Sequence filename : 				 /auto/dufayard/res/simu_2.4.5/data94.phy
Data type :             			 dna
Sequence format : 				 interleaved
Number of data sets : 				 1
Nb of bootstrapped data sets : 			 0
Model name : 					 GTR
Proportion of invariable sites :		 0.000000
Number of subst. rate categs : 			 4
Gamma distribution parameter : 			 estimated
Starting tree : 				 BIONJ
Optimise tree topology : 			 yes
Optimise branch lengths and rate parameters : 	 yes

. Compressing sequences...

. Computing pairwise distances...

. Building BIONJ tree...

. Nbytes = 10203424

. Log(lk) :               * ->    -8244.506716 
. Log(lk) :    -8244.506716 ->    -8190.002551   4 swaps done 
. Log(lk) :    -8190.002551 ->    -8181.873481   2 swaps done 
. Log(lk) :    -8181.873481 ->    -8176.473926   1 swap  done

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -8143.188811 ->    -8134.647899   0 swap  done
. Log(lk) :    -8134.647899 ->    -8132.926418   0 swap  done
. Log(lk) :    -8132.926418 ->    -8132.630650   0 swap  done
. Log(lk) :    -8132.630650 ->    -8132.577026   0 swap  done

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -8132.552162 ->    -8132.540407   0 swap  done
. Log(lk) :    -8132.540407 ->    -8132.537794   0 swap  done

. Last optimization step...

. Log(lk) :               * ->    -8132.536941 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -8132.536941 ->    -8132.536765 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -8132.536765 ->    -8132.536733 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -8132.536733 ->    -8132.536721 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -8132.536721 ->    -8132.536706 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -8132.536706 ->    -8132.536706 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Final Log(lk) : -8132.536706 


. Time used 0h0m16s

%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

14.66user 0.00system 0:16.11elapsed 90%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+0minor)pagefaults 0swaps