Sequence filename : 				 /auto/dufayard/res/simu_2.4.5/data44.phy
Data type :             			 dna
Sequence format : 				 interleaved
Number of data sets : 				 1
Nb of bootstrapped data sets : 			 0
Model name : 					 GTR
Proportion of invariable sites :		 0.000000
Number of subst. rate categs : 			 4
Gamma distribution parameter : 			 estimated
Starting tree : 				 BIONJ
Optimise tree topology : 			 yes
Optimise branch lengths and rate parameters : 	 yes

. Compressing sequences...

. Computing pairwise distances...

. Building BIONJ tree...

. Nbytes = 7197960

. Log(lk) :               * ->    -4706.482583 
. Log(lk) :    -4706.482583 ->    -4697.804925   3 swaps done 
. Log(lk) :    -4697.804925 ->    -4697.166093   0 swap  done
. Log(lk) :    -4697.166093 ->    -4697.059385   0 swap  done

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -4676.377647 ->    -4676.337383   0 swap  done
. Log(lk) :    -4676.337383 ->    -4676.332432   0 swap  done
. Log(lk) :    -4676.332432 ->    -4676.331596   0 swap  done

. Last optimization step...

. Log(lk) :               * ->    -4676.331377 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -4676.331377 ->    -4676.308362 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -4676.308362 ->    -4676.308246 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -4676.308246 ->    -4676.308239 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -4676.308239 ->    -4676.308238 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Final Log(lk) : -4676.308238 


. Time used 0h0m8s

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7.76user 0.00system 0:08.71elapsed 89%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+0minor)pagefaults 0swaps