You are using RAxML version 7.0.4 released by Alexandros Stamatakis in April 2008 Alignment has 380 distinct alignment patterns Proportion of gaps and completely undetermined characters in this alignment: 0.000000 RAxML rapid hill-climbing mode Executing 1 inference on the original alignment using a distinct randomized MP tree All free model parameters will be estimated by RAxML GAMMA model of rate heteorgeneity, ML estimate of alpha-parameter GAMMA Model parameters will be estimated up to an accuracy of 0.1000000000 Log Likelihood units Partition: 0 Name: No Name Provided DataType: DNA Substitution Matrix: GTR Empirical Base Frequencies: pi(A): 0.192000 pi(C): 0.245850 pi(G): 0.310450 pi(T): 0.251700 0.376177 -7209.232007 0.970191 -7191.210835 2.360484 -7184.035260 4.275198 -7181.447024 7.338427 -7180.594313 10.616389 -7180.223394 13.150602 -7180.131480 15.177869 -7179.998491 15.202208 -7179.998491 16.728779 -7179.662484 Overall Time for 1 Inference 16.743534 Likelihood : -7179.662484 Parsimony starting tree written to: /auto/dufayard/res/simu_raxml/./RAxML_parsimonyTree.data31.phy_RAXML Final tree written to: /auto/dufayard/res/simu_raxml/./RAxML_result.data31.phy_RAXML Execution Log File written to: /auto/dufayard/res/simu_raxml/./RAxML_log.data31.phy_RAXML Execution information file written to: /auto/dufayard/res/simu_raxml/./RAxML_info.data31.phy_RAXML