Sequence filename : 				 /auto/dufayard/res/simu_2.4.5/data47.phy
Data type :             			 dna
Sequence format : 				 interleaved
Number of data sets : 				 1
Nb of bootstrapped data sets : 			 0
Model name : 					 GTR
Proportion of invariable sites :		 0.000000
Number of subst. rate categs : 			 4
Gamma distribution parameter : 			 estimated
Starting tree : 				 BIONJ
Optimise tree topology : 			 yes
Optimise branch lengths and rate parameters : 	 yes

. Compressing sequences...

. Computing pairwise distances...

. Building BIONJ tree...

. Nbytes = 7374752

. Log(lk) :               * ->    -4375.200121 
. Log(lk) :    -4375.200121 ->    -4363.280012   1 swap  done
. Log(lk) :    -4363.280012 ->    -4361.947752   0 swap  done
. Log(lk) :    -4361.947752 ->    -4361.732938   2 swaps done 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -4351.674708 ->    -4351.604411   0 swap  done
. Log(lk) :    -4351.604411 ->    -4351.593963   0 swap  done
. Log(lk) :    -4351.593963 ->    -4351.592008   0 swap  done
. Log(lk) :    -4351.592008 ->    -4351.591602   0 swap  done

. Last optimization step...

. Log(lk) :               * ->    -4351.591475 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -4351.591475 ->    -4351.579585 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -4351.579585 ->    -4351.579555 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -4351.579555 ->    -4351.579554 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Final Log(lk) : -4351.579554 


. Time used 0h0m12s

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7.88user 0.00system 0:11.46elapsed 68%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+0minor)pagefaults 0swaps