Sequence filename : 				 /auto/dufayard/res/simu_2.4.5/data29.phy
Data type :             			 dna
Sequence format : 				 interleaved
Number of data sets : 				 1
Nb of bootstrapped data sets : 			 0
Model name : 					 GTR
Proportion of invariable sites :		 0.000000
Number of subst. rate categs : 			 4
Gamma distribution parameter : 			 estimated
Starting tree : 				 BIONJ
Optimise tree topology : 			 yes
Optimise branch lengths and rate parameters : 	 yes

. Compressing sequences...

. Computing pairwise distances...

. Building BIONJ tree...

. Nbytes = 11541992

. Log(lk) :               * ->   -10917.913361 
. Log(lk) :   -10917.913361 ->   -10849.762915   3 swaps done 
. Log(lk) :   -10849.762915 ->   -10837.203449   2 swaps done 
. Log(lk) :   -10837.203449 ->   -10832.999905   0 swap  done

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -10806.398322 ->   -10802.684082   1 swap  done
. Log(lk) :   -10802.684082 ->   -10801.699985   1 swap  done
. Log(lk) :   -10801.699985 ->   -10801.317168   0 swap  done
. Log(lk) :   -10801.317168 ->   -10801.120836   0 swap  done

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -10800.990700 ->   -10800.869105   0 swap  done
. Log(lk) :   -10800.869105 ->   -10800.805673   0 swap  done
. Log(lk) :   -10800.805673 ->   -10800.770073   0 swap  done
. Log(lk) :   -10800.770073 ->   -10800.749735   0 swap  done

. Last optimization step...

. Log(lk) :               * ->   -10800.732202 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -10800.732202 ->   -10800.721891 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -10800.721891 ->   -10800.719533 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -10800.719533 ->   -10800.718857 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -10800.718857 ->   -10800.718693 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -10800.718693 ->   -10800.718649 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -10800.718649 ->   -10800.718638 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -10800.718638 ->   -10800.718635 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -10800.718635 ->   -10800.718635 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Final Log(lk) : -10800.718635 


. Time used 0h0m23s

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19.59user 0.00system 0:22.91elapsed 85%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+0minor)pagefaults 0swaps