You are using RAxML version 7.0.4 released by Alexandros Stamatakis in April 2008 Alignment has 451 distinct alignment patterns Proportion of gaps and completely undetermined characters in this alignment: 0.000000 RAxML rapid hill-climbing mode Executing 1 inference on the original alignment using a distinct randomized MP tree All free model parameters will be estimated by RAxML GAMMA model of rate heteorgeneity, ML estimate of alpha-parameter GAMMA Model parameters will be estimated up to an accuracy of 0.1000000000 Log Likelihood units Partition: 0 Name: No Name Provided DataType: DNA Substitution Matrix: GTR Empirical Base Frequencies: pi(A): 0.183650 pi(C): 0.226200 pi(G): 0.322550 pi(T): 0.267600 0.580912 -10983.543297 1.369355 -10983.543297 3.249220 -10970.200827 6.079114 -10965.797000 10.577500 -10964.671252 14.948274 -10964.289814 18.761231 -10964.195193 20.761225 -10964.113053 20.790170 -10964.113053 22.798633 -10963.425306 Overall Time for 1 Inference 22.812643 Likelihood : -10963.425306 Parsimony starting tree written to: /auto/dufayard/res/simu_raxml/./RAxML_parsimonyTree.data39.phy_RAXML Final tree written to: /auto/dufayard/res/simu_raxml/./RAxML_result.data39.phy_RAXML Execution Log File written to: /auto/dufayard/res/simu_raxml/./RAxML_log.data39.phy_RAXML Execution information file written to: /auto/dufayard/res/simu_raxml/./RAxML_info.data39.phy_RAXML