Sequence filename : 				 /auto/dufayard/res/simu_2.4.5/data67.phy
Data type :             			 dna
Sequence format : 				 interleaved
Number of data sets : 				 1
Nb of bootstrapped data sets : 			 0
Model name : 					 GTR
Proportion of invariable sites :		 0.000000
Number of subst. rate categs : 			 4
Gamma distribution parameter : 			 estimated
Starting tree : 				 BIONJ
Optimise tree topology : 			 yes
Optimise branch lengths and rate parameters : 	 yes

. Compressing sequences...

. Computing pairwise distances...

. Building BIONJ tree...

. Nbytes = 9723560

. Log(lk) :               * ->    -7910.583658 
. Log(lk) :    -7910.583658 ->    -7853.565626   5 swaps done 
. Log(lk) :    -7853.565626 ->    -7843.083766   3 swaps done 
. Log(lk) :    -7843.083766 ->    -7841.195697   1 swap  done

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -7800.901767 ->    -7800.030902   0 swap  done
. Log(lk) :    -7800.030902 ->    -7799.895865   0 swap  done
. Log(lk) :    -7799.895865 ->    -7799.839642   0 swap  done
. Log(lk) :    -7799.839642 ->    -7799.813247   0 swap  done

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -7799.806629 ->    -7799.794358   0 swap  done
. Log(lk) :    -7799.794358 ->    -7799.788372   0 swap  done

. Last optimization step...

. Log(lk) :               * ->    -7799.784031 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -7799.784031 ->    -7799.782642 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -7799.782642 ->    -7799.782390 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -7799.782390 ->    -7799.782341 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -7799.782341 ->    -7799.782334 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -7799.782334 ->    -7799.782332 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -7799.782332 ->    -7799.782332 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Final Log(lk) : -7799.782332 


. Time used 0h0m17s

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14.10user 0.00system 0:17.83elapsed 79%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+0minor)pagefaults 0swaps