Sequence filename : 				 /auto/dufayard/res/simu_2.4.5/data95.phy
Data type :             			 dna
Sequence format : 				 interleaved
Number of data sets : 				 1
Nb of bootstrapped data sets : 			 0
Model name : 					 GTR
Proportion of invariable sites :		 0.000000
Number of subst. rate categs : 			 4
Gamma distribution parameter : 			 estimated
Starting tree : 				 BIONJ
Optimise tree topology : 			 yes
Optimise branch lengths and rate parameters : 	 yes

. Compressing sequences...

. Computing pairwise distances...

. Building BIONJ tree...

. Nbytes = 10481240

. Log(lk) :               * ->    -9352.802569 
. Log(lk) :    -9352.802569 ->    -9327.155114   2 swaps done 
. Log(lk) :    -9327.155114 ->    -9323.663770   0 swap  done
. Log(lk) :    -9323.663770 ->    -9322.806628   0 swap  done

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -9293.072359 ->    -9292.441906   1 swap  done
. Log(lk) :    -9292.441906 ->    -9292.307799   0 swap  done
. Log(lk) :    -9292.307799 ->    -9292.284697   0 swap  done
. Log(lk) :    -9292.284697 ->    -9292.276735   0 swap  done

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -9292.141046 ->    -9292.136362   0 swap  done
. Log(lk) :    -9292.136362 ->    -9292.134500   0 swap  done
. Log(lk) :    -9292.134500 ->    -9292.133653   0 swap  done

. Last optimization step...

. Log(lk) :               * ->    -9292.133068 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -9292.133068 ->    -9292.132789 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -9292.132789 ->    -9292.132742 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -9292.132742 ->    -9292.132730 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -9292.132730 ->    -9292.132727 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Log(lk) :    -9292.132727 ->    -9292.132727 

. Optimisation of the GTR parameters...

. Optimisation of the gamma shape parameter...

. Final Log(lk) : -9292.132727 


. Time used 0h0m16s

%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

15.57user 0.00system 0:16.56elapsed 94%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+0minor)pagefaults 0swaps