Sequence filename : 				 /auto/dufayard/res/simu_2.4.5/data66.phy
Data type :             			 dna
Sequence format : 				 interleaved
Number of data sets : 				 1
Nb of bootstrapped data sets : 			 0
Model name : 					 GTR
Proportion of invariable sites :		 0.000000
Number of subst. rate categs : 			 4
Gamma distribution parameter : 			 estimated
Starting tree : 				 BIONJ
Optimise tree topology : 			 yes
Optimise branch lengths and rate parameters : 	 yes

. Compressing sequences...

. Computing pairwise distances...

. Building BIONJ tree...

. Nbytes = 11163152

. Log(lk) :               * ->   -10565.805009 
. Log(lk) :   -10565.805009 ->   -10504.257552   2 swaps done 
. Log(lk) :   -10504.257552 ->   -10493.879659   2 swaps done 
. Log(lk) :   -10493.879659 ->   -10491.768742   0 swap  done

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -10453.729512 ->   -10451.847801   0 swap  done
. Log(lk) :   -10451.847801 ->   -10451.477736   0 swap  done
. Log(lk) :   -10451.477736 ->   -10451.343132   0 swap  done
. Log(lk) :   -10451.343132 ->   -10451.285333   0 swap  done

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -10451.183529 ->   -10451.153117   0 swap  done

. Last optimization step...

. Log(lk) :               * ->   -10451.133795 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -10451.133795 ->   -10451.128297 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -10451.128297 ->   -10451.127133 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -10451.127133 ->   -10451.126870 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -10451.126870 ->   -10451.126817 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -10451.126817 ->   -10451.126806 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -10451.126806 ->   -10451.126803 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -10451.126803 ->   -10451.126803 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Final Log(lk) : -10451.126803 


. Time used 0h0m17s

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15.53user 0.00system 0:17.80elapsed 87%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+0minor)pagefaults 0swaps