Sequence filename : 				 /auto/dufayard/res/simu_2.4.5/data57.phy
Data type :             			 dna
Sequence format : 				 interleaved
Number of data sets : 				 1
Nb of bootstrapped data sets : 			 0
Model name : 					 GTR
Proportion of invariable sites :		 0.000000
Number of subst. rate categs : 			 4
Gamma distribution parameter : 			 estimated
Starting tree : 				 BIONJ
Optimise tree topology : 			 yes
Optimise branch lengths and rate parameters : 	 yes

. Compressing sequences...

. Computing pairwise distances...

. Building BIONJ tree...

. Nbytes = 10051888

. Log(lk) :               * ->    -7261.533528 
. Log(lk) :    -7261.533528 ->    -7230.560480   1 swap  done
. Log(lk) :    -7230.560480 ->    -7225.808031   1 swap  done
. Log(lk) :    -7225.808031 ->    -7224.872287   0 swap  done

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -7197.731390 ->    -7197.240481   0 swap  done
. Log(lk) :    -7197.240481 ->    -7197.163441   0 swap  done
. Log(lk) :    -7197.163441 ->    -7197.140467   0 swap  done
. Log(lk) :    -7197.140467 ->    -7197.132482   0 swap  done

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -7197.112070 ->    -7197.108447   0 swap  done

. Last optimization step...

. Log(lk) :               * ->    -7197.106536 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -7197.106536 ->    -7197.106171 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -7197.106171 ->    -7197.106117 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -7197.106117 ->    -7197.106110 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -7197.106110 ->    -7197.106108 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -7197.106108 ->    -7197.106108 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Final Log(lk) : -7197.106108 


. Time used 0h0m16s

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13.66user 0.00system 0:16.66elapsed 81%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+0minor)pagefaults 0swaps