Sequence filename : 				 /auto/dufayard/res/simu_2.4.5/data92.phy
Data type :             			 dna
Sequence format : 				 interleaved
Number of data sets : 				 1
Nb of bootstrapped data sets : 			 0
Model name : 					 GTR
Proportion of invariable sites :		 0.000000
Number of subst. rate categs : 			 4
Gamma distribution parameter : 			 estimated
Starting tree : 				 BIONJ
Optimise tree topology : 			 yes
Optimise branch lengths and rate parameters : 	 yes

. Compressing sequences...

. Computing pairwise distances...

. Building BIONJ tree...

. Nbytes = 9925608

. Log(lk) :               * ->    -7992.185329 
. Log(lk) :    -7992.185329 ->    -7965.984014   2 swaps done 
. Log(lk) :    -7965.984014 ->    -7963.533326   0 swap  done
. Log(lk) :    -7963.533326 ->    -7962.892992   1 swap  done

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -7931.382103 ->    -7930.927735   0 swap  done
. Log(lk) :    -7930.927735 ->    -7930.845932   0 swap  done
. Log(lk) :    -7930.845932 ->    -7930.817046   0 swap  done
. Log(lk) :    -7930.817046 ->    -7930.804913   0 swap  done

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -7930.645441 ->    -7930.636325   0 swap  done
. Log(lk) :    -7930.636325 ->    -7930.632455   0 swap  done

. Last optimization step...

. Log(lk) :               * ->    -7930.629873 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -7930.629873 ->    -7930.629001 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -7930.629001 ->    -7930.628849 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -7930.628849 ->    -7930.628822 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -7930.628822 ->    -7930.628818 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -7930.628818 ->    -7930.628817 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Final Log(lk) : -7930.628817 


. Time used 0h0m16s

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14.57user 0.00system 0:16.15elapsed 90%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+0minor)pagefaults 0swaps