Sequence filename : 				 /auto/dufayard/res/simu_2.4.5/data23.phy
Data type :             			 dna
Sequence format : 				 interleaved
Number of data sets : 				 1
Nb of bootstrapped data sets : 			 0
Model name : 					 GTR
Proportion of invariable sites :		 0.000000
Number of subst. rate categs : 			 4
Gamma distribution parameter : 			 estimated
Starting tree : 				 BIONJ
Optimise tree topology : 			 yes
Optimise branch lengths and rate parameters : 	 yes

. Compressing sequences...

. Computing pairwise distances...

. Building BIONJ tree...

. Nbytes = 11163152

. Log(lk) :               * ->   -11194.522764 
. Log(lk) :   -11194.522764 ->   -11129.500318   2 swaps done 
. Log(lk) :   -11129.500318 ->   -11119.933315   1 swap  done
. Log(lk) :   -11119.933315 ->   -11117.513752   1 swap  done

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -11061.018081 ->   -11058.197024   2 swaps done 
. Log(lk) :   -11058.197024 ->   -11057.586605   0 swap  done
. Log(lk) :   -11057.586605 ->   -11057.429377   0 swap  done
. Log(lk) :   -11057.429377 ->   -11057.363515   0 swap  done

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -11057.290704 ->   -11057.258804   0 swap  done
. Log(lk) :   -11057.258804 ->   -11057.243874   0 swap  done
. Log(lk) :   -11057.243874 ->   -11057.236264   0 swap  done

. Last optimization step...

. Log(lk) :               * ->   -11057.230389 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -11057.230389 ->   -11057.228207 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -11057.228207 ->   -11057.227725 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -11057.227725 ->   -11057.227609 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -11057.227609 ->   -11057.227584 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -11057.227584 ->   -11057.227577 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -11057.227577 ->   -11057.227575 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -11057.227575 ->   -11057.227575 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Final Log(lk) : -11057.227575 


. Time used 0h0m20s

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18.08user 0.00system 0:19.85elapsed 91%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+0minor)pagefaults 0swaps