Sequence filename : 				 /auto/dufayard/res/simu_2.4.5/data52.phy
Data type :             			 dna
Sequence format : 				 interleaved
Number of data sets : 				 1
Nb of bootstrapped data sets : 			 0
Model name : 					 GTR
Proportion of invariable sites :		 0.000000
Number of subst. rate categs : 			 4
Gamma distribution parameter : 			 estimated
Starting tree : 				 BIONJ
Optimise tree topology : 			 yes
Optimise branch lengths and rate parameters : 	 yes

. Compressing sequences...

. Computing pairwise distances...

. Building BIONJ tree...

. Nbytes = 10152912

. Log(lk) :               * ->    -8248.451518 
. Log(lk) :    -8248.451518 ->    -8201.855248   3 swaps done 
. Log(lk) :    -8201.855248 ->    -8189.394172   1 swap  done
. Log(lk) :    -8189.394172 ->    -8186.422653   0 swap  done

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -8148.977142 ->    -8148.068895   0 swap  done
. Log(lk) :    -8148.068895 ->    -8147.928846   0 swap  done
. Log(lk) :    -8147.928846 ->    -8147.889089   0 swap  done
. Log(lk) :    -8147.889089 ->    -8147.875272   0 swap  done

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -8147.867620 ->    -8147.862708   0 swap  done

. Last optimization step...

. Log(lk) :               * ->    -8147.860010 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -8147.860010 ->    -8147.859414 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -8147.859414 ->    -8147.859314 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -8147.859314 ->    -8147.859296 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -8147.859296 ->    -8147.859293 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -8147.859293 ->    -8147.859292 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Final Log(lk) : -8147.859292 


. Time used 0h0m15s

%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

13.38user 0.00system 0:15.21elapsed 87%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+0minor)pagefaults 0swaps