Sequence filename : 				 /auto/dufayard/res/simu_2.4.5/data51.phy
Data type :             			 dna
Sequence format : 				 interleaved
Number of data sets : 				 1
Nb of bootstrapped data sets : 			 0
Model name : 					 GTR
Proportion of invariable sites :		 0.000000
Number of subst. rate categs : 			 4
Gamma distribution parameter : 			 estimated
Starting tree : 				 BIONJ
Optimise tree topology : 			 yes
Optimise branch lengths and rate parameters : 	 yes

. Compressing sequences...

. Computing pairwise distances...

. Building BIONJ tree...

. Nbytes = 10102400

. Log(lk) :               * ->    -8499.523581 
. Log(lk) :    -8499.523581 ->    -8463.731320   2 swaps done 
. Log(lk) :    -8463.731320 ->    -8458.409877   0 swap  done
. Log(lk) :    -8458.409877 ->    -8457.632336   0 swap  done

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -8413.138174 ->    -8412.407503   0 swap  done
. Log(lk) :    -8412.407503 ->    -8412.284382   0 swap  done
. Log(lk) :    -8412.284382 ->    -8412.235758   0 swap  done
. Log(lk) :    -8412.235758 ->    -8412.212389   0 swap  done

. Last optimization step...

. Log(lk) :               * ->    -8412.194922 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -8412.194922 ->    -8412.184676 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -8412.184676 ->    -8412.183383 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -8412.183383 ->    -8412.183024 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -8412.183024 ->    -8412.182929 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -8412.182929 ->    -8412.182897 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -8412.182897 ->    -8412.182888 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -8412.182888 ->    -8412.182884 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -8412.182884 ->    -8412.182883 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -8412.182883 ->    -8412.182883 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Final Log(lk) : -8412.182883 


. Time used 0h0m20s

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14.55user 0.00system 0:20.60elapsed 70%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+0minor)pagefaults 0swaps