Sequence filename : 				 /auto/dufayard/res/simu_2.4.5/data79.phy
Data type :             			 dna
Sequence format : 				 interleaved
Number of data sets : 				 1
Nb of bootstrapped data sets : 			 0
Model name : 					 GTR
Proportion of invariable sites :		 0.000000
Number of subst. rate categs : 			 4
Gamma distribution parameter : 			 estimated
Starting tree : 				 BIONJ
Optimise tree topology : 			 yes
Optimise branch lengths and rate parameters : 	 yes

. Compressing sequences...

. Computing pairwise distances...

. Building BIONJ tree...

. Nbytes = 10026632

. Log(lk) :               * ->    -8019.307578 
. Log(lk) :    -8019.307578 ->    -7972.845605   4 swaps done 
. Log(lk) :    -7972.845605 ->    -7967.635050   0 swap  done
. Log(lk) :    -7967.635050 ->    -7966.644226   0 swap  done

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -7937.191904 ->    -7936.256293   1 swap  done
. Log(lk) :    -7936.256293 ->    -7935.964017   0 swap  done
. Log(lk) :    -7935.964017 ->    -7935.766982   1 swap  done
. Log(lk) :    -7935.766982 ->    -7935.596620   1 swap  done

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -7935.534302 ->    -7935.415862   0 swap  done
. Log(lk) :    -7935.415862 ->    -7935.380425   0 swap  done
. Log(lk) :    -7935.380425 ->    -7935.360398   0 swap  done
. Log(lk) :    -7935.360398 ->    -7935.346063   0 swap  done

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -7935.345407 ->    -7935.338304   0 swap  done
. Log(lk) :    -7935.338304 ->    -7935.336104   0 swap  done

. Last optimization step...

. Log(lk) :               * ->    -7935.334904 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -7935.334904 ->    -7935.334664 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -7935.334664 ->    -7935.334604 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -7935.334604 ->    -7935.334595 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -7935.334595 ->    -7935.334594 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -7935.334594 ->    -7935.334594 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Final Log(lk) : -7935.334594 


. Time used 0h0m25s

%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

18.76user 0.00system 0:26.11elapsed 71%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+0minor)pagefaults 0swaps