352] [ 2845] [depth= 2] . ( 87 sec) [ -14939.0960] [ 2839] [depth= 16] . ( 87 sec) [ -14915.7942] [ 2834] [depth= 2] . ( 87 sec) [ -14912.3278] [ 2837] [depth= 1] . ( 88 sec) [ -14894.9128] [ 2837] [depth= 1] . ( 88 sec) [ -14873.7287] [ 2831] [depth= 4] . ( 88 sec) [ -14868.7373] [ 2826] [depth= 1] . ( 88 sec) [ -14862.8096] [ 2826] [depth= 3] . ( 89 sec) [ -14706.0629] [ 2795] [depth= 12] . ( 89 sec) [ -14700.4537] [ 2794] [depth= 1] . ( 89 sec) [ -14627.3079] [ 2778] [depth= 11] . ( 90 sec) [ -14624.9122] [ 2779] [depth= 2] . ( 90 sec) [ -14575.1189] [ 2760] [depth= 7] . ( 90 sec) [ -14570.5214] [ 2755] [depth= 3] . ( 90 sec) [ -14462.3154] [ 2726] [depth= 7] . ( 91 sec) [ -14456.7771] [ 2718] [depth= 3] . ( 91 sec) [ -14395.7478] [ 2705] [depth= 22] . ( 91 sec) [ -14376.9745] [ 2702] [depth= 1] . ( 92 sec) [ -14217.8914] [ 2648] [depth= 22] . ( 92 sec) [ -14214.8513] [ 2649] [depth= 4] . ( 92 sec) [ -14180.9504] [ 2652] [depth= 1] . ( 92 sec) [ -14162.1205] [ 2649] [depth= 1] . ( 93 sec) [ -14035.6289] [ 2653] [depth= 1] . ( 93 sec) [ -13819.7487] [ 2593] [depth= 6] . ( 93 sec) [ -13766.1424] [ 2576] [depth= 4] . ( 93 sec) [ -13755.5737] [ 2575] [depth= 3] . ( 94 sec) [ -13752.5464] [ 2575] [depth= 1] . ( 94 sec) [ -13748.5665] [ 2575] [depth= 2] . ( 94 sec) [ -13748.0135] [ 2575] [depth= 2] . ( 95 sec) [ -13722.1225] [ 2568] [depth= 18] . ( 95 sec) [ -13721.7332] [ 2570] [depth= 7] . ( 95 sec) [ -13718.0330] [ 2568] [depth= 8] . ( 96 sec) [ -13707.5734] [ 2567] [depth= 3] . ( 96 sec) [ -13703.4801] [ 2566] [depth= 1] . ( 96 sec) [ -13601.9844] [ 2550] [depth= 8] . ( 96 sec) [ -13584.0831] [ 2548] [depth= 9] . ( 97 sec) [ -13318.4868] [ 2496] [depth= 6] . ( 97 sec) [ -13312.6992] [ 2496] [depth= 1] . ( 97 sec) [ -13303.0401] [ 2484] [depth= 1] . ( 97 sec) [ -13284.2056] [ 2485] [depth= 1] . ( 97 sec) [ -13283.7977] [ 2485] [depth= 2] . ( 98 sec) [ -13229.4168] [ 2476] [depth= 17] . ( 98 sec) [ -13225.5905] [ 2484] [depth= 1] . ( 98 sec) [ -13222.6325] [ 2479] [depth= 8] . ( 98 sec) [ -13208.6846] [ 2479] [depth= 2] . ( 99 sec) [ -13199.4939] [ 2478] [depth= 1] . ( 99 sec) [ -13198.6209] [ 2478] [depth= 3] . ( 99 sec) [ -13195.3492] [ 2476] [depth= 2] . ( 99 sec) [ -13113.1195] [ 2463] [depth= 2] . ( 99 sec) [ -13025.6316] [ 2413] [depth= 11] . ( 100 sec) [ -13013.3401] [ 2414] [depth= 1] . ( 100 sec) [ -12933.9255] [ 2389] [depth= 5] . ( 101 sec) [ -12872.6094] [ 2370] [depth= 8] . ( 101 sec) [ -12869.0091] [ 2371] [depth= 2] . ( 101 sec) [ -12868.9555] [ 2371] [depth= 1] . ( 101 sec) [ -12868.9099] [ 2371] [depth= 2] . ( 101 sec) [ -12849.1474] [ 2370] [depth= 1] . ( 102 sec) [ -12842.5885] [ 2373] [depth= 1] . ( 102 sec) [ -12837.7305] [ 2373] [depth= 1] . ( 103 sec) [ -12836.4063] [ 2373] [depth= 2] . ( 103 sec) [ -12827.9069] [ 2373] [depth= 1] . ( 103 sec) [ -12824.6503] [ 2373] [depth= 1] . ( 103 sec) [ -12818.8418] [ 2376] [depth= 2] . ( 104 sec) [ -12793.0536] [ 2376] [depth= 4] . ( 105 sec) [ -12778.0802] [ 2376] [depth= 1] . ( 106 sec) [ -12739.1638] [ 2362] [depth= 5] . ( 106 sec) [ -12724.5656] [ 2359] [depth= 1] . ( 106 sec) [ -12712.9721] [ 2359] [depth= 5] . ( 106 sec) [ -12583.6614] [ 2333] [depth= 13] . ( 107 sec) [ -12570.2328] [ 2332] [depth= 2] . ( 107 sec) [ -12567.4937] [ 2332] [depth= 1] . ( 107 sec) [ -12535.5804] [ 2350] [depth= 1] . ( 108 sec) [ -12526.1510] [ 2348] [depth= 8] . ( 108 sec) [ -12525.0165] [ 2348] [depth= 1] . ( 108 sec) [ -12515.0083] [ 2343] [depth= 1] . ( 108 sec) [ -12502.2026] [ 2342] [depth= 1] . ( 109 sec) [ -12490.5950] [ 2331] [depth= 5] . ( 109 sec) [ -12489.9013] [ 2331] [depth= 5] . ( 110 sec) [ -12477.4414] [ 2333] [depth= 1] . ( 111 sec) [ -12452.7064] [ 2327] [depth= 24] . ( 111 sec) [ -12452.1962] [ 2327] [depth= 1] . ( 112 sec) [ -12449.9917] [ 2327] [depth= 2] . ( 112 sec) [ -12424.2291] [ 2323] [depth= 1] . ( 112 sec) [ -12411.7197] [ 2323] [depth= 2] . ( 112 sec) [ -12383.7415] [ 2317] [depth= 1] . ( 113 sec) [ -12376.4466] [ 2316] [depth= 2] . ( 113 sec) [ -12373.7945] [ 2317] [depth= 9] . ( 113 sec) [ -12373.6747] [ 2316] [depth= 1] . ( 114 sec) [ -12358.5904] [ 2321] [depth= 1] . ( 114 sec) [ -12337.4663] [ 2316] [depth= 1] . ( 114 sec) [ -12330.3187] [ 2315] [depth= 1] . ( 114 sec) [ -12329.2983] [ 2313] [depth= 1] . ( 115 sec) [ -12313.7375] [ 2309] [depth= 2] . ( 115 sec) [ -12310.4364] [ 2309] [depth= 1] . ( 116 sec) [ -12303.7418] [ 2309] [depth= 1] . ( 116 sec) [ -12303.4124] [ 2310] [depth= 1] . ( 116 sec) [ -12301.7162] [ 2310] [depth= 2] . ( 117 sec) [ -12295.3031] [ 2308] [depth= 2] . ( 120 sec) [ -11869.8034] [Branch lengths ] . ( 125 sec) [ -11866.3608] [GTR parameters ] . ( 125 sec) [ -11862.2427] [Alpha ][ 0.432897] . ( 126 sec) [ -11861.9927] [ 2306] [depth= 1] . ( 126 sec) [ -11791.4527] [ 2287] [depth= 22] . ( 126 sec) [ -11790.5972] [ 2291] [depth= 1] . ( 127 sec) [ -11784.6769] [ 2294] [depth= 6] . ( 127 sec) [ -11765.2324] [ 2284] [depth= 4] . ( 129 sec) [ -11762.3086] [ 2284] [depth= 5] . ( 129 sec) [ -11761.8926] [ 2285] [depth= 1] . ( 130 sec) [ -11752.0528] [ 2281] [depth= 1] . ( 130 sec) [ -11743.1488] [ 2259] [depth= 5] . ( 130 sec) [ -11737.5110] [ 2256] [depth= 2] . ( 130 sec) [ -11686.6079] [ 2253] [depth= 6] . ( 131 sec) [ -11686.1317] [ 2253] [depth= 3] . ( 131 sec) [ -11681.2235] [ 2252] [depth= 6] . ( 132 sec) [ -11655.7990] [ 2238] [depth= 3] . ( 132 sec) [ -11633.9683] [ 2233] [depth= 5] . ( 132 sec) [ -11480.7346] [ 2182] [depth= 13] . ( 134 sec) [ -11478.3422] [ 2181] [depth= 1] . ( 135 sec) [ -11472.1260] [ 2180] [depth= 2] . ( 135 sec) [ -11472.0640] [ 2180] [depth= 2] . ( 136 sec) [ -11472.0536] [ 2180] [depth= 3] . ( 137 sec) [ -11468.7531] [ 2179] [depth= 1] . ( 137 sec) [ -11465.7816] [ 2180] [depth= 1] . ( 138 sec) [ -11465.6835] [ 2180] [depth= 4] . ( 139 sec) [ -11453.0863] [ 2167] [depth= 1] . ( 139 sec) [ -11451.5976] [ 2167] [depth= 1] . ( 141 sec) [ -11451.4894] [ 2167] [depth= 1] . ( 141 sec) [ -11451.0946] [ 2167] [depth= 2] . ( 141 sec) [ -11412.6819] [ 2117] [depth= 1] . ( 142 sec) [ -11400.1609] [ 2118] [depth= 1] . ( 144 sec) [ -11305.2922] [ 2071] [depth= 26] . ( 144 sec) [ -11305.0068] [ 2069] [depth= 1] . ( 145 sec) [ -11300.1108] [ 2058] [depth= 4] . ( 145 sec) [ -11296.1948] [ 2058] [depth= 3] . ( 145 sec) [ -11296.0599] [ 2058] [depth= 1] . ( 145 sec) [ -11296.0224] [ 2058] [depth= 4] . ( 146 sec) [ -11293.2725] [ 2057] [depth= 1] . ( 146 sec) [ -11290.1460] [ 2054] [depth= 1] . ( 147 sec) [ -11288.3584] [ 2053] [depth= 1] . ( 147 sec) [ -11188.4676] [ 2041] [depth= 3] . ( 149 sec) [ -11182.6690] [ 2039] [depth= 2] . ( 149 sec) [ -11181.3044] [ 2040] [depth= 2] . ( 150 sec) [ -11169.0656] [ 2040] [depth= 1] . ( 152 sec) [ -11168.6527] [ 2040] [depth= 1] . ( 153 sec) [ -11168.2234] [ 2041] [depth= 1] . ( 154 sec) [ -11153.8922] [ 2031] [depth= 1] . ( 154 sec) [ -11142.7007] [ 2029] [depth= 4] . ( 155 sec) [ -11115.1362] [ 1999] [depth= 5] . ( 155 sec) [ -11036.3337] [ 1968] [depth= 3] . ( 155 sec) [ -11036.3049] [ 1968] [depth= 2] . ( 155 sec) [ -10964.2208] [ 1964] [depth= 5] . ( 156 sec) [ -10964.0357] [ 1964] [depth= 6] . ( 156 sec) [ -10952.4046] [ 1962] [depth= 7] . ( 156 sec) [ -10928.8994] [ 1968] [depth= 1] . ( 157 sec) [ -10928.7827] [ 1970] [depth= 2] . ( 160 sec) [ -10928.5928] [ 1970] [depth= 1] . ( 162 sec) [ -10907.5807] [ 1964] [depth= 2] . ( 165 sec) [ -10903.3525] [ 1957] [depth= 3] . ( 166 sec) [ -10903.2056] [ 1957] [depth= 1] . ( 167 sec) [ -10903.0035] [ 1956] [depth= 2] . ( 167 sec) [ -10902.8909] [ 1956] [depth= 1] . ( 169 sec) [ -10896.3701] [ 1954] [depth= 8] . ( 169 sec) [ -10888.7364] [ 1953] [depth= 1] . ( 170 sec) [ -10878.8181] [ 1951] [depth= 2] . ( 171 sec) [ -10878.8065] [ 1951] [depth= 2] . ( 172 sec) [ -10870.8066] [ 1950] [depth= 5] . ( 172 sec) [ -10870.7030] [ 1950] [depth= 2] . ( 174 sec) [ -10870.4729] [ 1950] [depth= 2] . ( 174 sec) [ -10870.4368] [ 1950] [depth= 1] . ( 176 sec) [ -10858.7658] [ 1948] [depth= 1] . ( 177 sec) [ -10848.8480] [ 1949] [depth= 1] . ( 177 sec) [ -10809.7642] [ 1924] [depth= 1] . ( 178 sec) [ -10807.3057] [ 1924] [depth= 1] . ( 179 sec) [ -10797.9775] [ 1923] [depth= 2] . ( 181 sec) [ -10787.6248] [ 1919] [depth= 1] . ( 182 sec) [ -10787.1663] [ 1919] [depth= 1] . ( 184 sec) [ -10787.1373] [ 1919] [depth= 1] . ( 184 sec) [ -10784.4283] [ 1917] [depth= 1] . ( 185 sec) [ -10784.0286] [ 1917] [depth= 1] . ( 185 sec) [ -10774.8620] [ 1914] [depth= 1] . ( 186 sec) [ -10774.8152] [ 1914] [depth= 3] . ( 186 sec) [ -10774.7165] [ 1914] [depth= 1] . ( 186 sec) [ -10773.6882] [ 1913] [depth= 2] . ( 188 sec) [ -10773.4242] [ 1915] [depth= 1] . ( 189 sec) [ -10762.2300] [ 1915] [depth= 1] . ( 190 sec) [ -10762.2067] [ 1915] [depth= 1] . ( 191 sec) [ -10762.1412] [ 1915] [depth= 1] . ( 192 sec) [ -10762.0901] [ 1915] [depth= 2] . ( 192 sec) [ -10733.6726] [ 1903] [depth= 4] . ( 195 sec) [ -10730.1574] [ 1905] [depth= 1] . ( 195 sec) [ -10729.3446] [ 1907] [depth= 3] . ( 196 sec) [ -10729.2091] [ 1907] [depth= 1] . ( 196 sec) [ -10720.9068] [ 1905] [depth= 2] . ( 196 sec) [ -10715.8510] [ 1903] [depth= 1] . ( 198 sec) [ -10715.8071] [ 1903] [depth= 1] . ( 200 sec) [ -10705.8184] [ 1899] [depth= 2] . ( 204 sec) [ -10705.7085] [ 1899] [depth= 4] . ( 205 sec) [ -10695.3762] [ 1895] [depth= 4] . ( 207 sec) [ -10685.6609] [ 1894] [depth= 1] . ( 208 sec) [ -10684.4012] [ 1894] [depth= 1] . ( 210 sec) [ -10683.5001] [ 1893] [depth= 1] . ( 210 sec) [ -10683.4754] [ 1893] [depth= 1] . ( 211 sec) [ -10683.4577] [ 1893] [depth= 1] . ( 212 sec) [ -10683.4270] [ 1893] [depth= 1] . ( 212 sec) [ -10683.4059] [ 1893] [depth= 2] . ( 215 sec) [ -10683.3367] [ 1891] [depth= 1] . ( 217 sec) [ -10682.0751] [ 1889] [depth= 1] . ( 218 sec) [ -10682.0094] [ 1889] [depth= 1] . ( 218 sec) [ -10678.8439] [ 1892] [depth= 1] . ( 219 sec) [ -10675.1979] [ 1892] [depth= 1] . ( 219 sec) [ -10674.5792] [ 1893] [depth= 1] . ( 220 sec) [ -10674.2770] [ 1894] [depth= 1] . ( 220 sec) [ -10672.0295] [ 1891] [depth= 1] . ( 223 sec) [ -10671.9578] [ 1890] [depth= 1] . ( 223 sec) [ -10671.9212] [ 1890] [depth= 1] . ( 223 sec) [ -10671.5698] [ 1890] [depth= 1] . ( 230 sec) [ -10670.4001] [ 1895] [depth= 2] . ( 234 sec) [ -10669.5327] [ 1899] [depth= 1] . ( 234 sec) [ -10669.1242] [ 1899] [depth= 3] . ( 235 sec) [ -10667.8007] [ 1899] [depth= 2] . ( 236 sec) [ -10661.4883] [ 1898] [depth= 3] . ( 237 sec) [ -10658.1186] [ 1899] [depth= 4] . ( 237 sec) [ -10652.7501] [ 1896] [depth= 1] . ( 240 sec) [ -10652.4255] [ 1894] [depth= 1] . ( 241 sec) [ -10652.3896] [ 1895] [depth= 2] . ( 242 sec) [ -10652.3709] [ 1895] [depth= 1] . ( 242 sec) [ -10651.8584] [ 1895] [depth= 1] . ( 244 sec) [ -10651.8430] [ 1895] [depth= 1] . ( 244 sec) [ -10651.5377] [ 1895] [depth= 4] . ( 245 sec) [ -10651.4722] [ 1895] [depth= 2] . ( 247 sec) [ -10633.8258] [ 1888] [depth= 9] . ( 249 sec) [ -10630.6751] [ 1887] [depth= 5] . ( 255 sec) [ -10629.5867] [ 1886] [depth= 1] . ( 255 sec) [ -10629.5689] [ 1885] [depth= 1] . ( 259 sec) [ -10588.4089] [Branch lengths ] . ( 262 sec) [ -10586.3917] [GTR parameters ] . ( 262 sec) [ -10583.8345] [Alpha ][ 0.491151] . ( 265 sec) [ -10582.5530] [ 1884] [depth= 1] . ( 267 sec) [ -10582.4224] [ 1889] [depth= 1] . ( 274 sec) [ -10582.4104] [ 1889] [depth= 1] . ( 278 sec) [ -10580.9796] [ 1887] [depth= 3] . ( 314 sec) [ -10579.9681] [ 1888] [depth= 1] . ( 324 sec) [ -10579.9134] [ 1888] [depth= 3] . ( 350 sec) [ -10578.1717] [ 1888] [depth= 2] . ( 362 sec) [ -10577.9323] [ 1888] [depth= 2] . ( 424 sec) [ -10571.8443] [Branch lengths ] . ( 428 sec) [ -10571.8054] [GTR parameters ] . ( 428 sec) [ -10571.7756] [Alpha ][ 0.498223] . ( 488 sec) [ -10571.6687] [ 1888] [depth= 2] . ( 586 sec) [ -10565.7012] [Branch lengths ] . ( 588 sec) [ -10565.6906] [GTR parameters ] . ( 588 sec) [ -10565.6900] [Alpha ][ 0.499179] . ( 599 sec) [ -10565.6386] [ 1888] [depth= 1] . ( 739 sec) [ -10563.0505] [Branch lengths ] . ( 742 sec) [ -10563.0439] [GTR parameters ] . ( 742 sec) [ -10563.0429] [Alpha ][ 0.500456] . ( 894 sec) [ -10562.8396] [Branch lengths ] . ( 963 sec) [ -10562.6533] [ 1886] [depth= 1] . ( 1137 sec) [ -10562.4715] [Branch lengths ] . ( 1140 sec) [ -10562.4663] [GTR parameters ] . ( 1141 sec) [ -10562.4663] [Alpha ][ 0.500957] . ( 1141 sec) [ -10562.4663] [Topology ] . ( 1146 sec) [ -10562.4538] [Topology ] . ( 1150 sec) [ -10562.4485] [Topology ] . ( 1155 sec) [ -10562.4452] [Topology ] . ( 1160 sec) [ -10562.4430] [Topology ] . ( 1165 sec) [ -10562.4417] [Topology ] . ( 1170 sec) [ -10562.4408] [Topology ] . ( 1171 sec) [ -10562.4404] [GTR parameters ] . ( 1171 sec) [ -10562.4404] [Alpha ][ 0.500957] . ( 1171 sec) [ -10562.4404] [Topology ] . ( 1176 sec) [ -10562.4398] [Topology ] . ( 1177 sec) [ -10562.4398] [GTR parameters ] . ( 1177 sec) [ -10562.4398] [Alpha ][ 0.500957] . Checking for NNIs, optimizing five branches... . ( 1209 sec) [ -10562.2092] [Topology ] . Checking for NNIs, optimizing five branches... . ( 1242 sec) [ -10562.1405] [Topology ] . Checking for NNIs, optimizing five branches... . Log likelihood of the current tree: -10562.140514. . [Random start 4/ 5] . Computing pairwise distances... . Building BioNJ tree... . Randomising the tree... . Maximizing likelihood (using SPR moves)... . ( 5 sec) [ -54480.0305] [GTR parameters ] . ( 5 sec) [ -53246.0962] [Alpha ][ 0.500960] . ( 6 sec) [ -52986.1890] [ 7238] [depth= 8] . ( 6 sec) [ -52394.6532] [ 7151] [depth= 11] . ( 6 sec) [ -52204.5703] [ 7140] [depth= 3] . ( 6 sec) [ -52204.4568] [ 7136] [depth= 9] . ( 6 sec) [ -52077.2138] [ 7125] [depth= 1] . ( 7 sec) [ -52017.1654] [ 7123] [depth= 7] . ( 7 sec) [ -51765.8659] [ 7097] [depth= 3] . ( 7 sec) [ -51641.0374] [ 7095] [depth= 8] . ( 7 sec) [ -51489.2419] [ 7052] [depth= 5] . ( 8 sec) [ -51285.0771] [ 7052] [depth= 8] . ( 8 sec) [ -51190.2535] [ 7045] [depth= 14] . ( 8 sec) [ -51099.7332] [ 7042] [depth= 7] . ( 8 sec) [ -50919.9229] [ 7033] [depth= 4] . ( 8 sec) [ -50735.0554] [ 7027] [depth= 7] . ( 8 sec) [ -50674.3087] [ 7001] [depth= 8] . ( 9 sec) [ -50656.5880] [ 6999] [depth= 26] . ( 9 sec) [ -50423.4519] [ 6985] [depth= 24] . ( 9 sec) [ -50128.7072] [ 6984] [depth= 1] . ( 9 sec) [ -49852.9374] [ 6974] [depth= 1] . ( 10 sec) [ -49573.2265] [ 6954] [depth= 12] . ( 10 sec) [ -49339.1739] [ 6910] [depth= 15] . ( 10 sec) [ -49106.9445] [ 6883] [depth= 26] . ( 10 sec) [ -49014.0197] [ 6839] [depth= 1] . ( 10 sec) [ -48825.9419] [ 6814] [depth= 10] . ( 11 sec) [ -48736.7516] [ 6812] [depth= 15] . ( 11 sec) [ -48563.4531] [ 6812] [depth= 20] . ( 11 sec) [ -48392.6258] [ 6752] [depth= 15] . ( 11 sec) [ -48365.4665] [ 6749] [depth= 1] . ( 12 sec) [ -48191.5140] [ 6741] [depth= 9] . ( 12 sec) [ -48133.2199] [ 6709] [depth= 1] . ( 12 sec) [ -48020.2543] [ 6708] [depth= 2] . ( 12 sec) [ -47396.1619] [ 6701] [depth= 22] . ( 12 sec) [ -47208.3794] [ 6701] [depth= 1] . ( 13 sec) [ -46908.2277] [ 6667] [depth= 10] . ( 13 sec) [ -46803.9427] [ 6667] [depth= 1] . ( 13 sec) [ -46453.3710] [ 6594] [depth= 26] . ( 13 sec) [ -46208.0643] [ 6590] [depth= 10] . ( 14 sec) [ -46057.2092] [ 6534] [depth= 24] . ( 14 sec) [ -45968.5001] [ 6497] [depth= 21] . ( 14 sec) [ -45745.8670] [ 6468] [depth= 22] . ( 14 sec) [ -45730.5627] [ 6467] [depth= 1] . ( 15 sec) [ -45720.3369] [ 6465] [depth= 35] . ( 15 sec) [ -45425.9107] [ 6443] [depth= 18] . ( 15 sec) [ -45292.1799] [ 6413] [depth= 23] . ( 15 sec) [ -45196.7718] [ 6407] [depth= 23] . ( 16 sec) [ -44895.2481] [ 6370] [depth= 25] . ( 16 sec) [ -44605.5938] [ 6364] [depth= 22] . ( 16 sec) [ -44597.8561] [ 6365] [depth= 1] . ( 16 sec) [ -44455.2193] [ 6353] [depth= 25] . ( 16 sec) [ -44207.4110] [ 6344] [depth= 19] . ( 17 sec) [ -44143.0018] [ 6293] [depth= 16] . ( 17 sec) [ -44142.1866] [ 6294] [depth= 1] . ( 17 sec) [ -43982.1395] [ 6269] [depth= 24] . ( 17 sec) [ -43808.0335] [ 6239] [depth= 3] . ( 18 sec) [ -43797.9830] [ 6238] [depth= 1] . ( 18 sec) [ -43657.7095] [ 6209] [depth= 9] . ( 18 sec) [ -43269.9581] [ 6150] [depth= 23] . ( 19 sec) [ -43197.5163] [ 6145] [depth= 11] . ( 19 sec) [ -43194.9505] [ 6145] [depth= 1] . ( 19 sec) [ -43189.6550] [ 6124] [depth= 7] . ( 19 sec) [ -42905.2629] [ 6120] [depth= 19] . ( 19 sec) [ -41936.7418] [ 6121] [depth= 1] . ( 20 sec) [ -41792.1407] [ 6099] [depth= 26] . ( 20 sec) [ -41727.9035] [ 6092] [depth= 24] . ( 20 sec) [ -41484.5342] [ 6062] [depth= 13] . ( 20 sec) [ -41237.2741] [ 6033] [depth= 23] . ( 21 sec) [ -41147.3015] [ 6022] [depth= 24] . ( 21 sec) [ -41048.3266] [ 6019] [depth= 1] . ( 21 sec) [ -40371.9681] [ 6018] [depth= 17] . ( 21 sec) [ -40282.9730] [ 6018] [depth= 2] . ( 21 sec) [ -40275.0301] [ 6018] [depth= 1] . ( 22 sec) [ -40160.9131] [ 6003] [depth= 3] . ( 22 sec) [ -40038.8409] [ 5982] [depth= 22] . ( 22 sec) [ -39706.9469] [ 5959] [depth= 10] . ( 22 sec) [ -38835.9445] [ 5957] [depth= 3] . ( 23 sec) [ -38726.5679] [ 5941] [depth= 19] . ( 23 sec) [ -38719.7873] [ 5940] [depth= 14] . ( 23 sec) [ -38649.5625] [ 5912] [depth= 1] . ( 23 sec) [ -38468.5831] [ 5881] [depth= 21] . ( 24 sec) [ -38429.9906] [ 5881] [depth= 1] . ( 24 sec) [ -38208.8988] [ 5839] [depth= 7] . ( 24 sec) [ -38171.0478] [ 5838] [depth= 3] . ( 24 sec) [ -38098.0743] [ 5813] [depth= 22] . ( 24 sec) [ -38020.6225] [ 5807] [depth= 9] . ( 25 sec) [ -37995.0586] [ 5805] [depth= 13] . ( 25 sec) [ -37957.0634] [ 5793] [depth= 1] . ( 25 sec) [ -37838.6238] [ 5789] [depth= 4] . ( 25 sec) [ -37726.0557] [ 5780] [depth= 24] . ( 26 sec) [ -37573.0365] [ 5743] [depth= 12] . ( 26 sec) [ -37565.8604] [ 5743] [depth= 18] . ( 26 sec) [ -37073.2872] [ 5662] [depth= 12] . ( 26 sec) [ -37032.6335] [ 5642] [depth= 27] . ( 26 sec) [ -37014.3734] [ 5642] [depth= 3] . ( 27 sec) [ -36850.2539] [ 5637] [depth= 17] . ( 27 sec) [ -36844.6036] [ 5636] [depth= 1] . ( 27 sec) [ -36842.9487] [ 5640] [depth= 1] . ( 27 sec) [ -36711.4189] [ 5606] [depth= 10] . ( 28 sec) [ -35210.7199] [ 5605] [depth= 2] . ( 28 sec) [ -35172.0163] [ 5594] [depth= 2] . ( 28 sec) [ -35046.8638] [ 5586] [depth= 15] . ( 28 sec) [ -35031.0577] [ 5586] [depth= 23] . ( 29 sec) [ -35000.7551] [ 5582] [depth= 23] . ( 29 sec) [ -34992.3206] [ 5582] [depth= 1] . ( 29 sec) [ -34767.0640] [ 5554] [depth= 11] . ( 29 sec) [ -34741.5895] [ 5549] [depth= 23] . ( 30 sec) [ -34578.6948] [ 5520] [depth= 7] . ( 30 sec) [ -34570.5367] [ 5520] [depth= 1] . ( 30 sec) [ -34520.4938] [ 5503] [depth= 10] . ( 30 sec) [ -34368.1522] [ 5440] [depth= 18] . ( 31 sec) [ -34199.6560] [ 5439] [depth= 12] . ( 31 sec) [ -33980.2867] [ 5392] [depth= 14] . ( 31 sec) [ -33658.2553] [ 5391] [depth= 1] . ( 31 sec) [ -33385.6671] [ 5387] [depth= 9] . ( 31 sec) [ -33185.3866] [ 5335] [depth= 16] . ( 32 sec) [ -33178.6813] [ 5334] [depth= 1] . ( 32 sec) [ -33153.3692] [ 5333] [depth= 1] . ( 32 sec) [ -32969.8110] [ 5335] [depth= 1] . ( 32 sec) [ -32872.4649] [ 5334] [depth= 25] . ( 33 sec) [ -32737.0584] [ 5292] [depth= 18] . ( 33 sec) [ -32684.2293] [ 5283] [depth= 26] . ( 33 sec) [ -32672.2972] [ 5283] [depth= 11] . ( 33 sec) [ -32629.8246] [ 5280] [depth= 8] . ( 33 sec) [ -32565.9636] [ 5281] [depth= 1] . ( 34 sec) [ -32300.2122] [ 5225] [depth= 10] . ( 34 sec) [ -32143.7573] [ 5218] [depth= 16] . ( 34 sec) [ -31993.2096] [ 5204] [depth= 13] . ( 34 sec) [ -31807.6493] [ 5172] [depth= 10] . ( 35 sec) [ -31501.9129] [ 5173] [depth= 15] . ( 35 sec) [ -31355.5317] [ 5168] [depth= 20] . ( 35 sec) [ -31338.6252] [ 5164] [depth= 4] . ( 35 sec) [ -31222.3381] [ 5164] [depth= 2] . ( 36 sec) [ -30868.0478] [ 5147] [depth= 7] . ( 36 sec) [ -30808.5628] [ 5147] [depth= 2] . ( 36 sec) [ -30800.2997] [ 5147] [depth= 2] . ( 36 sec) [ -30681.4721] [ 5123] [depth= 16] . ( 36 sec) [ -30597.7633] [ 5122] [depth= 4] . ( 37 sec) [ -30412.4668] [ 5089] [depth= 22] . ( 37 sec) [ -30335.9053] [ 5085] [depth= 8] . ( 37 sec) [ -30290.9026] [ 5056] [depth= 27] . ( 38 sec) [ -30127.2795] [ 5046] [depth= 11] . ( 38 sec) [ -30122.0707] [ 5045] [depth= 1] . ( 38 sec) [ -30106.1662] [ 5039] [depth= 17] . ( 38 sec) [ -30096.8732] [ 5041] [depth= 1] . ( 38 sec) [ -29980.5911] [ 5019] [depth= 8] . ( 39 sec) [ -29841.2249] [ 4972] [depth= 8] . ( 39 sec) [ -29770.4792] [ 4972] [depth= 1] . ( 39 sec) [ -29767.8589] [ 4972] [depth= 1] . ( 39 sec) [ -29741.1308] [ 4972] [depth= 2] . ( 39 sec) [ -29611.2898] [ 4943] [depth= 6] . ( 40 sec) [ -29600.6510] [ 4943] [depth= 1] . ( 40 sec) [ -29595.5132] [ 4941] [depth= 2] . ( 40 sec) [ -29586.2910] [ 4940] [depth= 1] . ( 40 sec) [ -29485.9204] [ 4926] [depth= 25] . ( 41 sec) [ -29481.1019] [ 4925] [depth= 1] . ( 41 sec) [ -29194.3078] [ 4910] [depth= 8] . ( 41 sec) [ -29020.0476] [ 4864] [depth= 8] . ( 42 sec) [ -28966.3890] [ 4865] [depth= 20] . ( 42 sec) [ -28922.9091] [ 4854] [depth= 8] . ( 42 sec) [ -28690.4147] [ 4807] [depth= 13] . ( 42 sec) [ -28524.3763] [ 4790] [depth= 14] . ( 43 sec) [ -28511.0352] [ 4790] [depth= 1] . ( 43 sec) [ -28446.2373] [ 4785] [depth= 11] . ( 43 sec) [ -28167.5336] [ 4790] [depth= 18] . ( 43 sec) [ -27122.3748] [ 4790] [depth= 17] . ( 44 sec) [ -26952.1567] [ 4724] [depth= 19] . ( 44 sec) [ -26775.3639] [ 4725] [depth= 18] . ( 44 sec) [ -26231.3680] [ 4713] [depth= 6] . ( 44 sec) [ -26221.7066] [ 4714] [depth= 2] . ( 45 sec) [ -26208.5766] [ 4710] [depth= 1] . ( 45 sec) [ -26203.4256] [ 4709] [depth= 1] . ( 45 sec) [ -26193.0348] [ 4710] [depth= 1] . ( 45 sec) [ -26118.2533] [ 4671] [depth= 17] . ( 46 sec) [ -26115.4756] [ 4670] [depth= 1] . ( 46 sec) [ -26014.5299] [ 4602] [depth= 15] . ( 46 sec) [ -25938.5467] [ 4607] [depth= 18] . ( 46 sec) [ -25821.6853] [ 4573] [depth= 18] . ( 47 sec) [ -25661.2242] [ 4528] [depth= 18] . ( 47 sec) [ -25659.5699] [ 4527] [depth= 13] . ( 47 sec) [ -25649.0118] [ 4530] [depth= 1] . ( 47 sec) [ -25014.1178] [ 4513] [depth= 3] . ( 48 sec) [ -24989.3352] [ 4513] [depth= 19] . ( 48 sec) [ -24981.2035] [ 4512] [depth= 2] . ( 48 sec) [ -24973.2426] [ 4511] [depth= 13] . ( 48 sec) [ -24811.7721] [ 4497] [depth= 9] . ( 48 sec) [ -24303.2791] [ 4500] [depth= 1] . ( 49 sec) [ -24302.2330] [ 4500] [depth= 1] . ( 49 sec) [ -24096.2766] [ 4444] [depth= 16] . ( 49 sec) [ -24080.4311] [ 4444] [depth= 1] . ( 49 sec) [ -23987.3766] [ 4383] [depth= 16] . ( 50 sec) [ -23836.1588] [ 4384] [depth= 1] . ( 50 sec) [ -23814.9737] [ 4383] [depth= 17] . ( 50 sec) [ -23464.6984] [ 4365] [depth= 11] . ( 50 sec) [ -23409.2424] [ 4356] [depth= 14] . ( 51 sec) [ -23407.1367] [ 4357] [depth= 1] . ( 51 sec) [ -23404.8455] [ 4357] [depth= 1] . ( 51 sec) [ -23387.6968] [ 4356] [depth= 12] . ( 51 sec) [ -23219.4044] [ 4330] [depth= 13] . ( 52 sec) [ -22983.4666] [ 4276] [depth= 8] . ( 52 sec) [ -22981.8946] [ 4276] [depth= 1] . ( 52 sec) [ -22977.4384] [ 4277] [depth= 17] . ( 52 sec) [ -22975.8454] [ 4277] [depth= 2] . ( 53 sec) [ -22792.7693] [ 4282] [depth= 17] . ( 53 sec) [ -22744.5849] [ 4272] [depth= 16] . ( 53 sec) [ -22648.9818] [ 4269] [depth= 11] . ( 53 sec) [ -22589.8256] [ 4267] [depth= 1] . ( 54 sec) [ -22464.2157] [ 4200] [depth= 15] . ( 54 sec) [ -22369.7338] [ 4198] [depth= 2] . ( 54 sec) [ -22295.3832] [ 4127] [depth= 13] . ( 54 sec) [ -22295.0963] [ 4127] [depth= 2] . ( 55 sec) [ -22235.7453] [ 4127] [depth= 3] . ( 55 sec) [ -22233.4453] [ 4127] [depth= 1] . ( 55 sec) [ -22183.2113] [ 4113] [depth= 20] . ( 55 sec) [ -22151.3240] [ 4111] [depth= 2] . ( 56 sec) [ -22006.6604] [ 4101] [depth= 8] . ( 56 sec) [ -21811.6487] [ 4098] [depth= 1] . ( 56 sec) [ -21757.6793] [ 4078] [depth= 3] . ( 56 sec) [ -20962.1940] [ 4075] [depth= 3] . ( 56 sec) [ -20778.6758] [ 3976] [depth= 5] . ( 57 sec) [ -20722.8924] [ 3971] [depth= 14] . ( 57 sec) [ -20712.8114] [ 3971] [depth= 2] . ( 57 sec) [ -20698.4678] [ 3974] [depth= 10] . ( 57 sec) [ -20557.3566] [ 3964] [depth= 13] . ( 57 sec) [ -20500.0994] [ 3946] [depth= 1] . ( 58 sec) [ -20447.1169] [ 3915] [depth= 14] . ( 58 sec) [ -20221.2695] [ 3866] [depth= 16] . ( 58 sec) [ -20068.7308] [ 3824] [depth= 12] . ( 58 sec) [ -19960.0899] [ 3802] [depth= 1] . ( 59 sec) [ -19939.4052] [ 3800] [depth= 20] . ( 59 sec) [ -19929.7830] [ 3795] [depth= 12] . ( 59 sec) [ -19846.1936] [ 3794] [depth= 17] . ( 60 sec) [ -19844.7409] [ 3795] [depth= 1] . ( 60 sec) [ -19632.8858] [ 3775] [depth= 10] . ( 60 sec) [ -19539.5921] [ 3704] [depth= 6] . ( 61 sec) [ -19536.5332] [ 3704] [depth= 2] . ( 61 sec) [ -19380.0042] [ 3691] [depth= 3] . ( 61 sec) [ -19275.7488] [ 3644] [depth= 10] . ( 61 sec) [ -19231.1405] [ 3643] [depth= 1] . ( 61 sec) [ -18930.3300] [ 3625] [depth= 4] . ( 62 sec) [ -18865.6603] [ 3611] [depth= 6] . ( 62 sec) [ -18863.7017] [ 3611] [depth= 13] . ( 62 sec) [ -18840.5611] [ 3610] [depth= 1] . ( 62 sec) [ -18833.5349] [ 3610] [depth= 4] . ( 63 sec) [ -18659.3217] [ 3579] [depth= 16] . ( 63 sec) [ -18628.0439] [ 3576] [depth= 5] . ( 63 sec) [ -18627.2186] [ 3571] [depth= 3] . ( 63 sec) [ -18504.4513] [ 3570] [depth= 7] . ( 64 sec) [ -18438.0195] [ 3565] [depth= 3] . ( 64 sec) [ -18428.8069] [ 3564] [depth= 6] . ( 64 sec) [ -18392.7087] [ 3559] [depth= 1] . ( 64 sec) [ -18388.9642] [ 3559] [depth= 1] . ( 64 sec) [ -18083.6620] [ 3558] [depth= 2] . ( 65 sec) [ -17860.1038] [ 3511] [depth= 1] . ( 65 sec) [ -17795.8702] [ 3489] [depth= 14] . ( 65 sec) [ -17642.6759] [ 3422] [depth= 7] . ( 65 sec) [ -17588.1154] [ 3421] [depth= 2] . ( 66 sec) [ -17572.6993] [ 3391] [depth= 7] . ( 66 sec) [ -17532.5086] [ 3391] [depth= 1] . ( 66 sec) [ -17509.0280] [ 3387] [depth= 13] . ( 66 sec) [ -17477.6850] [ 3387] [depth= 3] . ( 67 sec) [ -17231.5363] [ 3363] [depth= 6] . ( 67 sec) [ -17173.9999] [ 3355] [depth= 11] . ( 67 sec) [ -17148.7789] [ 3351] [depth= 4] . ( 67 sec) [ -17118.0327] [ 3347] [depth= 17] . ( 67 sec) [ -17062.6249] [ 3331] [depth= 3] . ( 68 sec) [ -16690.3274] [ 3331] [depth= 3] . ( 68 sec) [ -16683.1289] [ 3329] [depth= 3] . ( 68 sec) [ -16631.3343] [ 3283] [depth= 8] . ( 68 sec) [ -16586.7515] [ 3280] [depth= 8] . ( 68 sec) [ -16578.8840] [ 3280] [depth= 3] . ( 69 sec) [ -16578.3181] [ 3280] [depth= 4] . ( 69 sec) [ -16553.8147] [ 3279] [depth= 2] . ( 69 sec) [ -16546.3907] [ 3278] [depth= 18] . ( 70 sec) [ -16438.8483] [ 3248] [depth= 10] . ( 70 sec) [ -16423.0910] [ 3245] [depth= 5] . ( 70 sec) [ -16263.3331] [ 3216] [depth= 10] . ( 70 sec) [ -16173.7212] [ 3214] [depth= 1] . ( 70 sec) [ -16073.3451] [ 3205] [depth= 8] . ( 71 sec) [ -16070.9788] [ 3209] [depth= 1] . ( 71 sec) [ -15848.4096] [ 3208] [depth= 2] . ( 71 sec) [ -15430.7514] [ 3184] [depth= 19] . ( 71 sec) [ -15420.2153] [ 3183] [depth= 1] . ( 72 sec) [ -15369.6574] [ 3160] [depth= 3] . ( 72 sec) [ -15367.4275] [ 3152] [depth= 1] . ( 72 sec) [ -15359.3444] [ 3152] [depth= 1] . ( 72 sec) [ -15346.4700] [ 3150] [depth= 2] . ( 72 sec) [ -15343.8674] [ 3150] [depth= 2] . ( 73 sec) [ -15343.4268] [ 3150] [depth= 3] . ( 73 sec) [ -15336.5073] [ 3150] [depth= 1] . ( 73 sec) [ -15269.3598] [ 3133] [depth= 3] . ( 74 sec) [ -15259.9716] [ 3131] [depth= 2] . ( 74 sec) [ -15129.5807] [ 3095] [depth= 12] . ( 74 sec) [ -15125.4651] [ 3095] [depth= 1] . ( 74 sec) [ -15035.7705] [ 3076] [depth= 7] . ( 75 sec) [ -14978.2204] [ 3054] [depth= 23] . ( 75 sec) [ -14977.5491] [ 3061] [depth= 1] . ( 75 sec) [ -14962.9581] [ 3065] [depth= 1] . ( 75 sec) [ -14946.5530] [ 3058] [depth= 1] . ( 76 sec) [ -14943.4410] [ 3056] [depth= 4] . ( 76 sec) [ -14935.7996] [ 3046] [depth= 3] . ( 76 sec) [ -14882.4921] [ 2996] [depth= 21] . ( 76 sec) [ -14880.0561] [ 2996] [depth= 1] . ( 77 sec) [ -14867.4482] [ 2996] [depth= 1] . ( 77 sec) [ -14835.1214] [ 2996] [depth= 1] . ( 78 sec) [ -14704.2427] [ 2957] [depth= 13] . ( 78 sec) [ -14652.0271] [ 2950] [depth= 1] . ( 78 sec) [ -14646.9668] [ 2953] [depth= 1] . ( 78 sec) [ -14585.4122] [ 2924] [depth= 22] . ( 78 sec) [ -14565.2087] [ 2924] [depth= 1] . ( 79 sec) [ -14550.7874] [ 2911] [depth= 1] . ( 79 sec) [ -14550.3001] [ 2914] [depth= 6] . ( 79 sec) [ -14541.2340] [ 2912] [depth= 1] . ( 79 sec) [ -14534.2981] [ 2912] [depth= 4] . ( 80 sec) [ -14533.8968] [ 2914] [depth= 1] . ( 80 sec) [ -14509.4957] [ 2916] [depth= 3] . ( 80 sec) [ -14496.1379] [ 2916] [depth= 1] . ( 80 sec) [ -14495.9569] [ 2916] [depth= 1] . ( 81 sec) [ -14265.7343] [ 2858] [depth= 12] . ( 81 sec) [ -14260.4587] [ 2858] [depth= 2] . ( 81 sec) [ -14248.0442] [ 2854] [depth= 1] . ( 81 sec) [ -14243.4100] [ 2852] [depth= 7] . ( 82 sec) [ -14237.0952] [ 2845] [depth= 1] . ( 82 sec) [ -14228.6412] [ 2809] [depth= 8] . ( 82 sec) [ -14212.1519] [ 2808] [depth= 7] . ( 82 sec) [ -14211.8981] [ 2808] [depth= 1] . ( 82 sec) [ -14210.7158] [ 2809] [depth= 9] . ( 83 sec) [ -14177.7389] [ 2809] [depth= 10] . ( 83 sec) [ -14168.7087] [ 2808] [depth= 6] . ( 83 sec) [ -13991.0056] [ 2779] [depth= 4] . ( 83 sec) [ -13976.0323] [ 2779] [depth= 2] . ( 84 sec) [ -13901.2325] [ 2741] [depth= 1] . ( 84 sec) [ -13828.3150] [ 2707] [depth= 10] . ( 84 sec) [ -13826.3658] [ 2706] [depth= 4] . ( 85 sec) [ -13656.2629] [ 2628] [depth= 7] . ( 85 sec) [ -13655.4053] [ 2629] [depth= 1] . ( 85 sec) [ -13650.9152] [ 2629] [depth= 1] . ( 85 sec) [ -13645.9677] [ 2629] [depth= 1] . ( 85 sec) [ -13450.3680] [ 2586] [depth= 8] . ( 86 sec) [ -13438.0265] [ 2588] [depth= 1] . ( 86 sec) [ -13435.9106] [ 2586] [depth= 2] . ( 87 sec) [ -13435.7453] [ 2586] [depth= 5] . ( 88 sec) [ -13435.5875] [ 2586] [depth= 1] . ( 88 sec) [ -13434.9532] [ 2586] [depth= 2] . ( 88 sec) [ -13434.1212] [ 2586] [depth= 1] . ( 88 sec) [ -13414.8768] [ 2583] [depth= 6] . ( 89 sec) [ -13407.0339] [ 2582] [depth= 3] . ( 89 sec) [ -13376.1963] [ 2563] [depth= 2] . ( 89 sec) [ -13359.8777] [ 2561] [depth= 6] . ( 89 sec) [ -13347.4158] [ 2560] [depth= 3] . ( 90 sec) [ -13216.3201] [ 2528] [depth= 4] . ( 90 sec) [ -13214.8406] [ 2517] [depth= 1] . ( 90 sec) [ -13212.1651] [ 2517] [depth= 1] . ( 90 sec) [ -13210.7413] [ 2517] [depth= 1] . ( 92 sec) [ -13204.1288] [ 2518] [depth= 1] . ( 92 sec) [ -13185.2741] [ 2515] [depth= 4] . ( 92 sec) [ -13185.2240] [ 2515] [depth= 2] . ( 93 sec) [ -13174.7466] [ 2513] [depth= 1] . ( 94 sec) [ -13158.8506] [ 2513] [depth= 1] . ( 94 sec) [ -13157.7688] [ 2513] [depth= 1] . ( 94 sec) [ -13114.0061] [ 2501] [depth= 26] . ( 95 sec) [ -13103.8825] [ 2499] [depth= 3] . ( 95 sec) [ -13099.4105] [ 2499] [depth= 1] . ( 95 sec) [ -13098.9726] [ 2499] [depth= 4] . ( 95 sec) [ -13036.4702] [ 2481] [depth= 3] . ( 95 sec) [ -12960.1743] [ 2467] [depth= 5] . ( 96 sec) [ -12956.4384] [ 2467] [depth= 2] . ( 97 sec) [ -12857.6258] [ 2447] [depth= 1] . ( 97 sec) [ -12833.1374] [ 2444] [depth= 9] . ( 97 sec) [ -12828.6159] [ 2445] [depth= 1] . ( 97 sec) [ -12807.3544] [ 2441] [depth= 10] . ( 97 sec) [ -12795.0097] [ 2436] [depth= 1] . ( 98 sec) [ -12699.0866] [ 2410] [depth= 4] . ( 98 sec) [ -12686.6059] [ 2409] [depth= 1] . ( 98 sec) [ -12684.0208] [ 2409] [depth= 1] . ( 99 sec) [ -12670.1341] [ 2407] [depth= 3] . ( 99 sec) [ -12648.7394] [ 2398] [depth= 1] . ( 99 sec) [ -12648.6145] [ 2398] [depth= 1] . ( 99 sec) [ -12648.3745] [ 2398] [depth= 1] . ( 100 sec) [ -12647.0811] [ 2399] [depth= 1] . ( 100 sec) [ -12647.0489] [ 2399] [depth= 2] . ( 100 sec) [ -12588.7050] [ 2389] [depth= 2] . ( 101 sec) [ -12559.4678] [ 2374] [depth= 12] . ( 101 sec) [ -12518.7690] [ 2366] [depth= 5] . ( 101 sec) [ -12506.7439] [ 2363] [depth= 2] . ( 102 sec) [ -12506.5854] [ 2363] [depth= 1] . ( 103 sec) [ -12492.2368] [ 2364] [depth= 1] . ( 103 sec) [ -12485.8984] [ 2364] [depth= 2] . ( 103 sec) [ -12365.7545] [ 2330] [depth= 22] . ( 104 sec) [ -12341.1507] [ 2327] [depth= 1] . ( 104 sec) [ -12322.6218] [ 2325] [depth= 2] . ( 104 sec) [ -12319.0116] [ 2325] [depth= 2] . ( 104 sec) [ -12307.0741] [ 2326] [depth= 1] . ( 104 sec) [ -12306.9826] [ 2326] [depth= 2] . ( 105 sec) [ -12305.0606] [ 2326] [depth= 2] . ( 107 sec) [ -11849.5157] [Branch lengths ] . ( 115 sec) [ -11785.7552] [GTR parameters ] . ( 116 sec) [ -11779.1561] [Alpha ][ 0.417910] . ( 116 sec) [ -11777.2340] [ 2326] [depth= 1] . ( 116 sec) [ -11768.6113] [ 2325] [depth= 6] . ( 116 sec) [ -11739.4188] [ 2285] [depth= 11] . ( 117 sec) [ -11739.3801] [ 2285] [depth= 1] . ( 117 sec) [ -11719.8114] [ 2275] [depth= 1] . ( 117 sec) [ -11717.0839] [ 2274] [depth= 1] . ( 118 sec) [ -11714.8662] [ 2246] [depth= 4] . ( 118 sec) [ -11714.6157] [ 2246] [depth= 2] . ( 118 sec) [ -11708.6103] [ 2245] [depth= 6] . ( 119 sec) [ -11575.0101] [ 2186] [depth= 23] . ( 119 sec) [ -11567.6521] [ 2180] [depth= 1] . ( 119 sec) [ -11545.4390] [ 2170] [depth= 5] . ( 119 sec) [ -11545.3206] [ 2170] [depth= 1] . ( 121 sec) [ -11544.9448] [ 2169] [depth= 2] . ( 121 sec) [ -11446.5230] [ 2149] [depth= 13] . ( 121 sec) [ -11442.7225] [ 2151] [depth= 1] . ( 122 sec) [ -11430.3074] [ 2150] [depth= 5] . ( 122 sec) [ -11427.2159] [ 2148] [depth= 3] . ( 123 sec) [ -11419.6866] [ 2147] [depth= 2] . ( 123 sec) [ -11411.7086] [ 2146] [depth= 2] . ( 123 sec) [ -11403.2261] [ 2143] [depth= 2] . ( 124 sec) [ -11358.0169] [ 2116] [depth= 15] . ( 124 sec) [ -11354.4412] [ 2116] [depth= 2] . ( 125 sec) [ -11354.4222] [ 2116] [depth= 2] . ( 127 sec) [ -11354.4070] [ 2116] [depth= 1] . ( 130 sec) [ -11335.2033] [ 2118] [depth= 7] . ( 130 sec) [ -11335.1529] [ 2120] [depth= 1] . ( 131 sec) [ -11335.1379] [ 2120] [depth= 1] . ( 134 sec) [ -11335.0906] [ 2119] [depth= 1] . ( 134 sec) [ -11334.8347] [ 2119] [depth= 1] . ( 137 sec) [ -11334.6340] [ 2119] [depth= 1] . ( 137 sec) [ -11331.0556] [ 2118] [depth= 6] . ( 137 sec) [ -11330.5644] [ 2118] [depth= 5] . ( 139 sec) [ -11330.0649] [ 2118] [depth= 1] . ( 140 sec) [ -11297.5849] [ 2114] [depth= 21] . ( 142 sec) [ -11297.5723] [ 2114] [depth= 1] . ( 143 sec) [ -11294.1975] [ 2114] [depth= 3] . ( 144 sec) [ -11291.3128] [ 2099] [depth= 1] . ( 145 sec) [ -11290.7257] [ 2097] [depth= 1] . ( 145 sec) [ -11289.1081] [ 2087] [depth= 10] . ( 147 sec) [ -11288.7058] [ 2087] [depth= 1] . ( 147 sec) [ -11287.8509] [ 2086] [depth= 1] . ( 148 sec) [ -11287.7446] [ 2086] [depth= 2] . ( 150 sec) [ -11287.2046] [ 2086] [depth= 1] . ( 150 sec) [ -11285.8463] [ 2086] [depth= 1] . ( 151 sec) [ -11285.8353] [ 2086] [depth= 1] . ( 151 sec) [ -11278.6810] [ 2085] [depth= 1] . ( 154 sec) [ -11272.2155] [ 2084] [depth= 4] . ( 154 sec) [ -11254.3050] [ 2079] [depth= 2] . ( 155 sec) [ -11254.2265] [ 2079] [depth= 1] . ( 156 sec) [ -11253.9424] [ 2079] [depth= 1] . ( 158 sec) [ -11239.0464] [ 2071] [depth= 11] . ( 158 sec) [ -11236.4745] [ 2070] [depth= 2] . ( 159 sec) [ -11229.9620] [ 2069] [depth= 5] . ( 160 sec) [ -11227.4608] [ 2073] [depth= 4] . ( 160 sec) [ -11224.3318] [ 2073] [depth= 2] . ( 160 sec) [ -11222.9454] [ 2072] [depth= 1] . ( 161 sec) [ -11218.8792] [ 2071] [depth= 6] . ( 161 sec) [ -11218.5403] [ 2071] [depth= 2] . ( 161 sec) [ -11209.4289] [ 2071] [depth= 5] . ( 163 sec) [ -11207.4248] [ 2072] [depth= 1] . ( 163 sec) [ -11207.4129] [ 2072] [depth= 1] . ( 164 sec) [ -11197.1576] [ 2070] [depth= 2] . ( 164 sec) [ -11196.1450] [ 2070] [depth= 1] . ( 165 sec) [ -11195.8533] [ 2070] [depth= 1] . ( 167 sec) [ -11138.0289] [ 2045] [depth= 6] . ( 167 sec) [ -11137.7843] [ 2045] [depth= 1] . ( 169 sec) [ -11131.7108] [ 2044] [depth= 1] . ( 170 sec) [ -11131.3419] [ 2044] [depth= 2] . ( 171 sec) [ -11130.6239] [ 2046] [depth= 2] . ( 171 sec) [ -11121.8162] [ 2044] [depth= 1] . ( 173 sec) [ -11113.0920] [ 2043] [depth= 1] . ( 173 sec) [ -11070.8119] [ 2044] [depth= 2] . ( 173 sec) [ -11066.1074] [ 2043] [depth= 6] . ( 173 sec) [ -11065.7043] [ 2043] [depth= 1] . ( 174 sec) [ -11061.3731] [ 2042] [depth= 1] . ( 174 sec) [ -11061.2593] [ 2042] [depth= 1] . ( 175 sec) [ -11049.2086] [ 2040] [depth= 2] . ( 175 sec) [ -11043.9902] [ 2037] [depth= 1] . ( 176 sec) [ -11043.9064] [ 2037] [depth= 1] . ( 177 sec) [ -11036.9469] [ 2037] [depth= 1] . ( 177 sec) [ -11036.8347] [ 2036] [depth= 2] . ( 177 sec) [ -11036.7638] [ 2036] [depth= 1] . ( 177 sec) [ -10995.2811] [ 2012] [depth= 13] . ( 178 sec) [ -10910.6849] [ 1981] [depth= 10] . ( 178 sec) [ -10895.9986] [ 1981] [depth= 3] . ( 179 sec) [ -10895.5229] [ 1981] [depth= 2] . ( 179 sec) [ -10895.2966] [ 1981] [depth= 1] . ( 180 sec) [ -10895.2817] [ 1981] [depth= 1] . ( 182 sec) [ -10895.1001] [ 1981] [depth= 2] . ( 182 sec) [ -10890.1100] [ 1982] [depth= 1] . ( 183 sec) [ -10864.1484] [ 1983] [depth= 2] . ( 183 sec) [ -10861.9314] [ 1985] [depth= 2] . ( 184 sec) [ -10858.4314] [ 1987] [depth= 1] . ( 185 sec) [ -10858.3149] [ 1989] [depth= 1] . ( 186 sec) [ -10857.1092] [ 1989] [depth= 1] . ( 188 sec) [ -10857.0337] [ 1989] [depth= 3] . ( 189 sec) [ -10854.6515] [ 1989] [depth= 1] . ( 189 sec) [ -10847.2065] [ 1985] [depth= 3] . ( 190 sec) [ -10841.0382] [ 1983] [depth= 2] . ( 190 sec) [ -10831.0048] [ 1983] [depth= 1] . ( 191 sec) [ -10830.9840] [ 1983] [depth= 2] . ( 193 sec) [ -10830.8945] [ 1983] [depth= 1] . ( 195 sec) [ -10827.1251] [ 1982] [depth= 2] . ( 196 sec) [ -10812.1164] [ 1979] [depth= 1] . ( 197 sec) [ -10810.5489] [ 1979] [depth= 1] . ( 197 sec) [ -10810.4099] [ 1979] [depth= 2] . ( 199 sec) [ -10806.6853] [ 1978] [depth= 1] . ( 199 sec) [ -10803.4497] [ 1977] [depth= 1] . ( 201 sec) [ -10721.8517] [ 1930] [depth= 21] . ( 201 sec) [ -10721.4767] [ 1930] [depth= 1] . ( 202 sec) [ -10720.9036] [ 1930] [depth= 1] . ( 203 sec) [ -10720.8359] [ 1930] [depth= 1] . ( 203 sec) [ -10718.7784] [ 1929] [depth= 1] . ( 204 sec) [ -10716.0260] [ 1927] [depth= 2] . ( 206 sec) [ -10715.3604] [ 1927] [depth= 1] . ( 210 sec) [ -10714.2689] [ 1926] [depth= 1] . ( 210 sec) [ -10713.1656] [ 1927] [depth= 1] . ( 210 sec) [ -10711.2939] [ 1930] [depth= 2] . ( 210 sec) [ -10709.1723] [ 1930] [depth= 1] . ( 212 sec) [ -10707.3397] [ 1929] [depth= 1] . ( 212 sec) [ -10707.1068] [ 1929] [depth= 2] . ( 215 sec) [ -10707.0060] [ 1929] [depth= 1] . ( 217 sec) [ -10706.9284] [ 1929] [depth= 1] . ( 218 sec) [ -10706.5035] [ 1929] [depth= 2] . ( 218 sec) [ -10706.3398] [ 1929] [depth= 4] . ( 219 sec) [ -10706.2298] [ 1929] [depth= 1] . ( 220 sec) [ -10706.1601] [ 1929] [depth= 3] . ( 220 sec) [ -10705.6599] [ 1931] [depth= 2] . ( 223 sec) [ -10705.3571] [ 1930] [depth= 3] . ( 224 sec) [ -10705.3298] [ 1930] [depth= 2] . ( 230 sec) [ -10704.6831] [ 1930] [depth= 2] . ( 230 sec) [ -10690.6503] [ 1926] [depth= 1] . ( 231 sec) [ -10690.4816] [ 1926] [depth= 4] . ( 232 sec) [ -10690.1633] [ 1926] [depth= 2] . ( 232 sec) [ -10688.0822] [ 1925] [depth= 1] . ( 233 sec) [ -10687.4103] [ 1927] [depth= 1] . ( 233 sec) [ -10685.0014] [ 1932] [depth= 1] . ( 235 sec) [ -10682.4971] [ 1933] [depth= 1] . ( 236 sec) [ -10682.4741] [ 1933] [depth= 1] . ( 236 sec) [ -10682.4590] [ 1933] [depth= 2] . ( 237 sec) [ -10682.4391] [ 1933] [depth= 1] . ( 237 sec) [ -10682.3049] [ 1932] [depth= 1] . ( 237 sec) [ -10682.2553] [ 1932] [depth= 1] . ( 240 sec) [ -10671.8199] [ 1928] [depth= 5] . ( 240 sec) [ -10671.7232] [ 1928] [depth= 2] . ( 240 sec) [ -10671.7088] [ 1928] [depth= 2] . ( 242 sec) [ -10671.6390] [ 1929] [depth= 1] . ( 242 sec) [ -10670.7827] [ 1928] [depth= 1] . ( 246 sec) [ -10670.4228] [ 1928] [depth= 1] . ( 247 sec) [ -10670.3188] [ 1928] [depth= 1] . ( 247 sec) [ -10670.2859] [ 1928] [depth= 2] . ( 248 sec) [ -10670.2664] [ 1928] [depth= 2] . ( 250 sec) [ -10622.7138] [Branch lengths ] . ( 258 sec) [ -10622.1658] [GTR parameters ] . ( 258 sec) [ -10619.1105] [Alpha ][ 0.478506] . ( 263 sec) [ -10616.1986] [ 1930] [depth= 1] . ( 263 sec) [ -10615.8902] [ 1927] [depth= 5] . ( 264 sec) [ -10601.6248] [ 1910] [depth= 9] . ( 272 sec) [ -10601.6079] [ 1910] [depth= 3] . ( 275 sec) [ -10600.8971] [ 1906] [depth= 2] . ( 275 sec) [ -10600.7581] [ 1908] [depth= 2] . ( 285 sec) [ -10599.3196] [ 1909] [depth= 1] . ( 291 sec) [ -10596.5684] [ 1907] [depth= 1] . ( 296 sec) [ -10591.7732] [ 1906] [depth= 1] . ( 298 sec) [ -10591.7585] [ 1905] [depth= 1] . ( 303 sec) [ -10591.7474] [ 1905] [depth= 1] . ( 306 sec) [ -10591.7281] [ 1905] [depth= 1] . ( 311 sec) [ -10591.2629] [ 1903] [depth= 1] . ( 324 sec) [ -10585.6721] [ 1894] [depth= 11] . ( 335 sec) [ -10584.7098] [ 1891] [depth= 1] . ( 336 sec) [ -10580.8521] [ 1888] [depth= 2] . ( 342 sec) [ -10580.0220] [ 1891] [depth= 1] . ( 352 sec) [ -10577.3494] [ 1892] [depth= 1] . ( 353 sec) [ -10575.8417] [ 1892] [depth= 2] . ( 365 sec) [ -10574.9667] [ 1889] [depth= 1] . ( 367 sec) [ -10574.9305] [ 1889] [depth= 2] . ( 378 sec) [ -10574.5397] [ 1892] [depth= 1] . ( 391 sec) [ -10574.5238] [ 1892] [depth= 2] . ( 394 sec) [ -10574.4571] [ 1894] [depth= 2] . ( 394 sec) [ -10572.7603] [ 1893] [depth= 1] . ( 401 sec) [ -10572.1329] [ 1893] [depth= 2] . ( 403 sec) [ -10571.5460] [ 1893] [depth= 1] . ( 407 sec) [ -10570.9494] [ 1892] [depth= 1] . ( 411 sec) [ -10562.8037] [Branch lengths ] . ( 416 sec) [ -10562.5121] [GTR parameters ] . ( 416 sec) [ -10562.3721] [Alpha ][ 0.493081] . ( 476 sec) [ -10562.3392] [ 1892] [depth= 1] . ( 511 sec) [ -10562.2686] [ 1892] [depth= 4] . ( 572 sec) [ -10561.1232] [Branch lengths ] . ( 578 sec) [ -10561.1153] [GTR parameters ] . ( 578 sec) [ -10561.1148] [Alpha ][ 0.494022] . ( 727 sec) [ -10560.8408] [Branch lengths ] . ( 969 sec) [ -10560.7603] [Branch lengths ] . ( 969 sec) [ -10560.7603] [Topology ] . ( 974 sec) [ -10560.7457] [Topology ] . ( 978 sec) [ -10560.7388] [Topology ] . ( 983 sec) [ -10560.7347] [Topology ] . ( 988 sec) [ -10560.7321] [Topology ] . ( 993 sec) [ -10560.7305] [Topology ] . ( 998 sec) [ -10560.7295] [Topology ] . ( 999 sec) [ -10560.7294] [GTR parameters ] . ( 999 sec) [ -10560.7294] [Alpha ][ 0.494516] . ( 999 sec) [ -10560.7294] [Topology ] . ( 1004 sec) [ -10560.7287] [Topology ] . ( 1009 sec) [ -10560.7231] [GTR parameters ] . ( 1009 sec) [ -10560.7231] [Alpha ][ 0.494516] . ( 1009 sec) [ -10560.7231] [Topology ] . ( 1014 sec) [ -10560.7224] [Topology ] . ( 1015 sec) [ -10560.7224] [GTR parameters ] . ( 1015 sec) [ -10560.7224] [Alpha ][ 0.494516] . Checking for NNIs, optimizing five branches... . ( 1047 sec) [ -10560.7216] [Topology ] . Checking for NNIs, optimizing five branches... . ( 1079 sec) [ -10560.7215] [Topology ] . Checking for NNIs, optimizing five branches... . ( 1111 sec) [ -10560.7213] [Topology ] . Checking for NNIs, optimizing five branches... . Log likelihood of the current tree: -10560.721348. . [Random start 5/ 5] . Computing pairwise distances... . Building BioNJ tree... . Randomising the tree... . Maximizing likelihood (using SPR moves)... . ( 5 sec) [ -49967.6241] [GTR parameters ] . ( 6 sec) [ -48704.3972] [Alpha ][ 0.500960] . ( 6 sec) [ -48107.2565] [ 7096] [depth= 9] . ( 7 sec) [ -47269.9065] [ 7003] [depth= 15] . ( 7 sec) [ -47187.4196] [ 6992] [depth= 1] . ( 7 sec) [ -47053.8273] [ 6987] [depth= 10] . ( 7 sec) [ -46896.4000] [ 6964] [depth= 3] . ( 8 sec) [ -46760.0247] [ 6962] [depth= 1] . ( 8 sec) [ -46692.3083] [ 6954] [depth= 4] . ( 8 sec) [ -46662.0546] [ 6951] [depth= 8] . ( 8 sec) [ -46531.7782] [ 6914] [depth= 11] . ( 8 sec) [ -46398.1543] [ 6911] [depth= 10] . ( 9 sec) [ -46207.9031] [ 6907] [depth= 3] . ( 9 sec) [ -46133.6787] [ 6906] [depth= 3] . ( 9 sec) [ -45593.8094] [ 6863] [depth= 2] . ( 9 sec) [ -45499.4626] [ 6863] [depth= 3] . ( 9 sec) [ -45457.7772] [ 6833] [depth= 1] . ( 10 sec) [ -45386.3439] [ 6831] [depth= 3] . ( 10 sec) [ -45142.2076] [ 6824] [depth= 14] . ( 10 sec) [ -45112.4663] [ 6778] [depth= 13] . ( 10 sec) [ -45073.4104] [ 6778] [depth= 1] . ( 11 sec) [ -44996.8758] [ 6761] [depth= 3] . ( 11 sec) [ -44311.7088] [ 6733] [depth= 10] . ( 11 sec) [ -44110.4834] [ 6673] [depth= 8] . ( 11 sec) [ -43943.6100] [ 6672] [depth= 12] . ( 12 sec) [ -43705.1995] [ 6616] [depth= 15] . ( 12 sec) [ -43360.9811] [ 6616] [depth= 1] . ( 12 sec) [ -42860.8947] [ 6535] [depth= 30] . ( 13 sec) [ -42718.9750] [ 6473] [depth= 10] . ( 13 sec) [ -42686.8476] [ 6466] [depth= 28] . ( 13 sec) [ -42547.7380] [ 6452] [depth= 2] . ( 13 sec) [ -42504.6245] [ 6442] [depth= 3] . ( 13 sec) [ -42438.8441] [ 6435] [depth= 27] . ( 14 sec) [ -42367.5429] [ 6434] [depth= 21] . ( 14 sec) [ -42030.8465] [ 6410] [depth= 6] . ( 14 sec) [ -41986.6268] [ 6405] [depth= 1] . ( 14 sec) [ -41910.5158] [ 6404] [depth= 4] . ( 15 sec) [ -41815.8715] [ 6404] [depth= 3] . ( 15 sec) [ -41761.5150] [ 6388] [depth= 13] . ( 15 sec) [ -41660.0378] [ 6371] [depth= 13] . ( 15 sec) [ -41599.2405] [ 6374] [depth= 1] . ( 16 sec) [ -41512.6054] [ 6369] [depth= 14] . ( 16 sec) [ -41498.4441] [ 6358] [depth= 1] . ( 16 sec) [ -41360.9151] [ 6350] [depth= 9] . ( 16 sec) [ -40659.7468] [ 6344] [depth= 1] . ( 17 sec) [ -40627.7239] [ 6294] [depth= 10] . ( 17 sec) [ -40558.3617] [ 6277] [depth= 18] . ( 17 sec) [ -40401.9153] [ 6265] [depth= 6] . ( 17 sec) [ -40364.5821] [ 6258] [depth= 23] . ( 18 sec) [ -40180.8294] [ 6248] [depth= 2] . ( 18 sec) [ -40123.1896] [ 6244] [depth= 32] . ( 18 sec) [ -40006.6840] [ 6220] [depth= 4] . ( 18 sec) [ -39912.2815] [ 6187] [depth= 1] . ( 19 sec) [ -39837.7671] [ 6184] [depth= 3] . ( 19 sec) [ -39714.1227] [ 6170] [depth= 3] . ( 19 sec) [ -39567.8357] [ 6164] [depth= 31] . ( 19 sec) [ -39324.6217] [ 6114] [depth= 25] . ( 20 sec) [ -39309.8811] [ 6112] [depth= 10] . ( 20 sec) [ -38975.7922] [ 6068] [depth= 19] . ( 20 sec) [ -38881.5665] [ 6045] [depth= 1] . ( 20 sec) [ -38614.3821] [ 6031] [depth= 2] . ( 21 sec) [ -38412.4285] [ 5978] [depth= 30] . ( 21 sec) [ -38407.6199] [ 5979] [depth= 1] . ( 21 sec) [ -38405.1713] [ 5979] [depth= 1] . ( 22 sec) [ -38161.5296] [ 5906] [depth= 6] . ( 22 sec) [ -37894.7224] [ 5864] [depth= 25] . ( 22 sec) [ -37871.6369] [ 5847] [depth= 4] . ( 23 sec) [ -37826.2604] [ 5890] [depth= 1] . ( 23 sec) [ -37814.6250] [ 5898] [depth= 14] . ( 23 sec) [ -37774.4977] [ 5864] [depth= 1] . ( 24 sec) [ -37770.8130] [ 5864] [depth= 1] . ( 24 sec) [ -37640.1504] [ 5823] [depth= 18] . ( 24 sec) [ -37464.9745] [ 5801] [depth= 25] . ( 24 sec) [ -37230.1528] [ 5768] [depth= 4] . ( 25 sec) [ -37213.0174] [ 5756] [depth= 6] . ( 25 sec) [ -37105.5139] [ 5756] [depth= 6] . ( 25 sec) [ -36910.1091] [ 5713] [depth= 2] . ( 25 sec) [ -36857.9666] [ 5713] [depth= 2] . ( 25 sec) [ -36710.3459] [ 5695] [depth= 6] . ( 26 sec) [ -36360.1028] [ 5695] [depth= 1] . ( 26 sec) [ -36236.8634] [ 5668] [depth= 15] . ( 26 sec) [ -35849.4000] [ 5669] [depth= 1] . ( 26 sec) [ -35449.8841] [ 5637] [depth= 23] . ( 26 sec) [ -35143.1338] [ 5575] [depth= 43] . ( 27 sec) [ -35059.6933] [ 5575] [depth= 2] . ( 27 sec) [ -34894.8779] [ 5545] [depth= 36] . ( 27 sec) [ -34881.8639] [ 5545] [depth= 1] . ( 27 sec) [ -34823.2609] [ 5532] [depth= 15] . ( 28 sec) [ -34761.4582] [ 5532] [depth= 12] . ( 28 sec) [ -34748.1362] [ 5532] [depth= 1] . ( 28 sec) [ -34716.6886] [ 5522] [depth= 13] . ( 28 sec) [ -34642.6589] [ 5522] [depth= 2] . ( 29 sec) [ -34356.1452] [ 5477] [depth= 22] . ( 29 sec) [ -34208.5542] [ 5454] [depth= 14] . ( 29 sec) [ -34139.6427] [ 5452] [depth= 34] . ( 29 sec) [ -33818.9372] [ 5447] [depth= 20] . ( 30 sec) [ -33580.5100] [ 5405] [depth= 19] . ( 30 sec) [ -33448.1993] [ 5380] [depth= 19] . ( 30 sec) [ -33353.3542] [ 5370] [depth= 3] . ( 30 sec) [ -33288.6955] [ 5350] [depth= 20] . ( 31 sec) [ -33085.8697] [ 5328] [depth= 33] . ( 31 sec) [ -32997.8626] [ 5329] [depth= 32] . ( 31 sec) [ -32506.1600] [ 5263] [depth= 19] . ( 31 sec) [ -32483.0876] [ 5263] [depth= 13] . ( 32 sec) [ -32411.2250] [ 5251] [depth= 11] . ( 32 sec) [ -32293.0195] [ 5247] [depth= 1] . ( 32 sec) [ -32170.0257] [ 5228] [depth= 8] . ( 32 sec) [ -32167.2152] [ 5229] [depth= 2] . ( 33 sec) [ -31813.9769] [ 5222] [depth= 12] . ( 33 sec) [ -31796.8576] [ 5219] [depth= 2] . ( 33 sec) [ -31782.9829] [ 5219] [depth= 1] . ( 33 sec) [ -31779.2402] [ 5220] [depth= 1] . ( 34 sec) [ -31762.1409] [ 5220] [depth= 2] . ( 34 sec) [ -31757.7371] [ 5220] [depth= 2] . ( 34 sec) [ -31743.1236] [ 5220] [depth= 22] . ( 34 sec) [ -31741.8111] [ 5219] [depth= 3] . ( 35 sec) [ -31739.2107] [ 5218] [depth= 3] . ( 35 sec) [ -31720.1962] [ 5214] [depth= 21] . ( 35 sec) [ -31536.9571] [ 5183] [depth= 8] . ( 35 sec) [ -31404.5391] [ 5170] [depth= 31] . ( 36 sec) [ -31380.2338] [ 5171] [depth= 2] . ( 36 sec) [ -31349.6652] [ 5170] [depth= 29] . ( 36 sec) [ -31341.7684] [ 5169] [depth= 1] . ( 37 sec) [ -31288.9807] [ 5170] [depth= 10] . ( 37 sec) [ -31285.4839] [ 5171] [depth= 10] . ( 37 sec) [ -31197.0120] [ 5156] [depth= 1] . ( 37 sec) [ -31156.2513] [ 5155] [depth= 1] . ( 38 sec) [ -30451.5120] [ 5088] [depth= 29] . ( 38 sec) [ -30447.4323] [ 5101] [depth= 1] . ( 38 sec) [ -30320.2671] [ 5056] [depth= 6] . ( 38 sec) [ -30212.1124] [ 5051] [depth= 27] . ( 39 sec) [ -29807.0620] [ 5053] [depth= 1] . ( 39 sec) [ -29791.4207] [ 5053] [depth= 3] . ( 39 sec) [ -29785.4560] [ 5053] [depth= 1] . ( 39 sec) [ -29638.4059] [ 5052] [depth= 4] . ( 40 sec) [ -29440.6937] [ 5055] [depth= 1] . ( 40 sec) [ -29188.7613] [ 5050] [depth= 1] . ( 40 sec) [ -28777.8694] [ 4984] [depth= 19] . ( 40 sec) [ -28711.9063] [ 4978] [depth= 1] . ( 41 sec) [ -28702.4802] [ 4979] [depth= 1] . ( 41 sec) [ -28556.0286] [ 4978] [depth= 23] . ( 41 sec) [ -28445.3720] [ 4977] [depth= 15] . ( 41 sec) [ -28432.6582] [ 4962] [depth= 1] . ( 42 sec) [ -28431.4782] [ 4961] [depth= 1] . ( 42 sec) [ -28135.2466] [ 4918] [depth= 30] . ( 42 sec) [ -28045.9202] [ 4918] [depth= 25] . ( 42 sec) [ -27797.0688] [ 4830] [depth= 18] . ( 42 sec) [ -27768.5818] [ 4827] [depth= 1] . ( 43 sec) [ -27736.8203] [ 4819] [depth= 1] . ( 43 sec) [ -27725.5787] [ 4819] [depth= 1] . ( 43 sec) [ -27724.5033] [ 4819] [depth= 1] . ( 44 sec) [ -27669.3882] [ 4809] [depth= 13] . ( 44 sec) [ -27669.3610] [ 4809] [depth= 1] . ( 44 sec) [ -27634.5296] [ 4806] [depth= 25] . ( 44 sec) [ -27489.3997] [ 4780] [depth= 3] . ( 45 sec) [ -27167.7272] [ 4775] [depth= 25] . ( 45 sec) [ -27167.5775] [ 4776] [depth= 25] . ( 45 sec) [ -27132.1076] [ 4771] [depth= 2] . ( 45 sec) [ -26975.6419] [ 4765] [depth= 30] . ( 46 sec) [ -26781.9942] [ 4695] [depth= 31] . ( 46 sec) [ -26779.0045] [ 4689] [depth= 1] . ( 46 sec) [ -26745.7063] [ 4689] [depth= 5] . ( 46 sec) [ -26722.8402] [ 4690] [depth= 1] . ( 47 sec) [ -26648.1451] [ 4666] [depth= 6] . ( 47 sec) [ -26602.7536] [ 4664] [depth= 2] . ( 47 sec) [ -26407.6671] [ 4670] [depth= 25] . ( 47 sec) [ -26395.1442] [ 4669] [depth= 18] . ( 48 sec) [ -26244.6788] [ 4669] [depth= 27] . ( 48 sec) [ -26008.0376] [ 4622] [depth= 28] . ( 48 sec) [ -25965.3333] [ 4608] [depth= 1] . ( 48 sec) [ -25880.5494] [ 4597] [depth= 25] . ( 49 sec) [ -25506.1385] [ 4593] [depth= 1] . ( 49 sec) [ -25134.6638] [ 4533] [depth= 27] . ( 49 sec) [ -25058.9057] [ 4520] [depth= 29] . ( 50 sec) [ -24899.7907] [ 4495] [depth= 12] . ( 50 sec) [ -24895.7737] [ 4495] [depth= 1] . ( 50 sec) [ -24895.0439] [ 4495] [depth= 1] . ( 50 sec) [ -24871.1483] [ 4487] [depth= 25] . ( 51 sec) [ -24821.5580] [ 4483] [depth= 3] . ( 51 sec) [ -24820.2291] [ 4483] [depth= 17] . ( 51 sec) [ -24660.0939] [ 4430] [depth= 8] . ( 52 sec) [ -24589.7233] [ 4432] [depth= 1] . ( 52 sec) [ -24439.6388] [ 4396] [depth= 14] . ( 53 sec) [ -24245.0823] [ 4400] [depth= 8] . ( 53 sec) [ -24242.7565] [ 4401] [depth= 9] . ( 53 sec) [ -24142.1016] [ 4379] [depth= 12] . ( 53 sec) [ -24092.7621] [ 4372] [depth= 20] . ( 54 sec) [ -24091.9676] [ 4372] [depth= 1] . ( 54 sec) [ -24043.8650] [ 4372] [depth= 14] . ( 54 sec) [ -23983.7096] [ 4371] [depth= 9] . ( 55 sec) [ -23974.5309] [ 4370] [depth= 1] . ( 55 sec) [ -23943.8331] [ 4370] [depth= 2] . ( 55 sec) [ -23843.3109] [ 4342] [depth= 5] . ( 55 sec) [ -23826.8522] [ 4341] [depth= 1] . ( 56 sec) [ -23788.6288] [ 4326] [depth= 6] . ( 56 sec) [ -23153.2733] [ 4262] [depth= 11] . ( 56 sec) [ -23016.8951] [ 4240] [depth= 28] . ( 57 sec) [ -22942.4995] [ 4222] [depth= 28] . ( 57 sec) [ -22939.8963] [ 4220] [depth= 30] . ( 57 sec) [ -22925.5937] [ 4206] [depth= 7] . ( 58 sec) [ -22519.6046] [ 4207] [depth= 1] . ( 58 sec) [ -22319.3643] [ 4203] [depth= 13] . ( 58 sec) [ -22314.7941] [ 4205] [depth= 1] . ( 58 sec) [ -22313.9431] [ 4203] [depth= 1] . ( 59 sec) [ -22229.2619] [ 4192] [depth= 14] . ( 59 sec) [ -22039.1747] [ 4119] [depth= 22] . ( 59 sec) [ -21924.0306] [ 4085] [depth= 8] . ( 59 sec) [ -21870.8683] [ 4087] [depth= 3] . ( 59 sec) [ -21858.6754] [ 4085] [depth= 15] . ( 60 sec) [ -21691.8237] [ 4023] [depth= 14] . ( 60 sec) [ -21681.3786] [ 4023] [depth= 1] . ( 60 sec) [ -21559.8195] [ 3997] [depth= 4] . ( 60 sec) [ -21432.2357] [ 3989] [depth= 3] . ( 61 sec) [ -21418.3358] [ 3985] [depth= 16] . ( 61 sec) [ -21316.9955] [ 3967] [depth= 11] . ( 61 sec) [ -21285.8020] [ 3967] [depth= 14] . ( 62 sec) [ -21238.0514] [ 3930] [depth= 10] . ( 62 sec) [ -21121.0407] [ 3900] [depth= 7] . ( 62 sec) [ -21046.9126] [ 3873] [depth= 13] . ( 62 sec) [ -20963.5174] [ 3852] [depth= 5] . ( 63 sec) [ -20960.4076] [ 3855] [depth= 2] . ( 63 sec) [ -20956.2572] [ 3856] [depth= 1] . ( 63 sec) [ -20924.3068] [ 3855] [depth= 1] . ( 63 sec) [ -20871.8768] [ 3803] [depth= 19] . ( 64 sec) [ -20707.3201] [ 3771] [depth= 1] . ( 64 sec) [ -20587.3423] [ 3759] [depth= 16] . ( 64 sec) [ -20546.3655] [ 3715] [depth= 15] . ( 64 sec) [ -20391.8221] [ 3713] [depth= 3] . ( 65 sec) [ -20248.1779] [ 3694] [depth= 19] . ( 65 sec) [ -20210.9412] [ 3695] [depth= 1] . ( 65 sec) [ -20102.3785] [ 3671] [depth= 24] . ( 65 sec) [ -19925.6058] [ 3659] [depth= 9] . ( 66 sec) [ -19919.6702] [ 3659] [depth= 1] . ( 66 sec) [ -19892.2923] [ 3657] [depth= 3] . ( 66 sec) [ -19876.7110] [ 3653] [depth= 1] . ( 66 sec) [ -19843.0763] [ 3645] [depth= 11] . ( 67 sec) [ -19631.8144] [ 3594] [depth= 4] . ( 67 sec) [ -19517.5603] [ 3582] [depth= 3] . ( 67 sec) [ -19404.4737] [ 3579] [depth= 3] . ( 68 sec) [ -19372.8688] [ 3575] [depth= 4] . ( 68 sec) [ -19371.6027] [ 3575] [depth= 1] . ( 69 sec) [ -19365.7366] [ 3575] [depth= 1] . ( 69 sec) [ -19215.3551] [ 3515] [depth= 4] . ( 69 sec) [ -19205.6761] [ 3514] [depth= 13] . ( 69 sec) [ -19204.1164] [ 3515] [depth= 1] . ( 70 sec) [ -18642.8174] [ 3488] [depth= 1] . ( 70 sec) [ -18320.0844] [ 3455] [depth= 10] . ( 70 sec) [ -18189.0661] [ 3444] [depth= 1] . ( 71 sec) [ -18175.3106] [ 3444] [depth= 1] . ( 71 sec) [ -18162.9038] [ 3444] [depth= 2] . ( 71 sec) [ -18158.4962] [ 3444] [depth= 2] . ( 72 sec) [ -18132.5629] [ 3429] [depth= 10] . ( 72 sec) [ -18131.3554] [ 3432] [depth= 1] . ( 72 sec) [ -18113.8170] [ 3429] [depth= 3] . ( 72 sec) [ -17958.5985] [ 3398] [depth= 10] . ( 73 sec) [ -17940.4403] [ 3397] [depth= 7] . ( 73 sec) [ -17824.8715] [ 3342] [depth= 16] . ( 74 sec) [ -17691.2275] [ 3335] [depth= 4] . ( 74 sec) [ -17662.7856] [ 3325] [depth= 14] . ( 74 sec) [ -17636.1787] [ 3310] [depth= 6] . ( 74 sec) [ -17618.8983] [ 3310] [depth= 1] . ( 74 sec) [ -17618.2292] [ 3310] [depth= 2] . ( 75 sec) [ -17617.9400] [ 3310] [depth= 1] . ( 76 sec) [ -17549.1213] [ 3276] [depth= 9] . ( 76 sec) [ -17467.2171] [ 3268] [depth= 2] . ( 76 sec) [ -17316.8536] [ 3224] [depth= 1] . ( 76 sec) [ -17263.6094] [ 3215] [depth= 2] . ( 76 sec) [ -17249.9297] [ 3210] [depth= 1] . ( 77 sec) [ -17182.8649] [ 3208] [depth= 2] . ( 77 sec) [ -17100.7721] [ 3172] [depth= 3] . ( 77 sec) [ -17059.9582] [ 3166] [depth= 8] . ( 78 sec) [ -16873.0839] [ 3132] [depth= 20] . ( 78 sec) [ -16872.5489] [ 3132] [depth= 1] . ( 78 sec) [ -16872.3902] [ 3133] [depth= 1] . ( 78 sec) [ -16704.0390] [ 3072] [depth= 18] . ( 79 sec) [ -16698.4515] [ 3070] [depth= 3] . ( 79 sec) [ -16584.1438] [ 3045] [depth= 26] . ( 79 sec) [ -16573.2415] [ 3045] [depth= 1] . ( 79 sec) [ -16567.5366] [ 3044] [depth= 3] . ( 80 sec) [ -16546.5956] [ 3040] [depth= 2] . ( 80 sec) [ -16530.4078] [ 3038] [depth= 8] . ( 80 sec) [ -16486.0328] [ 3032] [depth= 1] . ( 81 sec) [ -16483.7786] [ 3036] [depth= 1] . ( 81 sec) [ -16482.2192] [ 3036] [depth= 1] . ( 81 sec) [ -16395.1285] [ 3018] [depth= 11] . ( 81 sec) [ -16395.0804] [ 3018] [depth= 1] . ( 82 sec) [ -16237.6514] [ 2978] [depth= 9] . ( 82 sec) [ -16219.3149] [ 2977] [depth= 1] . ( 82 sec) [ -15969.0150] [ 2972] [depth= 8] . ( 82 sec) [ -15951.8416] [ 2970] [depth= 9] . ( 83 sec) [ -15921.1928] [ 2965] [depth= 9] . ( 83 sec) [ -15860.7801] [ 2967] [depth= 1] . ( 83 sec) [ -15708.3569] [ 2918] [depth= 24] . ( 84 sec) [ -15699.6327] [ 2920] [depth= 1] . ( 84 sec) [ -15666.0431] [ 2908] [depth= 10] . ( 84 sec) [ -15626.6887] [ 2904] [depth= 5] . ( 85 sec) [ -15599.1242] [ 2908] [depth= 5] . ( 86 sec) [ -15597.8817] [ 2907] [depth= 1] . ( 86 sec) [ -15593.5669] [ 2906] [depth= 1] . ( 86 sec) [ -15584.9961] [ 2906] [depth= 2] . ( 86 sec) [ -15583.6154] [ 2909] [depth= 1] . ( 86 sec) [ -15554.3048] [ 2907] [depth= 4] . ( 87 sec) [ -15547.3685] [ 2909] [depth= 3] . ( 87 sec) [ -15537.4425] [ 2910] [depth= 6] . ( 87 sec) [ -15532.8512] [ 2909] [depth= 1] . ( 87 sec) [ -15532.7722] [ 2910] [depth= 1] . ( 88 sec) [ -15508.7062] [ 2907] [depth= 5] . ( 88 sec) [ -15501.3412] [ 2906] [depth= 9] . ( 88 sec) [ -15474.9267] [ 2900] [depth= 1] . ( 88 sec) [ -15455.9248] [ 2896] [depth= 15] . ( 89 sec) [ -15439.8229] [ 2892] [depth= 19] . ( 89 sec) [ -15438.6946] [ 2892] [depth= 2] . ( 89 sec) [ -15402.1582] [ 2888] [depth= 2] . ( 89 sec) [ -15389.6564] [ 2885] [depth= 8] . ( 90 sec) [ -15156.4611] [ 2831] [depth= 22] . ( 90 sec) [ -15151.6399] [ 2827] [depth= 11] . ( 90 sec) [ -15140.0736] [ 2822] [depth= 13] . ( 91 sec) [ -15139.4435] [ 2825] [depth= 6] . ( 91 sec) [ -15110.8695] [ 2815] [depth= 1] . ( 91 sec) [ -15094.8296] [ 2814] [depth= 2] . ( 92 sec) [ -15093.5324] [ 2814] [depth= 1] . ( 92 sec) [ -15093.1394] [ 2814] [depth= 2] . ( 92 sec) [ -15093.0460] [ 2814] [depth= 1] . ( 92 sec) [ -15088.4764] [ 2813] [depth= 1] . ( 93 sec) [ -15087.6285] [ 2813] [depth= 8] . ( 93 sec) [ -15054.8437] [ 2796] [depth= 5] . ( 93 sec) [ -15040.9281] [ 2822] [depth= 1] . ( 93 sec) [ -15008.2528] [ 2796] [depth= 1] . ( 94 sec) [ -15007.8981] [ 2798] [depth= 2] . ( 94 sec) [ -15003.4998] [ 2798] [depth= 1] . ( 94 sec) [ -15003.0173] [ 2798] [depth= 1] . ( 94 sec) [ -14977.6240] [ 2800] [depth= 11] . ( 94 sec) [ -14930.2431] [ 2798] [depth= 1] . ( 95 sec) [ -14926.5321] [ 2798] [depth= 3] . ( 95 sec) [ -14923.6917] [ 2797] [depth= 1] . ( 96 sec) [ -14817.0104] [ 2773] [depth= 17] . ( 96 sec) [ -14796.3526] [ 2767] [depth= 4] . ( 96 sec) [ -14760.5180] [ 2768] [depth= 2] . ( 96 sec) [ -14760.1913] [ 2768] [depth= 2] . ( 96 sec) [ -14736.5296] [ 2758] [depth= 12] . ( 97 sec) [ -14705.6493] [ 2755] [depth= 2] . ( 97 sec) [ -14561.1204] [ 2714] [depth= 1] . ( 97 sec) [ -14545.4521] [ 2710] [depth= 1] . ( 97 sec) [ -14500.8153] [ 2679] [depth= 1] . ( 97 sec) [ -14475.7187] [ 2679] [depth= 1] . ( 98 sec) [ -14474.0703] [ 2680] [depth= 1] . ( 98 sec) [ -14461.8604] [ 2681] [depth= 1] . ( 99 sec) [ -14460.4886] [ 2681] [depth= 1] . ( 99 sec) [ -14460.0137] [ 2681] [depth= 4] . ( 100 sec) [ -14411.8828] [ 2678] [depth= 9] . ( 101 sec) [ -14410.3069] [ 2678] [depth= 4] . ( 101 sec) [ -14401.1406] [ 2675] [depth= 2] . ( 101 sec) [ -14399.1181] [ 2675] [depth= 2] . ( 102 sec) [ -14322.4612] [ 2661] [depth= 14] . ( 102 sec) [ -14316.5886] [ 2654] [depth= 8] . ( 102 sec) [ -14314.1979] [ 2654] [depth= 5] . ( 102 sec) [ -14170.8124] [ 2652] [depth= 1] . ( 103 sec) [ -14060.6749] [ 2632] [depth= 8] . ( 103 sec) [ -14036.4859] [ 2623] [depth= 5] . ( 103 sec) [ -13971.9601] [ 2582] [depth= 8] . ( 103 sec) [ -13881.4912] [ 2581] [depth= 1] . ( 104 sec) [ -13825.8874] [ 2569] [depth= 8] . ( 104 sec) [ -13733.1873] [ 2572] [depth= 5] . ( 104 sec) [ -13619.9745] [ 2544] [depth= 9] . ( 105 sec) [ -13615.1245] [ 2544] [depth= 2] . ( 105 sec) [ -13613.2600] [ 2547] [depth= 1] . ( 105 sec) [ -13608.9948] [ 2547] [depth= 1] . ( 105 sec) [ -13578.8912] [ 2549] [depth= 2] . ( 106 sec) [ -13483.3489] [ 2510] [depth= 2] . ( 106 sec) [ -13444.6424] [ 2507] [depth= 6] . ( 106 sec) [ -13438.0465] [ 2506] [depth= 1] . ( 106 sec) [ -13434.7160] [ 2504] [depth= 1] . ( 106 sec) [ -13364.1280] [ 2488] [depth= 3] . ( 107 sec) [ -13361.0884] [ 2482] [depth= 2] . ( 107 sec) [ -13354.6627] [ 2482] [depth= 1] . ( 107 sec) [ -13256.0713] [ 2455] [depth= 3] . ( 107 sec) [ -13245.6543] [ 2449] [depth= 3] . ( 108 sec) [ -13244.5667] [ 2447] [depth= 1] . ( 108 sec) [ -13238.3149] [ 2445] [depth= 1] . ( 108 sec) [ -13230.1742] [ 2446] [depth= 8] . ( 108 sec) [ -13207.4581] [ 2445] [depth= 3] . ( 109 sec) [ -13205.8299] [ 2446] [depth= 2] . ( 109 sec) [ -13191.4871] [ 2445] [depth= 1] . ( 110 sec) [ -13183.2778] [ 2446] [depth= 1] . ( 112 sec) [ -13180.6031] [ 2446] [depth= 1] . ( 112 sec) [ -13171.2618] [ 2446] [depth= 4] . ( 113 sec) [ -13054.7879] [ 2433] [depth= 2] . ( 113 sec) [ -13043.0845] [ 2429] [depth= 1] . ( 114 sec) [ -13039.1767] [ 2429] [depth= 1] . ( 114 sec) [ -12586.7686] [ 2427] [depth= 12] . ( 114 sec) [ -12425.9841] [ 2359] [depth= 10] . ( 114 sec) [ -12396.0326] [ 2360] [depth= 1] . ( 115 sec) [ -12375.2102] [ 2358] [depth= 5] . ( 115 sec) [ -12370.9456] [ 2357] [depth= 3] . ( 115 sec) [ -12365.4860] [ 2362] [depth= 3] . ( 115 sec) [ -12353.8644] [ 2359] [depth= 15] . ( 116 sec) [ -12353.0124] [ 2360] [depth= 5] . ( 116 sec) [ -12352.0680] [ 2359] [depth= 1] . ( 116 sec) [ -12322.0440] [ 2340] [depth= 1] . ( 116 sec) [ -12319.4815] [ 2342] [depth= 7] . ( 117 sec) [ -12312.2983] [ 2341] [depth= 6] . ( 117 sec) [ -12185.1688] [ 2303] [depth= 8] . ( 117 sec) [ -12180.2811] [ 2303] [depth= 1] . ( 117 sec) [ -12175.9516] [ 2303] [depth= 1] . ( 119 sec) [ -12175.9107] [ 2303] [depth= 1] . ( 119 sec) [ -12173.5507] [ 2303] [depth= 3] . ( 122 sec) [ -11698.3259] [Branch lengths ] . ( 125 sec) [ -11653.3011] [GTR parameters ] . ( 126 sec) [ -11648.0599] [Alpha ][ 0.423362] . ( 126 sec) [ -11647.5408] [ 2302] [depth= 2] . ( 127 sec) [ -11637.7770] [ 2298] [depth= 2] . ( 128 sec) [ -11637.7525] [ 2298] [depth= 1] . ( 128 sec) [ -11552.9302] [ 2235] [depth= 20] . ( 128 sec) [ -11549.7425] [ 2235] [depth= 1] . ( 131 sec) [ -11549.1270] [ 2235] [depth= 2] . ( 131 sec) [ -11547.3920] [ 2234] [depth= 1] . ( 131 sec) [ -11544.4900] [ 2233] [depth= 4] . ( 132 sec) [ -11543.2763] [ 2233] [depth= 1] . ( 134 sec) [ -11542.0148] [ 2233] [depth= 1] . ( 136 sec) [ -11534.5403] [ 2231] [depth= 3] . ( 136 sec) [ -11534.4271] [ 2231] [depth= 1] . ( 137 sec) [ -11531.6197] [ 2233] [depth= 9] . ( 137 sec) [ -11528.2293] [ 2231] [depth= 2] . ( 137 sec) [ -11524.6454] [ 2229] [depth= 1] . ( 138 sec) [ -11495.5859] [ 2182] [depth= 19] . ( 139 sec) [ -11483.3509] [ 2182] [depth= 3] . ( 139 sec) [ -11474.5110] [ 2180] [depth= 3] . ( 140 sec) [ -11474.4931] [ 2178] [depth= 1] . ( 140 sec) [ -11470.9887] [ 2179] [depth= 1] . ( 141 sec) [ -11466.4311] [ 2178] [depth= 5] . ( 141 sec) [ -11466.0771] [ 2178] [depth= 1] . ( 142 sec) [ -11463.7716] [ 2177] [depth= 1] . ( 143 sec) [ -11462.9800] [ 2177] [depth= 1] . ( 145 sec) [ -11461.9157] [ 2177] [depth= 1] . ( 145 sec) [ -11460.0198] [ 2176] [depth= 2] . ( 145 sec) [ -11459.6049] [ 2176] [depth= 1] . ( 147 sec) [ -11459.5577] [ 2176] [depth= 1] . ( 147 sec) [ -11452.3738] [ 2175] [depth= 3] . ( 148 sec) [ -11449.9113] [ 2174] [depth= 1] . ( 149 sec) [ -11449.8593] [ 2174] [depth= 11] . ( 149 sec) [ -11448.5911] [ 2174] [depth= 1] . ( 151 sec) [ -11447.1391] [ 2172] [depth= 3] . ( 152 sec) [ -11445.2488] [ 2168] [depth= 3] . ( 152 sec) [ -11445.0997] [ 2171] [depth= 5] . ( 153 sec) [ -11436.8388] [ 2168] [depth= 3] . ( 154 sec) [ -11436.8234] [ 2168] [depth= 1] . ( 155 sec) [ -11436.6444] [ 2168] [depth= 1] . ( 156 sec) [ -11436.5973] [ 2168] [depth= 1] . ( 159 sec) [ -11427.6321] [ 2167] [depth= 2] . ( 159 sec) [ -11427.6189] [ 2167] [depth= 1] . ( 162 sec) [ -11319.2391] [ 2110] [depth= 19] . ( 162 sec) [ -11293.4696] [ 2100] [depth= 2] . ( 162 sec) [ -11272.2759] [ 2094] [depth= 2] . ( 163 sec) [ -11271.6919] [ 2094] [depth= 1] . ( 163 sec) [ -11242.2264] [ 2088] [depth= 2] . ( 163 sec) [ -11240.2292] [ 2088] [depth= 2] . ( 163 sec) [ -11239.9522] [ 2088] [depth= 3] . ( 164 sec) [ -11239.6271] [ 2088] [depth= 1] . ( 166 sec) [ -11239.6134] [ 2088] [depth= 1] . ( 167 sec) [ -11239.5892] [ 2088] [depth= 2] . ( 168 sec) [ -11237.1301] [ 2084] [depth= 1] . ( 169 sec) [ -11237.1181] [ 2084] [depth= 1] . ( 171 sec) [ -11224.0067] [ 2082] [depth= 2] . ( 172 sec) [ -11223.9031] [ 2082] [depth= 2] . ( 173 sec) [ -11222.0877] [ 2083] [depth= 1] . ( 173 sec) [ -11221.1642] [ 2082] [depth= 1] . ( 173 sec) [ -11219.6825] [ 2081] [depth= 1] . ( 174 sec) [ -11219.2017] [ 2081] [depth= 1] . ( 175 sec) [ -11219.1790] [ 2081] [depth= 1] . ( 175 sec) [ -11219.1151] [ 2076] [depth= 3] . ( 177 sec) [ -11214.4176] [ 2074] [depth= 2] . ( 177 sec) [ -11213.4585] [ 2074] [depth= 2] . ( 178 sec) [ -11213.3920] [ 2074] [depth= 2] . ( 180 sec) [ -11207.7344] [ 2069] [depth= 1] . ( 182 sec) [ -11140.5975] [ 2036] [depth= 1] . ( 182 sec) [ -11140.3151] [ 2040] [depth= 3] . ( 183 sec) [ -11013.4742] [ 1997] [depth= 15] . ( 183 sec) [ -11008.5609] [ 1997] [depth= 3] . ( 185 sec) [ -11008.2626] [ 1997] [depth= 2] . ( 186 sec) [ -11008.2222] [ 1997] [depth= 1] . ( 187 sec) [ -11005.9010] [ 1997] [depth= 1] . ( 187 sec) [ -11005.7304] [ 1997] [depth= 1] . ( 188 sec) [ -11005.3622] [ 1997] [depth= 1] . ( 189 sec) [ -11002.5079] [ 1999] [depth= 1] . ( 190 sec) [ -10999.1894] [ 1998] [depth= 1] . ( 191 sec) [ -10991.4210] [ 1989] [depth= 11] . ( 192 sec) [ -10983.6038] [ 1978] [depth= 2] . ( 192 sec) [ -10934.3328] [ 1956] [depth= 9] . ( 192 sec) [ -10925.9065] [ 1949] [depth= 7] . ( 193 sec) [ -10924.5011] [ 1939] [depth= 2] . ( 194 sec) [ -10921.7421] [ 1941] [depth= 3] . ( 194 sec) [ -10906.7410] [ 1938] [depth= 2] . ( 194 sec) [ -10903.8494] [ 1936] [depth= 1] . ( 194 sec) [ -10900.5019] [ 1938] [depth= 1] . ( 195 sec) [ -10899.5684] [ 1940] [depth= 1] . ( 197 sec) [ -10893.2936] [ 1938] [depth= 1] . ( 198 sec) [ -10892.9160] [ 1938] [depth= 3] . ( 201 sec) [ -10892.7426] [ 1943] [depth= 5] . ( 201 sec) [ -10891.4743] [ 1953] [depth= 1] . ( 202 sec) [ -10891.4053] [ 1953] [depth= 2] . ( 202 sec) [ -10880.3182] [ 1950] [depth= 4] . ( 204 sec) [ -10831.1997] [ 1938] [depth= 3] . ( 205 sec) [ -10812.3185] [ 1931] [depth= 2] . ( 205 sec) [ -10809.3036] [ 1931] [depth= 2] . ( 208 sec) [ -10809.2475] [ 1931] [depth= 2] . ( 208 sec) [ -10807.2814] [ 1930] [depth= 1] . ( 210 sec) [ -10795.1813] [ 1919] [depth= 2] . ( 210 sec) [ -10794.9767] [ 1919] [depth= 2] . ( 212 sec) [ -10794.9170] [ 1919] [depth= 1] . ( 213 sec) [ -10761.1144] [ 1910] [depth= 2] . ( 214 sec) [ -10755.7062] [ 1910] [depth= 1] . ( 214 sec) [ -10755.5446] [ 1910] [depth= 1] . ( 215 sec) [ -10748.4295] [ 1909] [depth= 2] . ( 215 sec) [ -10712.7319] [ 1905] [depth= 5] . ( 215 sec) [ -10709.3100] [ 1904] [depth= 3] . ( 218 sec) [ -10704.2039] [ 1903] [depth= 1] . ( 219 sec) [ -10704.1667] [ 1903] [depth= 1] . ( 220 sec) [ -10703.8714] [ 1903] [depth= 1] . ( 221 sec) [ -10703.8277] [ 1903] [depth= 1] . ( 221 sec) [ -10703.8003] [ 1903] [depth= 1] . ( 222 sec) [ -10694.5894] [ 1905] [depth= 3] . ( 222 sec) [ -10682.8307] [ 1900] [depth= 8] . ( 224 sec) [ -10681.7409] [ 1900] [depth= 2] . ( 225 sec) [ -10673.3657] [ 1900] [depth= 1] . ( 228 sec) [ -10673.3511] [ 1900] [depth= 3] . ( 228 sec) [ -10667.9764] [ 1896] [depth= 1] . ( 228 sec) [ -10659.9754] [ 1891] [depth= 1] . ( 231 sec) [ -10659.9645] [ 1891] [depth= 1] . ( 233 sec) [ -10659.3298] [ 1891] [depth= 4] . ( 234 sec) [ -10659.2335] [ 1892] [depth= 1] . ( 234 sec) [ -10659.1604] [ 1892] [depth= 1] . ( 235 sec) [ -10659.0752] [ 1891] [depth= 1] . ( 238 sec) [ -10658.4851] [ 1891] [depth= 1] . ( 239 sec) [ -10658.0815] [ 1891] [depth= 1] . ( 242 sec) [ -10655.7747] [ 1893] [depth= 1] . ( 242 sec) [ -10653.8521] [ 1892] [depth= 1] . ( 242 sec) [ -10650.2073] [ 1892] [depth= 2] . ( 242 sec) [ -10650.1394] [ 1892] [depth= 2] . ( 244 sec) [ -10650.0934] [ 1892] [depth= 4] . ( 245 sec) [ -10648.2287] [ 1891] [depth= 3] . ( 248 sec) [ -10648.1410] [ 1891] [depth= 1] . ( 249 sec) [ -10647.2990] [ 1894] [depth= 3] . ( 251 sec) [ -10647.1875] [ 1894] [depth= 1] . ( 254 sec) [ -10647.0987] [ 1894] [depth= 1] . ( 254 sec) [ -10647.0490] [ 1894] [depth= 1] . ( 255 sec) [ -10601.2355] [Branch lengths ] . ( 258 sec) [ -10600.8544] [GTR parameters ] . ( 258 sec) [ -10597.0653] [Alpha ][ 0.494468] . ( 262 sec) [ -10594.0011] [ 1893] [depth= 2] . ( 265 sec) [ -10591.2397] [ 1892] [depth= 2] . ( 267 sec) [ -10591.0607] [ 1892] [depth= 1] . ( 272 sec) [ -10590.4746] [ 1891] [depth= 2] . ( 274 sec) [ -10588.5464] [ 1887] [depth= 1] . ( 284 sec) [ -10586.6454] [ 1886] [depth= 1] . ( 308 sec) [ -10586.5712] [ 1886] [depth= 1] . ( 314 sec) [ -10586.4948] [ 1886] [depth= 1] . ( 315 sec) [ -10583.9775] [ 1887] [depth= 1] . ( 327 sec) [ -10583.5268] [ 1889] [depth= 1] . ( 338 sec) [ -10580.5095] [ 1887] [depth= 3] . ( 339 sec) [ -10579.4852] [ 1886] [depth= 4] . ( 341 sec) [ -10577.2024] [ 1884] [depth= 3] . ( 373 sec) [ -10575.2099] [ 1881] [depth= 2] . ( 383 sec) [ -10575.0393] [ 1881] [depth= 1] . ( 389 sec) [ -10574.9004] [ 1885] [depth= 2] . ( 391 sec) [ -10574.8883] [ 1885] [depth= 1] . ( 406 sec) [ -10574.7868] [ 1886] [depth= 1] . ( 408 sec) [ -10574.6991] [ 1886] [depth= 2] . ( 411 sec) [ -10570.6206] [Branch lengths ] . ( 414 sec) [ -10570.5816] [GTR parameters ] . ( 414 sec) [ -10570.5779] [Alpha ][ 0.496944] . ( 440 sec) [ -10569.6030] [ 1885] [depth= 1] . ( 444 sec) [ -10569.0839] [ 1886] [depth= 3] . ( 493 sec) [ -10568.9580] [ 1886] [depth= 1] . ( 497 sec) [ -10567.7021] [ 1886] [depth= 3] . ( 516 sec) [ -10567.5730] [ 1886] [depth= 1] . ( 524 sec) [ -10567.4758] [ 1886] [depth= 1] . ( 561 sec) [ -10567.2494] [ 1884] [depth= 2] . ( 567 sec) [ -10563.6326] [Branch lengths ] . ( 569 sec) [ -10563.6187] [GTR parameters ] . ( 569 sec) [ -10563.6083] [Alpha ][ 0.501177] . ( 651 sec) [ -10563.5938] [ 1886] [depth= 1] . ( 726 sec) [ -10561.3869] [Branch lengths ] . ( 727 sec) [ -10561.3704] [GTR parameters ] . ( 728 sec) [ -10561.3702] [Alpha ][ 0.501699] . ( 877 sec) [ -10561.2238] [Branch lengths ] . ( 919 sec) [ -10561.1822] [ 1886] [depth= 1] . ( 1124 sec) [ -10561.1166] [Branch lengths ] . ( 1125 sec) [ -10561.1161] [GTR parameters ] . ( 1125 sec) [ -10561.1161] [Alpha ][ 0.501699] . ( 1126 sec) [ -10561.1161] [Topology ] . ( 1130 sec) [ -10561.0933] [Topology ] . ( 1135 sec) [ -10561.0827] [Topology ] . ( 1140 sec) [ -10561.0768] [Topology ] . ( 1145 sec) [ -10561.0736] [Topology ] . ( 1149 sec) [ -10561.0719] [Topology ] . ( 1154 sec) [ -10561.0711] [Topology ] . ( 1155 sec) [ -10561.0709] [GTR parameters ] . ( 1155 sec) [ -10561.0709] [Alpha ][ 0.501699] . ( 1155 sec) [ -10561.0709] [Topology ] . ( 1160 sec) [ -10561.0704] [Topology ] . ( 1161 sec) [ -10561.0704] [GTR parameters ] . ( 1161 sec) [ -10561.0704] [Alpha ][ 0.501699] . Checking for NNIs, optimizing five branches... . ( 1194 sec) [ -10561.0107] [Topology ] . Checking for NNIs, optimizing five branches... . ( 1226 sec) [ -10561.0106] [Topology ] . Checking for NNIs, optimizing five branches... . Log likelihood of the current tree: -10561.010566. . Computing pairwise distances... . Building BioNJ tree... . Maximizing likelihood (using NNI moves)... . ( 10 sec) [ -10920.5693] [GTR parameters ] . ( 11 sec) [ -10843.4467] [Alpha ][ 0.500960] . ( 11 sec) [ -10843.4467] [Topology ] . ( 16 sec) [ -10644.8145] [Topology ] . ( 22 sec) [ -10607.9159] [Topology ] . ( 27 sec) [ -10595.7401] [Topology ] . ( 32 sec) [ -10590.1961] [Topology ] . ( 37 sec) [ -10588.4493] [Topology ] . ( 42 sec) [ -10586.5619] [Topology ] . ( 47 sec) [ -10584.3708] [Topology ] . ( 52 sec) [ -10578.6510] [Topology ] . ( 56 sec) [ -10572.0697] [Topology ] . Checking for NNIs, optimizing five branches... . ( 100 sec) [ -10568.0199] [GTR parameters ] . ( 100 sec) [ -10568.0199] [Alpha ][ 0.500459] . ( 100 sec) [ -10568.0199] [Topology ] . ( 105 sec) [ -10567.7915] [Topology ] . ( 110 sec) [ -10567.6878] [Topology ] . ( 115 sec) [ -10567.5951] [Topology ] . ( 119 sec) [ -10567.4896] [Topology ] . ( 124 sec) [ -10567.3527] [Topology ] . ( 129 sec) [ -10567.2307] [Topology ] . Checking for NNIs, optimizing five branches... . ( 160 sec) [ -10567.2306] [Topology ] . ( 166 sec) [ -10567.2263] [GTR parameters ] . ( 166 sec) [ -10567.2263] [Alpha ][ 0.500959] . ( 166 sec) [ -10567.2263] [Topology ] . ( 171 sec) [ -10567.1805] [Topology ] . ( 176 sec) [ -10567.1684] [Topology ] . ( 181 sec) [ -10567.1638] [Topology ] . ( 185 sec) [ -10567.1616] [Topology ] . ( 190 sec) [ -10567.1602] [Topology ] . ( 195 sec) [ -10567.1594] [Topology ] . Checking for NNIs, optimizing five branches... . ( 226 sec) [ -10567.1593] [Topology ] . ( 230 sec) [ -10567.1588] [GTR parameters ] . ( 230 sec) [ -10567.1588] [Alpha ][ 0.500959] . ( 230 sec) [ -10567.1588] [Topology ] . ( 235 sec) [ -10567.1582] [Topology ] . Checking for NNIs, optimizing five branches... . ( 267 sec) [ -10567.1582] [GTR parameters ] . ( 267 sec) [ -10567.1582] [Alpha ][ 0.500959] . ( 267 sec) [ -10567.1582] [Topology ] . ( 272 sec) [ -10567.1578] [Topology ] . Checking for NNIs, optimizing five branches... . Checking for NNIs, optimizing five branches... . Maximizing likelihood (using SPR moves)... . ( 343 sec) [ -10920.5693] [GTR parameters ] . ( 344 sec) [ -10843.4467] [Alpha ][ 0.500960] . ( 345 sec) [ -10833.0450] [ 1899] [depth= 1] . ( 345 sec) [ -10824.3371] [ 1899] [depth= 1] . ( 346 sec) [ -10822.9897] [ 1899] [depth= 1] . ( 346 sec) [ -10791.3332] [ 1894] [depth= 4] . ( 347 sec) [ -10790.3800] [ 1899] [depth= 2] . ( 347 sec) [ -10788.1402] [ 1899] [depth= 2] . ( 348 sec) [ -10784.3954] [ 1893] [depth= 3] . ( 348 sec) [ -10783.4863] [ 1892] [depth= 1] . ( 348 sec) [ -10782.3911] [ 1895] [depth= 2] . ( 349 sec) [ -10778.1389] [ 1894] [depth= 1] . ( 349 sec) [ -10778.1003] [ 1895] [depth= 1] . ( 350 sec) [ -10776.4412] [ 1894] [depth= 1] . ( 351 sec) [ -10773.3184] [ 1897] [depth= 3] . ( 351 sec) [ -10773.2906] [ 1897] [depth= 1] . ( 352 sec) [ -10772.3624] [ 1895] [depth= 1] . ( 353 sec) [ -10771.8613] [ 1892] [depth= 2] . ( 353 sec) [ -10768.9173] [ 1895] [depth= 6] . ( 355 sec) [ -10768.5778] [ 1895] [depth= 1] . ( 355 sec) [ -10768.2604] [ 1895] [depth= 1] . ( 355 sec) [ -10768.2172] [ 1895] [depth= 1] . ( 355 sec) [ -10768.2020] [ 1895] [depth= 2] . ( 357 sec) [ -10758.7448] [ 1894] [depth= 1] . ( 358 sec) [ -10757.4991] [ 1894] [depth= 1] . ( 360 sec) [ -10754.6029] [ 1893] [depth= 1] . ( 361 sec) [ -10754.4603] [ 1893] [depth= 1] . ( 362 sec) [ -10754.1764] [ 1893] [depth= 1] . ( 362 sec) [ -10752.9864] [ 1893] [depth= 2] . ( 364 sec) [ -10752.9725] [ 1894] [depth= 1] . ( 364 sec) [ -10752.2728] [ 1893] [depth= 2] . ( 364 sec) [ -10751.7533] [ 1893] [depth= 1] . ( 365 sec) [ -10750.0196] [ 1893] [depth= 2] . ( 365 sec) [ -10749.9878] [ 1893] [depth= 1] . ( 366 sec) [ -10749.5398] [ 1893] [depth= 4] . ( 366 sec) [ -10743.0036] [ 1892] [depth= 2] . ( 366 sec) [ -10742.9142] [ 1892] [depth= 2] . ( 366 sec) [ -10742.6185] [ 1892] [depth= 1] . ( 367 sec) [ -10742.4708] [ 1892] [depth= 1] . ( 368 sec) [ -10742.4274] [ 1892] [depth= 2] . ( 371 sec) [ -10740.3783] [ 1891] [depth= 3] . ( 371 sec) [ -10739.1523] [ 1893] [depth= 1] . ( 371 sec) [ -10735.1946] [ 1893] [depth= 1] . ( 372 sec) [ -10735.1794] [ 1893] [depth= 3] . ( 373 sec) [ -10735.1476] [ 1893] [depth= 2] . ( 374 sec) [ -10733.0325] [ 1895] [depth= 1] . ( 374 sec) [ -10730.1520] [ 1897] [depth= 2] . ( 375 sec) [ -10725.0269] [ 1895] [depth= 1] . ( 376 sec) [ -10722.0972] [ 1897] [depth= 1] . ( 378 sec) [ -10720.9980] [ 1897] [depth= 1] . ( 378 sec) [ -10720.5131] [ 1897] [depth= 1] . ( 378 sec) [ -10718.0460] [ 1896] [depth= 1] . ( 381 sec) [ -10717.9519] [ 1896] [depth= 1] . ( 381 sec) [ -10717.3589] [ 1896] [depth= 1] . ( 382 sec) [ -10716.5362] [ 1896] [depth= 1] . ( 382 sec) [ -10716.1311] [ 1896] [depth= 1] . ( 383 sec) [ -10716.0787] [ 1896] [depth= 1] . ( 383 sec) [ -10715.7447] [ 1897] [depth= 1] . ( 385 sec) [ -10714.9558] [ 1897] [depth= 1] . ( 385 sec) [ -10714.4401] [ 1897] [depth= 1] . ( 388 sec) [ -10714.4055] [ 1897] [depth= 1] . ( 388 sec) [ -10714.3768] [ 1897] [depth= 1] . ( 389 sec) [ -10714.2861] [ 1897] [depth= 1] . ( 390 sec) [ -10714.2612] [ 1897] [depth= 1] . ( 390 sec) [ -10713.7522] [ 1897] [depth= 1] . ( 391 sec) [ -10713.4028] [ 1897] [depth= 1] . ( 396 sec) [ -10713.3893] [ 1897] [depth= 1] . ( 397 sec) [ -10713.2754] [ 1897] [depth= 1] . ( 397 sec) [ -10713.2400] [ 1897] [depth= 1] . ( 398 sec) [ -10713.2299] [ 1897] [depth= 1] . ( 400 sec) [ -10711.6663] [ 1897] [depth= 1] . ( 404 sec) [ -10710.7936] [ 1897] [depth= 1] . ( 404 sec) [ -10710.3317] [ 1897] [depth= 1] . ( 405 sec) [ -10710.2656] [ 1897] [depth= 1] . ( 406 sec) [ -10710.1041] [ 1897] [depth= 2] . ( 406 sec) [ -10708.7989] [ 1897] [depth= 1] . ( 406 sec) [ -10708.2067] [ 1896] [depth= 2] . ( 407 sec) [ -10708.0095] [ 1896] [depth= 1] . ( 407 sec) [ -10707.9901] [ 1897] [depth= 2] . ( 407 sec) [ -10707.9443] [ 1897] [depth= 1] . ( 408 sec) [ -10707.6909] [ 1897] [depth= 1] . ( 408 sec) [ -10707.5701] [ 1897] [depth= 2] . ( 408 sec) [ -10707.3794] [ 1897] [depth= 2] . ( 408 sec) [ -10707.0799] [ 1897] [depth= 2] . ( 409 sec) [ -10707.0545] [ 1897] [depth= 2] . ( 410 sec) [ -10706.6013] [ 1896] [depth= 2] . ( 410 sec) [ -10706.4671] [ 1896] [depth= 2] . ( 411 sec) [ -10706.4310] [ 1896] [depth= 3] . ( 411 sec) [ -10706.2125] [ 1896] [depth= 4] . ( 413 sec) [ -10705.2071] [ 1899] [depth= 1] . ( 414 sec) [ -10704.7333] [ 1901] [depth= 1] . ( 415 sec) [ -10691.1342] [ 1899] [depth= 1] . ( 416 sec) [ -10690.0068] [ 1902] [depth= 1] . ( 417 sec) [ -10689.0919] [ 1899] [depth= 2] . ( 417 sec) [ -10687.4277] [ 1898] [depth= 1] . ( 418 sec) [ -10684.6848] [ 1901] [depth= 1] . ( 418 sec) [ -10683.0017] [ 1903] [depth= 1] . ( 419 sec) [ -10679.0227] [ 1898] [depth= 1] . ( 419 sec) [ -10678.2585] [ 1897] [depth= 1] . ( 420 sec) [ -10676.2270] [ 1892] [depth= 1] . ( 421 sec) [ -10675.6161] [ 1893] [depth= 3] . ( 421 sec) [ -10669.6765] [ 1891] [depth= 1] . ( 421 sec) [ -10668.7923] [ 1892] [depth= 3] . ( 421 sec) [ -10668.5766] [ 1893] [depth= 1] . ( 422 sec) [ -10664.1686] [ 1892] [depth= 1] . ( 422 sec) [ -10663.8366] [ 1892] [depth= 1] . ( 423 sec) [ -10663.7551] [ 1892] [depth= 1] . ( 423 sec) [ -10663.5123] [ 1892] [depth= 1] . ( 424 sec) [ -10663.0611] [ 1892] [depth= 1] . ( 424 sec) [ -10663.0440] [ 1892] [depth= 2] . ( 425 sec) [ -10662.7257] [ 1892] [depth= 1] . ( 425 sec) [ -10662.6157] [ 1892] [depth= 1] . ( 425 sec) [ -10662.5804] [ 1892] [depth= 2] . ( 425 sec) [ -10662.5610] [ 1892] [depth= 1] . ( 428 sec) [ -10661.5397] [ 1892] [depth= 1] . ( 429 sec) [ -10661.2123] [ 1892] [depth= 2] . ( 429 sec) [ -10660.5062] [ 1892] [depth= 1] . ( 430 sec) [ -10660.4801] [ 1893] [depth= 1] . ( 431 sec) [ -10659.4863] [ 1892] [depth= 1] . ( 432 sec) [ -10659.4481] [ 1893] [depth= 1] . ( 433 sec) [ -10659.3935] [ 1896] [depth= 1] . ( 433 sec) [ -10657.3791] [ 1897] [depth= 4] . ( 433 sec) [ -10656.3488] [ 1898] [depth= 2] . ( 434 sec) [ -10655.1263] [ 1898] [depth= 1] . ( 434 sec) [ -10655.1072] [ 1898] [depth= 1] . ( 435 sec) [ -10654.7958] [ 1895] [depth= 3] . ( 436 sec) [ -10653.8546] [ 1899] [depth= 2] . ( 439 sec) [ -10653.4158] [ 1899] [depth= 2] . ( 439 sec) [ -10652.9693] [ 1899] [depth= 3] . ( 441 sec) [ -10652.9586] [ 1899] [depth= 1] . ( 442 sec) [ -10651.4701] [ 1899] [depth= 2] . ( 442 sec) [ -10651.0350] [ 1899] [depth= 1] . ( 443 sec) [ -10649.3589] [ 1898] [depth= 1] . ( 445 sec) [ -10649.2358] [ 1900] [depth= 2] . ( 446 sec) [ -10645.9657] [ 1895] [depth= 1] . ( 446 sec) [ -10645.7787] [ 1895] [depth= 1] . ( 449 sec) [ -10643.5554] [ 1894] [depth= 3] . ( 452 sec) [ -10643.1528] [ 1895] [depth= 2] . ( 452 sec) [ -10642.9132] [ 1895] [depth= 1] . ( 452 sec) [ -10641.2229] [ 1894] [depth= 1] . ( 455 sec) [ -10637.8641] [ 1893] [depth= 2] . ( 460 sec) [ -10637.6462] [ 1893] [depth= 1] . ( 460 sec) [ -10637.1486] [ 1893] [depth= 1] . ( 461 sec) [ -10637.0793] [ 1893] [depth= 1] . ( 461 sec) [ -10637.0417] [ 1893] [depth= 1] . ( 462 sec) [ -10636.9939] [ 1893] [depth= 2] . ( 463 sec) [ -10636.9506] [ 1893] [depth= 3] . ( 464 sec) [ -10636.9347] [ 1893] [depth= 1] . ( 471 sec) [ -10583.3989] [Branch lengths ] . ( 478 sec) [ -10581.2627] [GTR parameters ] . ( 478 sec) [ -10581.2383] [Alpha ][ 0.494606] . ( 480 sec) [ -10581.0634] [ 1896] [depth= 1] . ( 483 sec) [ -10580.7755] [ 1897] [depth= 1] . ( 484 sec) [ -10580.6856] [ 1896] [depth= 1] . ( 487 sec) [ -10577.9614] [ 1893] [depth= 3] . ( 509 sec) [ -10576.7480] [ 1893] [depth= 5] . ( 509 sec) [ -10576.6615] [ 1893] [depth= 1] . ( 510 sec) [ -10576.6351] [ 1893] [depth= 4] . ( 514 sec) [ -10576.6245] [ 1893] [depth= 3] . ( 518 sec) [ -10576.5552] [ 1892] [depth= 1] . ( 563 sec) [ -10574.7486] [ 1893] [depth= 1] . ( 564 sec) [ -10574.5257] [ 1887] [depth= 1] . ( 574 sec) [ -10574.5117] [ 1887] [depth= 1] . ( 575 sec) [ -10574.2353] [ 1887] [depth= 2] . ( 578 sec) [ -10574.1925] [ 1887] [depth= 1] . ( 613 sec) [ -10574.1799] [ 1887] [depth= 5] . ( 626 sec) [ -10565.4246] [Branch lengths ] . ( 634 sec) [ -10565.3566] [GTR parameters ] . ( 635 sec) [ -10565.3564] [Alpha ][ 0.495100] . ( 636 sec) [ -10565.2954] [ 1891] [depth= 1] . ( 637 sec) [ -10565.2020] [ 1890] [depth= 1] . ( 638 sec) [ -10565.0797] [ 1891] [depth= 1] . ( 660 sec) [ -10565.0263] [ 1891] [depth= 2] . ( 784 sec) [ -10560.6709] [Branch lengths ] . ( 790 sec) [ -10560.6545] [GTR parameters ] . ( 791 sec) [ -10560.6545] [Alpha ][ 0.494605] . ( 938 sec) [ -10559.3123] [Branch lengths ] . ( 1191 sec) [ -10559.1643] [Branch lengths ] . ( 1191 sec) [ -10559.1643] [Topology ] . ( 1196 sec) [ -10558.7606] [Topology ] . ( 1201 sec) [ -10557.2268] [Topology ] . ( 1206 sec) [ -10555.2186] [Topology ] . ( 1210 sec) [ -10554.8440] [Topology ] . ( 1215 sec) [ -10554.8062] [Topology ] . ( 1220 sec) [ -10554.7986] [Topology ] . ( 1224 sec) [ -10554.7859] [GTR parameters ] . ( 1225 sec) [ -10554.7858] [Alpha ][ 0.495100] . ( 1225 sec) [ -10554.7858] [Topology ] . ( 1229 sec) [ -10554.7833] [Topology ] . ( 1234 sec) [ -10554.7824] [Topology ] . ( 1236 sec) [ -10554.7824] [GTR parameters ] . ( 1236 sec) [ -10554.7824] [Alpha ][ 0.495100] . ( 1236 sec) [ -10554.7824] [Topology ] . ( 1241 sec) [ -10554.7819] [Topology ] . ( 1243 sec) [ -10554.7818] [GTR parameters ] . ( 1243 sec) [ -10554.7818] [Alpha ][ 0.495100] . Checking for NNIs, optimizing five branches... . ( 1275 sec) [ -10554.7813] [Topology ] . Checking for NNIs, optimizing five branches... . ( 1307 sec) [ -10554.7812] [Topology ] . Checking for NNIs, optimizing five branches... . Log likelihood obtained after NNI moves : -10567.157839 . Log likelihood obtained after SPR moves : -10554.781167 . Log likelihood of the current tree: -10554.781167. . Printing the most likely tree in file 'nucleic_M2792_166x812_2006.phy_phyml_tree.txt'... . Best log likelihood : -10554.781167 . Time used 0h22m21s oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo 7790.35user 0.00system 2:10:25elapsed 99%CPU (0avgtext+0avgdata 0maxresident)k 0inputs+0outputs (0major+0minor)pagefaults 0swaps