You are using RAxML version 7.0.4 released by Alexandros Stamatakis in April 2008 Alignment has 417 distinct alignment patterns Proportion of gaps and completely undetermined characters in this alignment: 0.000000 RAxML rapid hill-climbing mode Executing 1 inference on the original alignment using a distinct randomized MP tree All free model parameters will be estimated by RAxML GAMMA model of rate heteorgeneity, ML estimate of alpha-parameter GAMMA Model parameters will be estimated up to an accuracy of 0.1000000000 Log Likelihood units Partition: 0 Name: No Name Provided DataType: DNA Substitution Matrix: GTR Empirical Base Frequencies: pi(A): 0.186500 pi(C): 0.223150 pi(G): 0.334400 pi(T): 0.255950 0.441747 -9736.541046 1.090401 -9735.333599 2.732137 -9719.675328 5.437362 -9713.082290 8.929130 -9710.838661 12.448932 -9710.408522 15.909511 -9710.192087 17.866196 -9710.099800 17.893075 -9710.099800 19.941179 -9709.191505 Overall Time for 1 Inference 19.955196 Likelihood : -9709.191505 Parsimony starting tree written to: /auto/dufayard/res/simu_raxml/./RAxML_parsimonyTree.data38.phy_RAXML Final tree written to: /auto/dufayard/res/simu_raxml/./RAxML_result.data38.phy_RAXML Execution Log File written to: /auto/dufayard/res/simu_raxml/./RAxML_log.data38.phy_RAXML Execution information file written to: /auto/dufayard/res/simu_raxml/./RAxML_info.data38.phy_RAXML