Sequence filename : 				 /auto/dufayard/res/simu_2.4.5/data3.phy
Data type :             			 dna
Sequence format : 				 interleaved
Number of data sets : 				 1
Nb of bootstrapped data sets : 			 0
Model name : 					 GTR
Proportion of invariable sites :		 0.000000
Number of subst. rate categs : 			 4
Gamma distribution parameter : 			 estimated
Starting tree : 				 BIONJ
Optimise tree topology : 			 yes
Optimise branch lengths and rate parameters : 	 yes

. Compressing sequences...

. Computing pairwise distances...

. Building BIONJ tree...

. Nbytes = 10986360

. Log(lk) :               * ->   -10838.652317 
. Log(lk) :   -10838.652317 ->   -10774.369336   1 swap  done
. Log(lk) :   -10774.369336 ->   -10768.990771   0 swap  done
. Log(lk) :   -10768.990771 ->   -10767.939097   0 swap  done

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -10710.307738 ->   -10708.072275   0 swap  done
. Log(lk) :   -10708.072275 ->   -10707.810606   0 swap  done
. Log(lk) :   -10707.810606 ->   -10707.716587   0 swap  done
. Log(lk) :   -10707.716587 ->   -10707.674242   0 swap  done

. Last optimization step...

. Log(lk) :               * ->   -10707.645636 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -10707.645636 ->   -10707.572773 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -10707.572773 ->   -10707.569509 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -10707.569509 ->   -10707.569250 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -10707.569250 ->   -10707.569230 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -10707.569230 ->   -10707.569227 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -10707.569227 ->   -10707.569227 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Final Log(lk) : -10707.569227 


. Time used 0h0m15s

%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

13.25user 0.00system 0:15.07elapsed 87%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+0minor)pagefaults 0swaps