You are using RAxML version 7.0.4 released by Alexandros Stamatakis in April 2008 Alignment has 418 distinct alignment patterns Proportion of gaps and completely undetermined characters in this alignment: 0.000000 RAxML rapid hill-climbing mode Executing 1 inference on the original alignment using a distinct randomized MP tree All free model parameters will be estimated by RAxML GAMMA model of rate heteorgeneity, ML estimate of alpha-parameter GAMMA Model parameters will be estimated up to an accuracy of 0.1000000000 Log Likelihood units Partition: 0 Name: No Name Provided DataType: DNA Substitution Matrix: GTR Empirical Base Frequencies: pi(A): 0.176600 pi(C): 0.249100 pi(G): 0.288400 pi(T): 0.285900 0.513202 -8581.669091 1.262000 -8581.669091 2.985621 -8571.047881 5.282184 -8567.983631 8.396886 -8567.031696 11.663926 -8566.658437 14.709807 -8566.562568 16.657029 -8566.477843 16.686935 -8566.477843 18.520900 -8565.697464 Overall Time for 1 Inference 18.535921 Likelihood : -8565.697464 Parsimony starting tree written to: /auto/dufayard/res/simu_raxml/./RAxML_parsimonyTree.data25.phy_RAXML Final tree written to: /auto/dufayard/res/simu_raxml/./RAxML_result.data25.phy_RAXML Execution Log File written to: /auto/dufayard/res/simu_raxml/./RAxML_log.data25.phy_RAXML Execution information file written to: /auto/dufayard/res/simu_raxml/./RAxML_info.data25.phy_RAXML