You are using RAxML version 7.0.4 released by Alexandros Stamatakis in April 2008 Alignment has 322 distinct alignment patterns Proportion of gaps and completely undetermined characters in this alignment: 0.403186 RAxML rapid hill-climbing mode Executing 1 inference on the original alignment using a distinct randomized MP tree All free model parameters will be estimated by RAxML GAMMA model of rate heteorgeneity, ML estimate of alpha-parameter GAMMA Model parameters will be estimated up to an accuracy of 0.1000000000 Log Likelihood units Partition: 0 Name: No Name Provided DataType: AA Substitution Matrix: WAG Fixed Base Frequencies: pi(A): 0.087000 pi(R): 0.044000 pi(N): 0.039000 pi(D): 0.057000 pi(C): 0.019000 pi(Q): 0.037000 pi(E): 0.058000 pi(G): 0.083000 pi(H): 0.024000 pi(I): 0.049000 pi(L): 0.086000 pi(K): 0.062000 pi(M): 0.020000 pi(F): 0.038000 pi(P): 0.046000 pi(S): 0.070000 pi(T): 0.061000 pi(W): 0.014000 pi(Y): 0.035000 pi(V): 0.071000 6.821371 -6947.227691 30.460301 -6923.352527 74.781269 -6919.372512 125.386653 -6919.372509 216.059697 -6912.581204 331.839564 -6912.581204 446.425146 -6912.554116 534.751003 -6912.554116 625.089449 -6912.542787 656.054301 -6912.542787 667.596434 -6912.518583 Overall Time for 1 Inference 667.626298 Likelihood : -6912.518583 Parsimony starting tree written to: /auto/dufayard/res/ori_prot_raxml/./RAxML_parsimonyTree.proteic_M1601_36x340_2003.phy_RAXML Final tree written to: /auto/dufayard/res/ori_prot_raxml/./RAxML_result.proteic_M1601_36x340_2003.phy_RAXML Execution Log File written to: /auto/dufayard/res/ori_prot_raxml/./RAxML_log.proteic_M1601_36x340_2003.phy_RAXML Execution information file written to: /auto/dufayard/res/ori_prot_raxml/./RAxML_info.proteic_M1601_36x340_2003.phy_RAXML 665.75user 0.00system 11:07.64elapsed 99%CPU (0avgtext+0avgdata 0maxresident)k 0inputs+0outputs (0major+0minor)pagefaults 0swaps