You are using RAxML version 7.0.4 released by Alexandros Stamatakis in April 2008 Alignment has 421 distinct alignment patterns Proportion of gaps and completely undetermined characters in this alignment: 0.000000 RAxML rapid hill-climbing mode Executing 1 inference on the original alignment using a distinct randomized MP tree All free model parameters will be estimated by RAxML GAMMA model of rate heteorgeneity, ML estimate of alpha-parameter GAMMA Model parameters will be estimated up to an accuracy of 0.1000000000 Log Likelihood units Partition: 0 Name: No Name Provided DataType: DNA Substitution Matrix: GTR Empirical Base Frequencies: pi(A): 0.170400 pi(C): 0.239050 pi(G): 0.329750 pi(T): 0.260800 0.484699 -9492.541776 1.181559 -9491.615668 2.924384 -9482.345501 5.328443 -9475.133855 8.718402 -9474.542711 12.218913 -9474.321965 15.234885 -9474.235531 17.440736 -9474.168510 17.491508 -9474.168510 19.176964 -9473.790307 Overall Time for 1 Inference 19.191603 Likelihood : -9473.790307 Parsimony starting tree written to: /auto/dufayard/res/simu_raxml/./RAxML_parsimonyTree.data28.phy_RAXML Final tree written to: /auto/dufayard/res/simu_raxml/./RAxML_result.data28.phy_RAXML Execution Log File written to: /auto/dufayard/res/simu_raxml/./RAxML_log.data28.phy_RAXML Execution information file written to: /auto/dufayard/res/simu_raxml/./RAxML_info.data28.phy_RAXML