You are using RAxML version 7.0.4 released by Alexandros Stamatakis in April 2008 Alignment has 364 distinct alignment patterns Proportion of gaps and completely undetermined characters in this alignment: 0.000000 RAxML rapid hill-climbing mode Executing 1 inference on the original alignment using a distinct randomized MP tree All free model parameters will be estimated by RAxML GAMMA model of rate heteorgeneity, ML estimate of alpha-parameter GAMMA Model parameters will be estimated up to an accuracy of 0.1000000000 Log Likelihood units Partition: 0 Name: No Name Provided DataType: DNA Substitution Matrix: GTR Empirical Base Frequencies: pi(A): 0.190550 pi(C): 0.229150 pi(G): 0.317350 pi(T): 0.262950 0.377766 -6044.464422 0.967743 -6044.464422 2.446286 -6035.607529 4.141923 -6033.329567 6.830148 -6032.393208 9.369638 -6032.021082 10.777725 -6031.925155 10.801960 -6031.925155 12.305266 -6031.142839 Overall Time for 1 Inference 12.319120 Likelihood : -6031.142839 Parsimony starting tree written to: /auto/dufayard/res/simu_raxml/./RAxML_parsimonyTree.data32.phy_RAXML Final tree written to: /auto/dufayard/res/simu_raxml/./RAxML_result.data32.phy_RAXML Execution Log File written to: /auto/dufayard/res/simu_raxml/./RAxML_log.data32.phy_RAXML Execution information file written to: /auto/dufayard/res/simu_raxml/./RAxML_info.data32.phy_RAXML