Sequence filename : 				 /auto/dufayard/res/simu_2.4.5/data74.phy
Data type :             			 dna
Sequence format : 				 interleaved
Number of data sets : 				 1
Nb of bootstrapped data sets : 			 0
Model name : 					 GTR
Proportion of invariable sites :		 0.000000
Number of subst. rate categs : 			 4
Gamma distribution parameter : 			 estimated
Starting tree : 				 BIONJ
Optimise tree topology : 			 yes
Optimise branch lengths and rate parameters : 	 yes

. Compressing sequences...

. Computing pairwise distances...

. Building BIONJ tree...

. Nbytes = 6086696

. Log(lk) :               * ->    -3433.623611 
. Log(lk) :    -3433.623611 ->    -3429.042230   2 swaps done 
. Log(lk) :    -3429.042230 ->    -3428.703461   0 swap  done
. Log(lk) :    -3428.703461 ->    -3428.654086   0 swap  done

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -3424.721213 ->    -3424.707130   0 swap  done
. Log(lk) :    -3424.707130 ->    -3424.704869   0 swap  done
. Log(lk) :    -3424.704869 ->    -3424.704418   0 swap  done

. Last optimization step...

. Log(lk) :               * ->    -3424.704294 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -3424.704294 ->    -3424.699732 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -3424.699732 ->    -3424.699720 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -3424.699720 ->    -3424.699720 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Final Log(lk) : -3424.699720 


. Time used 0h0m7s

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5.95user 0.00system 0:06.28elapsed 94%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+0minor)pagefaults 0swaps