Sequence filename : 				 /auto/dufayard/res/simu_2.4.5/data46.phy
Data type :             			 dna
Sequence format : 				 interleaved
Number of data sets : 				 1
Nb of bootstrapped data sets : 			 0
Model name : 					 GTR
Proportion of invariable sites :		 0.000000
Number of subst. rate categs : 			 4
Gamma distribution parameter : 			 estimated
Starting tree : 				 BIONJ
Optimise tree topology : 			 yes
Optimise branch lengths and rate parameters : 	 yes

. Compressing sequences...

. Computing pairwise distances...

. Building BIONJ tree...

. Nbytes = 11011616

. Log(lk) :               * ->   -10480.835669 
. Log(lk) :   -10480.835669 ->   -10414.851505   1 swap  done
. Log(lk) :   -10414.851505 ->   -10407.120053   0 swap  done
. Log(lk) :   -10407.120053 ->   -10404.983301   1 swap  done

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -10356.652147 ->   -10353.742760   0 swap  done
. Log(lk) :   -10353.742760 ->   -10353.126158   0 swap  done
. Log(lk) :   -10353.126158 ->   -10352.881296   0 swap  done
. Log(lk) :   -10352.881296 ->   -10352.769151   0 swap  done

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -10352.620209 ->   -10352.566066   0 swap  done
. Log(lk) :   -10352.566066 ->   -10352.543753   0 swap  done

. Last optimization step...

. Log(lk) :               * ->   -10352.529270 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -10352.529270 ->   -10352.524344 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -10352.524344 ->   -10352.523496 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -10352.523496 ->   -10352.523271 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -10352.523271 ->   -10352.523234 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -10352.523234 ->   -10352.523224 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -10352.523224 ->   -10352.523222 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -10352.523222 ->   -10352.523222 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Final Log(lk) : -10352.523222 


. Time used 0h0m19s

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17.08user 0.00system 0:19.02elapsed 89%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+0minor)pagefaults 0swaps