Sequence filename : 				 /auto/dufayard/res/simu_2.4.5/data70.phy
Data type :             			 dna
Sequence format : 				 interleaved
Number of data sets : 				 1
Nb of bootstrapped data sets : 			 0
Model name : 					 GTR
Proportion of invariable sites :		 0.000000
Number of subst. rate categs : 			 4
Gamma distribution parameter : 			 estimated
Starting tree : 				 BIONJ
Optimise tree topology : 			 yes
Optimise branch lengths and rate parameters : 	 yes

. Compressing sequences...

. Computing pairwise distances...

. Building BIONJ tree...

. Nbytes = 9167928

. Log(lk) :               * ->    -6494.093197 
. Log(lk) :    -6494.093197 ->    -6458.549264   3 swaps done 
. Log(lk) :    -6458.549264 ->    -6449.109660   2 swaps done 
. Log(lk) :    -6449.109660 ->    -6447.876211   1 swap  done

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -6416.295157 ->    -6415.322601   0 swap  done
. Log(lk) :    -6415.322601 ->    -6415.188637   0 swap  done
. Log(lk) :    -6415.188637 ->    -6415.153004   0 swap  done
. Log(lk) :    -6415.153004 ->    -6415.140379   0 swap  done

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -6415.054902 ->    -6415.049489   0 swap  done
. Log(lk) :    -6415.049489 ->    -6415.047391   0 swap  done

. Last optimization step...

. Log(lk) :               * ->    -6415.046056 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -6415.046056 ->    -6415.045620 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -6415.045620 ->    -6415.045542 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -6415.045542 ->    -6415.045530 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -6415.045530 ->    -6415.045527 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -6415.045527 ->    -6415.045527 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Final Log(lk) : -6415.045526 


. Time used 0h0m15s

%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

13.31user 0.00system 0:14.33elapsed 92%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+0minor)pagefaults 0swaps