Sequence filename : 				 /auto/dufayard/res/simu_2.4.5/data89.phy
Data type :             			 dna
Sequence format : 				 interleaved
Number of data sets : 				 1
Nb of bootstrapped data sets : 			 0
Model name : 					 GTR
Proportion of invariable sites :		 0.000000
Number of subst. rate categs : 			 4
Gamma distribution parameter : 			 estimated
Starting tree : 				 BIONJ
Optimise tree topology : 			 yes
Optimise branch lengths and rate parameters : 	 yes

. Compressing sequences...

. Computing pairwise distances...

. Building BIONJ tree...

. Nbytes = 9950864

. Log(lk) :               * ->    -7654.547079 
. Log(lk) :    -7654.547079 ->    -7613.462619   4 swaps done 
. Log(lk) :    -7613.462619 ->    -7609.501834   1 swap  done
. Log(lk) :    -7609.501834 ->    -7608.870579   0 swap  done

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -7580.348871 ->    -7579.757751   1 swap  done
. Log(lk) :    -7579.757751 ->    -7579.707005   0 swap  done
. Log(lk) :    -7579.707005 ->    -7579.693920   0 swap  done
. Log(lk) :    -7579.693920 ->    -7579.688968   0 swap  done

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -7579.565664 ->    -7579.561935   0 swap  done
. Log(lk) :    -7579.561935 ->    -7579.560663   0 swap  done
. Log(lk) :    -7579.560663 ->    -7579.560113   0 swap  done

. Last optimization step...

. Log(lk) :               * ->    -7579.559756 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -7579.559756 ->    -7579.559506 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -7579.559506 ->    -7579.559474 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -7579.559474 ->    -7579.559469 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -7579.559469 ->    -7579.559468 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Final Log(lk) : -7579.559468 


. Time used 0h0m16s

%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

14.76user 0.00system 0:15.91elapsed 92%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+0minor)pagefaults 0swaps