Sequence filename : 				 /auto/dufayard/res/simu_2.4.5/data1.phy
Data type :             			 dna
Sequence format : 				 interleaved
Number of data sets : 				 1
Nb of bootstrapped data sets : 			 0
Model name : 					 GTR
Proportion of invariable sites :		 0.000000
Number of subst. rate categs : 			 4
Gamma distribution parameter : 			 estimated
Starting tree : 				 BIONJ
Optimise tree topology : 			 yes
Optimise branch lengths and rate parameters : 	 yes

. Compressing sequences...

. Computing pairwise distances...

. Building BIONJ tree...

. Nbytes = 11036872

. Log(lk) :               * ->   -10719.707421 
. Log(lk) :   -10719.707421 ->   -10659.427079   6 swaps done 
. Log(lk) :   -10659.427079 ->   -10642.252789   3 swaps done 
. Log(lk) :   -10642.252789 ->   -10633.608701   2 swaps done 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -10587.007165 ->   -10584.352029   0 swap  done
. Log(lk) :   -10584.352029 ->   -10583.908526   0 swap  done
. Log(lk) :   -10583.908526 ->   -10583.747780   0 swap  done
. Log(lk) :   -10583.747780 ->   -10583.674453   0 swap  done

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -10583.596250 ->   -10583.555637   0 swap  done
. Log(lk) :   -10583.555637 ->   -10583.534372   0 swap  done

. Last optimization step...

. Log(lk) :               * ->   -10583.516098 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -10583.516098 ->   -10583.507992 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -10583.507992 ->   -10583.505883 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -10583.505883 ->   -10583.505308 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -10583.505308 ->   -10583.505153 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -10583.505153 ->   -10583.505109 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -10583.505109 ->   -10583.505097 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -10583.505097 ->   -10583.505094 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -10583.505094 ->   -10583.505093 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Final Log(lk) : -10583.505093 


. Time used 0h0m18s

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17.07user 0.00system 0:17.46elapsed 97%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+0minor)pagefaults 0swaps