Sequence filename : 				 /auto/dufayard/res/simu_2.4.5/data7.phy
Data type :             			 dna
Sequence format : 				 interleaved
Number of data sets : 				 1
Nb of bootstrapped data sets : 			 0
Model name : 					 GTR
Proportion of invariable sites :		 0.000000
Number of subst. rate categs : 			 4
Gamma distribution parameter : 			 estimated
Starting tree : 				 BIONJ
Optimise tree topology : 			 yes
Optimise branch lengths and rate parameters : 	 yes

. Compressing sequences...

. Computing pairwise distances...

. Building BIONJ tree...

. Nbytes = 7273728

. Log(lk) :               * ->    -4329.967994 
. Log(lk) :    -4329.967994 ->    -4322.757823   3 swaps done 
. Log(lk) :    -4322.757823 ->    -4322.050387   0 swap  done
. Log(lk) :    -4322.050387 ->    -4321.972459   0 swap  done

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -4310.034517 ->    -4309.900982   0 swap  done
. Log(lk) :    -4309.900982 ->    -4309.883837   0 swap  done
. Log(lk) :    -4309.883837 ->    -4309.879045   0 swap  done
. Log(lk) :    -4309.879045 ->    -4309.877358   0 swap  done

. Last optimization step...

. Log(lk) :               * ->    -4309.876495 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -4309.876495 ->    -4309.832963 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -4309.832963 ->    -4309.832452 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -4309.832452 ->    -4309.832391 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -4309.832391 ->    -4309.832380 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -4309.832380 ->    -4309.832379 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -4309.832379 ->    -4309.832378 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Final Log(lk) : -4309.832378 


. Time used 0h0m10s

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9.50user 0.00system 0:10.25elapsed 92%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+0minor)pagefaults 0swaps