Sequence filename : 				 /auto/dufayard/res/simu_2.4.5/data49.phy
Data type :             			 dna
Sequence format : 				 interleaved
Number of data sets : 				 1
Nb of bootstrapped data sets : 			 0
Model name : 					 GTR
Proportion of invariable sites :		 0.000000
Number of subst. rate categs : 			 4
Gamma distribution parameter : 			 estimated
Starting tree : 				 BIONJ
Optimise tree topology : 			 yes
Optimise branch lengths and rate parameters : 	 yes

. Compressing sequences...

. Computing pairwise distances...

. Building BIONJ tree...

. Nbytes = 6263488

. Log(lk) :               * ->    -3495.253475 
. Log(lk) :    -3495.253475 ->    -3489.725202   3 swaps done 
. Log(lk) :    -3489.725202 ->    -3489.161157   0 swap  done
. Log(lk) :    -3489.161157 ->    -3489.064707   0 swap  done

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -3484.828288 ->    -3484.800122   0 swap  done
. Log(lk) :    -3484.800122 ->    -3484.794994   0 swap  done
. Log(lk) :    -3484.794994 ->    -3484.793907   0 swap  done
. Log(lk) :    -3484.793907 ->    -3484.793662   0 swap  done

. Last optimization step...

. Log(lk) :               * ->    -3484.793584 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -3484.793584 ->    -3484.773238 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -3484.773238 ->    -3484.773207 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -3484.773207 ->    -3484.773207 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Final Log(lk) : -3484.773207 


. Time used 0h0m8s

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7.00user 0.00system 0:09.05elapsed 77%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+0minor)pagefaults 0swaps