Sequence filename : 				 /auto/dufayard/res/simu_2.4.5/data75.phy
Data type :             			 dna
Sequence format : 				 interleaved
Number of data sets : 				 1
Nb of bootstrapped data sets : 			 0
Model name : 					 GTR
Proportion of invariable sites :		 0.000000
Number of subst. rate categs : 			 4
Gamma distribution parameter : 			 estimated
Starting tree : 				 BIONJ
Optimise tree topology : 			 yes
Optimise branch lengths and rate parameters : 	 yes

. Compressing sequences...

. Computing pairwise distances...

. Building BIONJ tree...

. Nbytes = 11415712

. Log(lk) :               * ->   -11984.015981 
. Log(lk) :   -11984.015981 ->   -11895.377647   2 swaps done 
. Log(lk) :   -11895.377647 ->   -11881.577984   1 swap  done
. Log(lk) :   -11881.577984 ->   -11878.776508   0 swap  done

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -11819.907267 ->   -11816.781797   0 swap  done
. Log(lk) :   -11816.781797 ->   -11816.190041   0 swap  done
. Log(lk) :   -11816.190041 ->   -11815.929773   0 swap  done
. Log(lk) :   -11815.929773 ->   -11815.797696   0 swap  done

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -11815.720879 ->   -11815.614504   1 swap  done
. Log(lk) :   -11815.614504 ->   -11815.492554   0 swap  done
. Log(lk) :   -11815.492554 ->   -11815.464409   0 swap  done
. Log(lk) :   -11815.464409 ->   -11815.451923   0 swap  done

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -11815.451162 ->   -11815.444523   0 swap  done
. Log(lk) :   -11815.444523 ->   -11815.440875   0 swap  done
. Log(lk) :   -11815.440875 ->   -11815.438833   0 swap  done

. Last optimization step...

. Log(lk) :               * ->   -11815.437153 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -11815.437153 ->   -11815.436308 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -11815.436308 ->   -11815.436136 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -11815.436136 ->   -11815.436091 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -11815.436091 ->   -11815.436082 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -11815.436082 ->   -11815.436080 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :   -11815.436080 ->   -11815.436080 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Final Log(lk) : -11815.436080 


. Time used 0h0m23s

%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

22.00user 0.00system 0:22.95elapsed 95%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+0minor)pagefaults 0swaps