Sequence filename : 				 /auto/dufayard/res/simu_2.4.5/data14.phy
Data type :             			 dna
Sequence format : 				 interleaved
Number of data sets : 				 1
Nb of bootstrapped data sets : 			 0
Model name : 					 GTR
Proportion of invariable sites :		 0.000000
Number of subst. rate categs : 			 4
Gamma distribution parameter : 			 estimated
Starting tree : 				 BIONJ
Optimise tree topology : 			 yes
Optimise branch lengths and rate parameters : 	 yes

. Compressing sequences...

. Computing pairwise distances...

. Building BIONJ tree...

. Nbytes = 9774072

. Log(lk) :               * ->    -7425.395277 
. Log(lk) :    -7425.395277 ->    -7383.133881   3 swaps done 
. Log(lk) :    -7383.133881 ->    -7376.326061   3 swaps done 
. Log(lk) :    -7376.326061 ->    -7375.112174   0 swap  done

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -7344.065408 ->    -7342.834653   0 swap  done
. Log(lk) :    -7342.834653 ->    -7342.599957   0 swap  done
. Log(lk) :    -7342.599957 ->    -7342.514726   0 swap  done
. Log(lk) :    -7342.514726 ->    -7342.477907   0 swap  done

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -7342.441006 ->    -7342.422581   0 swap  done

. Last optimization step...

. Log(lk) :               * ->    -7342.410945 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -7342.410945 ->    -7342.407117 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -7342.407117 ->    -7342.406490 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -7342.406490 ->    -7342.406378 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -7342.406378 ->    -7342.406359 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -7342.406359 ->    -7342.406355 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -7342.406355 ->    -7342.406354 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Final Log(lk) : -7342.406354 


. Time used 0h0m16s

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13.09user 0.00system 0:15.28elapsed 85%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+0minor)pagefaults 0swaps